RNA–Protein interactions for RNA: ENST00000345868.8

SPO11-201, Transcript of SPO11, initiator of meiotic double stranded breaks, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPO11, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPO11-201ENST00000345868 MAGI1Q96QZ7 1491 aaPredicted RBP20.41■□□□□ 0.86
SPO11-201ENST00000345868 CTTNBP2Q8WZ74 1663 aa20.35■□□□□ 0.85
SPO11-201ENST00000345868 SYNJ2O15056 1496 aa20.34■□□□□ 0.85
SPO11-201ENST00000345868 GRIN2AQ12879 1464 aa20.34■□□□□ 0.85
SPO11-201ENST00000345868 CHMP7Q8WUX9 453 aaPredicted RBP20.31■□□□□ 0.84
SPO11-201ENST00000345868 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
SPO11-201ENST00000345868 EFCAB5A4FU69 1503 aa20.29■□□□□ 0.84
SPO11-201ENST00000345868 TRIM26Q12899 539 aaPredicted RBP20.26■□□□□ 0.83
SPO11-201ENST00000345868 IQGAP2Q13576 1575 aa20.25■□□□□ 0.83
SPO11-201ENST00000345868 FBLN2P98095 1184 aa20.25■□□□□ 0.83
SPO11-201ENST00000345868 P3H3Q8IVL6 736 aa20.25■□□□□ 0.83
SPO11-201ENST00000345868 PCGF6Q9BYE7 350 aa20.24■□□□□ 0.83
SPO11-201ENST00000345868 KIAA0586Q9BVV6 1533 aa20.24■□□□□ 0.83
SPO11-201ENST00000345868 FHOD3Q2V2M9 1422 aa20.23■□□□□ 0.83
SPO11-201ENST00000345868 SAMD9Q5K651 1589 aa20.22■□□□□ 0.83
SPO11-201ENST00000345868 NUP160Q12769 1436 aa20.2■□□□□ 0.82
SPO11-201ENST00000345868 CEP170Q5SW79 1584 aa20.19■□□□□ 0.82
SPO11-201ENST00000345868 APLP2Q06481 763 aa20.19■□□□□ 0.82
SPO11-201ENST00000345868 UGGT2Q9NYU1 1516 aa20.17■□□□□ 0.82
SPO11-201ENST00000345868 TTBK1Q5TCY1 1321 aaPredicted RBP20.14■□□□□ 0.82
SPO11-201ENST00000345868 FMN1Q68DA7 1419 aa20.13■□□□□ 0.81
SPO11-201ENST00000345868 PCF11O94913 1555 aaKnown RBP20.09■□□□□ 0.81
SPO11-201ENST00000345868 CASKIN1Q8WXD9 1431 aa20.08■□□□□ 0.81
SPO11-201ENST00000345868 DISP1Q96F81 1524 aa20.08■□□□□ 0.8
SPO11-201ENST00000345868 FYCO1Q9BQS8 1478 aa20.08■□□□□ 0.8
SPO11-201ENST00000345868 JPH4Q96JJ6 628 aa20.05■□□□□ 0.8
SPO11-201ENST00000345868 MAP3K1Q13233 1512 aa20.05■□□□□ 0.8
SPO11-201ENST00000345868 KIAA0556O60303 1618 aa20.04■□□□□ 0.8
SPO11-201ENST00000345868 KANK4Q5T7N3 995 aaPredicted RBP20.04■□□□□ 0.8
SPO11-201ENST00000345868 CHD1O14646 1710 aa20.04■□□□□ 0.8
SPO11-201ENST00000345868 TIAM1Q13009 1591 aa20.01■□□□□ 0.79
SPO11-201ENST00000345868 ATP1B4Q9UN42 357 aaPredicted RBP20.01■□□□□ 0.79
SPO11-201ENST00000345868 CARMIL2Q6F5E8 1435 aa19.98■□□□□ 0.79
SPO11-201ENST00000345868 CFAP43Q8NDM7 1665 aa19.94■□□□□ 0.78
SPO11-201ENST00000345868 LRRC9Q6ZRR7 1453 aa19.94■□□□□ 0.78
SPO11-201ENST00000345868 PRG4Q92954 1404 aaPredicted RBP19.92■□□□□ 0.78
SPO11-201ENST00000345868 HECW1Q76N89 1606 aa19.89■□□□□ 0.78
SPO11-201ENST00000345868 CLASP1Q7Z460 1538 aa19.89■□□□□ 0.78
SPO11-201ENST00000345868 CCDC18Q5T9S5 1454 aa19.88■□□□□ 0.77
SPO11-201ENST00000345868 SHROOM2Q13796 1616 aa19.88■□□□□ 0.77
SPO11-201ENST00000345868 EPRSP07814 1512 aaKnown RBP19.85■□□□□ 0.77
SPO11-201ENST00000345868 HRCP23327 699 aa19.84■□□□□ 0.77
SPO11-201ENST00000345868 LRRIQ1Q96JM4 1722 aa19.84■□□□□ 0.77
SPO11-201ENST00000345868 PLB1Q6P1J6 1458 aa19.83■□□□□ 0.77
SPO11-201ENST00000345868 RAPGEF6Q8TEU7 1601 aa19.83■□□□□ 0.76
SPO11-201ENST00000345868 NUP153P49790 1475 aaKnown RBP19.83■□□□□ 0.76
SPO11-201ENST00000345868 MTUS2Q5JR59 1369 aa19.82■□□□□ 0.76
SPO11-201ENST00000345868 CDK13Q14004 1512 aaKnown RBP19.81■□□□□ 0.76
SPO11-201ENST00000345868 RRBP1Q9P2E9 1410 aaKnown RBP19.8■□□□□ 0.76
SPO11-201ENST00000345868 PTPRGP23470 1445 aa19.79■□□□□ 0.76
SPO11-201ENST00000345868 PHLDB1Q86UU1 1377 aa19.78■□□□□ 0.76
SPO11-201ENST00000345868 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
SPO11-201ENST00000345868 ERCC6L2Q5T890 1561 aa19.77■□□□□ 0.76
SPO11-201ENST00000345868 ABCA8O94911 1581 aa19.77■□□□□ 0.76
SPO11-201ENST00000345868 MAGI3Q5TCQ9 1506 aa19.77■□□□□ 0.75
SPO11-201ENST00000345868 EHBP1L1Q8N3D4 1523 aa19.77■□□□□ 0.75
SPO11-201ENST00000345868 CCNB3Q8WWL7 1395 aa19.75■□□□□ 0.75
SPO11-201ENST00000345868 OSCARQ8IYS5 282 aa19.73■□□□□ 0.75
SPO11-201ENST00000345868 NCOA2Q15596 1464 aa19.71■□□□□ 0.75
SPO11-201ENST00000345868 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
SPO11-201ENST00000345868 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
SPO11-201ENST00000345868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.68■□□□□ 0.74
SPO11-201ENST00000345868 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
SPO11-201ENST00000345868 ARHGEF11O15085 1522 aa19.68■□□□□ 0.74
SPO11-201ENST00000345868 CDK11AQ9UQ88 783 aaPredicted RBP19.68■□□□□ 0.74
SPO11-201ENST00000345868 SUPT6HQ7KZ85 1726 aaKnown RBP19.66■□□□□ 0.74
SPO11-201ENST00000345868 ATP10BO94823 1461 aa19.65■□□□□ 0.74
SPO11-201ENST00000345868 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
SPO11-201ENST00000345868 TROQ12816 1431 aaPredicted RBP19.63■□□□□ 0.73
SPO11-201ENST00000345868 MYOM3Q5VTT5 1437 aa19.63■□□□□ 0.73
SPO11-201ENST00000345868 ABCC2Q92887 1545 aa19.61■□□□□ 0.73
SPO11-201ENST00000345868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.59■□□□□ 0.73
SPO11-201ENST00000345868 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
SPO11-201ENST00000345868 UHRF1BP1LA0JNW5 1464 aa19.57■□□□□ 0.72
SPO11-201ENST00000345868 PLEKHD1A6NEE1 506 aa19.56■□□□□ 0.72
SPO11-201ENST00000345868 ITGAEP38570 1179 aa19.55■□□□□ 0.72
SPO11-201ENST00000345868 MIA2Q96PC5 1412 aa19.52■□□□□ 0.72
SPO11-201ENST00000345868 ADCY10Q96PN6 1610 aa19.51■□□□□ 0.71
SPO11-201ENST00000345868 KIF14Q15058 1648 aa19.5■□□□□ 0.71
SPO11-201ENST00000345868 TCOF1Q13428 1488 aaKnown RBP19.5■□□□□ 0.71
SPO11-201ENST00000345868 KDM5BQ9UGL1 1544 aa19.49■□□□□ 0.71
SPO11-201ENST00000345868 PTPN23Q9H3S7 1636 aa19.49■□□□□ 0.71
SPO11-201ENST00000345868 CCER1Q8TC90 406 aaPredicted RBP19.46■□□□□ 0.71
SPO11-201ENST00000345868 ABCC10Q5T3U5 1492 aa19.46■□□□□ 0.71
SPO11-201ENST00000345868 GPATCH8Q9UKJ3 1502 aaKnown RBP19.46■□□□□ 0.7
SPO11-201ENST00000345868 ZCCHC11Q5TAX3 1644 aaKnown RBP19.43■□□□□ 0.7
SPO11-201ENST00000345868 PTPRKQ15262 1439 aa19.42■□□□□ 0.7
SPO11-201ENST00000345868 CFDP1Q9UEE9 299 aaPredicted RBP19.4■□□□□ 0.7
SPO11-201ENST00000345868 ZEB1P37275 1124 aaPredicted RBP19.4■□□□□ 0.7
SPO11-201ENST00000345868 ITSN2Q9NZM3 1697 aa19.38■□□□□ 0.69
SPO11-201ENST00000345868 ZNF644Q9H582 1327 aaPredicted RBP19.38■□□□□ 0.69
SPO11-201ENST00000345868 SETD5Q9C0A6 1442 aa19.38■□□□□ 0.69
SPO11-201ENST00000345868 RAB3GAP2Q9H2M9 1393 aa19.36■□□□□ 0.69
SPO11-201ENST00000345868 CAMSAP2Q08AD1 1489 aa19.35■□□□□ 0.69
SPO11-201ENST00000345868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.34■□□□□ 0.69
SPO11-201ENST00000345868 KCNH8Q96L42 1107 aa19.33■□□□□ 0.69
SPO11-201ENST00000345868 HFM1A2PYH4 1435 aa19.32■□□□□ 0.68
SPO11-201ENST00000345868 DAPK1P53355 1430 aa19.32■□□□□ 0.68
SPO11-201ENST00000345868 CDC42BPAQ5VT25 1732 aa19.32■□□□□ 0.68
SPO11-201ENST00000345868 ZNF777Q9ULD5 760 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms