RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 GRIN2BQ13224 1484 aa19.68■□□□□ 0.74
CSNK1G3-201ENST00000345990 TSPY4P0CV99 314 aa19.67■□□□□ 0.74
CSNK1G3-201ENST00000345990 TSPY10P0CW01 314 aa19.67■□□□□ 0.74
CSNK1G3-201ENST00000345990 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
CSNK1G3-201ENST00000345990 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.74
CSNK1G3-201ENST00000345990 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.73
CSNK1G3-201ENST00000345990 POLA1P09884 1462 aaPredicted RBP19.64■□□□□ 0.73
CSNK1G3-201ENST00000345990 KIF21BO75037 1637 aa19.61■□□□□ 0.73
CSNK1G3-201ENST00000345990 JPH4Q96JJ6 628 aa19.57■□□□□ 0.72
CSNK1G3-201ENST00000345990 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
CSNK1G3-201ENST00000345990 CFDP1Q9UEE9 299 aaPredicted RBP19.54■□□□□ 0.72
CSNK1G3-201ENST00000345990 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.72
CSNK1G3-201ENST00000345990 CCNB3Q8WWL7 1395 aa19.51■□□□□ 0.71
CSNK1G3-201ENST00000345990 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
CSNK1G3-201ENST00000345990 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
CSNK1G3-201ENST00000345990 CENPBP07199 599 aaPredicted RBP19.49■□□□□ 0.71
CSNK1G3-201ENST00000345990 KCNH8Q96L42 1107 aa19.48■□□□□ 0.71
CSNK1G3-201ENST00000345990 NEUROD1Q13562 356 aa19.47■□□□□ 0.71
CSNK1G3-201ENST00000345990 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
CSNK1G3-201ENST00000345990 PELP1Q8IZL8 1130 aaKnown RBP19.45■□□□□ 0.7
CSNK1G3-201ENST00000345990 ARHGAP35Q9NRY4 1499 aa19.45■□□□□ 0.7
CSNK1G3-201ENST00000345990 FHOD3Q2V2M9 1422 aa19.45■□□□□ 0.7
CSNK1G3-201ENST00000345990 ESF1Q9H501 851 aaKnown RBP19.44■□□□□ 0.7
CSNK1G3-201ENST00000345990 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
CSNK1G3-201ENST00000345990 PTPRGP23470 1445 aa19.4■□□□□ 0.7
CSNK1G3-201ENST00000345990 CHIC2Q9UKJ5 165 aa19.4■□□□□ 0.7
CSNK1G3-201ENST00000345990 CCDC18Q5T9S5 1454 aa19.39■□□□□ 0.69
CSNK1G3-201ENST00000345990 EFCAB5A4FU69 1503 aa19.39■□□□□ 0.69
CSNK1G3-201ENST00000345990 CUL7Q14999 1698 aa19.39■□□□□ 0.69
CSNK1G3-201ENST00000345990 TONSLQ96HA7 1378 aa19.35■□□□□ 0.69
CSNK1G3-201ENST00000345990 MAGI1Q96QZ7 1491 aaPredicted RBP19.34■□□□□ 0.69
CSNK1G3-201ENST00000345990 SNAPC4Q5SXM2 1469 aa19.33■□□□□ 0.69
CSNK1G3-201ENST00000345990 CLSPNQ9HAW4 1339 aa19.32■□□□□ 0.68
CSNK1G3-201ENST00000345990 RSPH4AQ5TD94 716 aa19.31■□□□□ 0.68
CSNK1G3-201ENST00000345990 EFCAB2Q5VUJ9 269 aa19.28■□□□□ 0.68
CSNK1G3-201ENST00000345990 KIAA0586Q9BVV6 1533 aa19.28■□□□□ 0.68
CSNK1G3-201ENST00000345990 PRDM2Q13029 1718 aa19.27■□□□□ 0.68
CSNK1G3-201ENST00000345990 SYNJ2O15056 1496 aa19.27■□□□□ 0.68
CSNK1G3-201ENST00000345990 RRP7BPQ9NSQ0 103 aa19.27■□□□□ 0.67
CSNK1G3-201ENST00000345990 KANK4Q5T7N3 995 aaPredicted RBP19.26■□□□□ 0.67
CSNK1G3-201ENST00000345990 POLR3GLQ9BT43 218 aa19.26■□□□□ 0.67
CSNK1G3-201ENST00000345990 CASKIN1Q8WXD9 1431 aa19.26■□□□□ 0.67
CSNK1G3-201ENST00000345990 SLC4A1APQ9BWU0 796 aaKnown RBP19.23■□□□□ 0.67
CSNK1G3-201ENST00000345990 ZNF326Q5BKZ1 582 aaKnown RBP19.21■□□□□ 0.67
CSNK1G3-201ENST00000345990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.21■□□□□ 0.67
CSNK1G3-201ENST00000345990 FYCO1Q9BQS8 1478 aa19.21■□□□□ 0.67
CSNK1G3-201ENST00000345990 ZNF316A6NFI3 1004 aaPredicted RBP19.21■□□□□ 0.67
CSNK1G3-201ENST00000345990 PRG4Q92954 1404 aaPredicted RBP19.16■□□□□ 0.66
CSNK1G3-201ENST00000345990 DIEXFQ68CQ4 756 aaKnown RBP19.16■□□□□ 0.66
CSNK1G3-201ENST00000345990 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
CSNK1G3-201ENST00000345990 STAG3Q9UJ98 1225 aa19.16■□□□□ 0.66
CSNK1G3-201ENST00000345990 SETD5Q9C0A6 1442 aa19.16■□□□□ 0.66
CSNK1G3-201ENST00000345990 WDR62O43379 1518 aa19.14■□□□□ 0.66
CSNK1G3-201ENST00000345990 IQGAP2Q13576 1575 aa19.14■□□□□ 0.66
CSNK1G3-201ENST00000345990 ANKRD30AQ9BXX3 1397 aa19.14■□□□□ 0.65
CSNK1G3-201ENST00000345990 TIMELESSQ9UNS1 1208 aa19.13■□□□□ 0.65
CSNK1G3-201ENST00000345990 WDR97A6NE52 1622 aa19.13■□□□□ 0.65
CSNK1G3-201ENST00000345990 KANK1Q14678 1352 aa19.12■□□□□ 0.65
CSNK1G3-201ENST00000345990 ARAP1Q96P48 1450 aa19.11■□□□□ 0.65
CSNK1G3-201ENST00000345990 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.64
CSNK1G3-201ENST00000345990 CHGAP10645 457 aaKnown RBP19.07■□□□□ 0.64
CSNK1G3-201ENST00000345990 ZNF608Q9ULD9 1512 aaPredicted RBP19.07■□□□□ 0.64
CSNK1G3-201ENST00000345990 LRRC9Q6ZRR7 1453 aa19.07■□□□□ 0.64
CSNK1G3-201ENST00000345990 HECW1Q76N89 1606 aa19.05■□□□□ 0.64
CSNK1G3-201ENST00000345990 NEFLP07196 543 aa19.05■□□□□ 0.64
CSNK1G3-201ENST00000345990 BCANQ96GW7 911 aa19.05■□□□□ 0.64
CSNK1G3-201ENST00000345990 ANP32CO43423 234 aa19.04■□□□□ 0.64
CSNK1G3-201ENST00000345990 MYOM3Q5VTT5 1437 aa19.02■□□□□ 0.63
CSNK1G3-201ENST00000345990 EHBP1L1Q8N3D4 1523 aa18.99■□□□□ 0.63
CSNK1G3-201ENST00000345990 MAP3K1Q13233 1512 aa18.98■□□□□ 0.63
CSNK1G3-201ENST00000345990 SPAG9O60271 1321 aaKnown RBP18.98■□□□□ 0.63
CSNK1G3-201ENST00000345990 CYB5RLQ6IPT4 315 aa18.97■□□□□ 0.63
CSNK1G3-201ENST00000345990 FGD6Q6ZV73 1430 aa18.96■□□□□ 0.63
CSNK1G3-201ENST00000345990 TRHP20396 242 aaPredicted RBP18.96■□□□□ 0.63
CSNK1G3-201ENST00000345990 ARID4BQ4LE39 1312 aaPredicted RBP18.95■□□□□ 0.62
CSNK1G3-201ENST00000345990 UACAQ9BZF9 1416 aa18.95■□□□□ 0.62
CSNK1G3-201ENST00000345990 YTHDC1Q96MU7 727 aaKnown RBP18.94■□□□□ 0.62
CSNK1G3-201ENST00000345990 TROQ12816 1431 aaPredicted RBP18.94■□□□□ 0.62
CSNK1G3-201ENST00000345990 RAB3GAP2Q9H2M9 1393 aa18.93■□□□□ 0.62
CSNK1G3-201ENST00000345990 NCOA2Q15596 1464 aa18.93■□□□□ 0.62
CSNK1G3-201ENST00000345990 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
CSNK1G3-201ENST00000345990 MIA2Q96PC5 1412 aa18.92■□□□□ 0.62
CSNK1G3-201ENST00000345990 TIAM1Q13009 1591 aa18.92■□□□□ 0.62
CSNK1G3-201ENST00000345990 EIF4G2P78344 907 aaKnown RBP eCLIP18.91■□□□□ 0.62
CSNK1G3-201ENST00000345990 HNRNPMP52272 730 aaKnown RBP eCLIP18.9■□□□□ 0.626e-6■■■■□ 20.3
CSNK1G3-201ENST00000345990 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
CSNK1G3-201ENST00000345990 SLC24A1O60721 1099 aa18.89■□□□□ 0.62
CSNK1G3-201ENST00000345990 ABCA5Q8WWZ7 1642 aa18.87■□□□□ 0.61
CSNK1G3-201ENST00000345990 EIF4G3O43432 1585 aaKnown RBP18.87■□□□□ 0.61
CSNK1G3-201ENST00000345990 EPRSP07814 1512 aaKnown RBP18.87■□□□□ 0.61
CSNK1G3-201ENST00000345990 NUP155O75694 1391 aa18.86■□□□□ 0.61
CSNK1G3-201ENST00000345990 KDM2AQ9Y2K7 1162 aa18.86■□□□□ 0.61
CSNK1G3-201ENST00000345990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.86■□□□□ 0.614e-6■■■■□ 20.1
CSNK1G3-201ENST00000345990 RRBP1Q9P2E9 1410 aaKnown RBP18.86■□□□□ 0.61
CSNK1G3-201ENST00000345990 HDGFP51858 240 aaKnown RBP18.85■□□□□ 0.61
CSNK1G3-201ENST00000345990 PHLDB1Q86UU1 1377 aa18.84■□□□□ 0.61
CSNK1G3-201ENST00000345990 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
CSNK1G3-201ENST00000345990 MPHOSPH9Q99550 1183 aa18.84■□□□□ 0.61
CSNK1G3-201ENST00000345990 PPP1R15AO75807 674 aaPredicted RBP18.83■□□□□ 0.6
CSNK1G3-201ENST00000345990 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms