RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.25
RNF41-201ENST00000345093 DAXXQ9UER7 740 aaPredicted RBP13.47□□□□□ -0.25
RNF41-201ENST00000345093 EIF4G1Q04637 1599 aaKnown RBP13.46□□□□□ -0.25
RNF41-201ENST00000345093 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
RNF41-201ENST00000345093 TONSLQ96HA7 1378 aa13.43□□□□□ -0.26
RNF41-201ENST00000345093 HAP1P54257 671 aaPredicted RBP13.42□□□□□ -0.26
RNF41-201ENST00000345093 SMARCA4P51532 1647 aa13.41□□□□□ -0.26
RNF41-201ENST00000345093 CCNB3Q8WWL7 1395 aa13.41□□□□□ -0.26
RNF41-201ENST00000345093 NPM2Q86SE8 214 aaKnown RBP13.4□□□□□ -0.26
RNF41-201ENST00000345093 CEP162Q5TB80 1403 aa13.4□□□□□ -0.26
RNF41-201ENST00000345093 AEBP2Q6ZN18 517 aaPredicted RBP13.39□□□□□ -0.27
RNF41-201ENST00000345093 FANCD2Q9BXW9 1451 aa13.39□□□□□ -0.27
RNF41-201ENST00000345093 ANP32CO43423 234 aa13.39□□□□□ -0.27
RNF41-201ENST00000345093 NCAPD3P42695 1498 aa13.38□□□□□ -0.27
RNF41-201ENST00000345093 CDCA8Q53HL2 280 aa13.38□□□□□ -0.27
RNF41-201ENST00000345093 CCDC88BA6NC98 1476 aa13.37□□□□□ -0.27
RNF41-201ENST00000345093 EFCAB2Q5VUJ9 269 aa13.36□□□□□ -0.27
RNF41-201ENST00000345093 MROH2BQ7Z745 1585 aa13.36□□□□□ -0.27
RNF41-201ENST00000345093 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
RNF41-201ENST00000345093 FMN1Q68DA7 1419 aa13.34□□□□□ -0.27
RNF41-201ENST00000345093 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
RNF41-201ENST00000345093 GTF3C3Q9Y5Q9 886 aa13.32□□□□□ -0.28
RNF41-201ENST00000345093 CNGB1Q14028 1251 aaPredicted RBP13.3□□□□□ -0.28
RNF41-201ENST00000345093 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
RNF41-201ENST00000345093 CHIC2Q9UKJ5 165 aa13.29□□□□□ -0.28
RNF41-201ENST00000345093 TDRD9Q8NDG6 1382 aaKnown RBP13.27□□□□□ -0.29
RNF41-201ENST00000345093 MRC2Q9UBG0 1479 aa13.26□□□□□ -0.29
RNF41-201ENST00000345093 RAPGEF2Q9Y4G8 1499 aa13.24□□□□□ -0.29
RNF41-201ENST00000345093 JPH4Q96JJ6 628 aa13.22□□□□□ -0.29
RNF41-201ENST00000345093 EID1Q9Y6B2 187 aa13.22□□□□□ -0.29
RNF41-201ENST00000345093 HMGXB3Q12766 1538 aa13.22□□□□□ -0.29
RNF41-201ENST00000345093 IFT140Q96RY7 1462 aa13.21□□□□□ -0.29
RNF41-201ENST00000345093 PTPRGP23470 1445 aa13.2□□□□□ -0.3
RNF41-201ENST00000345093 POGKQ9P215 609 aa13.19□□□□□ -0.3
RNF41-201ENST00000345093 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
RNF41-201ENST00000345093 CC2D2AQ9P2K1 1620 aa13.17□□□□□ -0.3
RNF41-201ENST00000345093 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
RNF41-201ENST00000345093 CYB5RLQ6IPT4 315 aa13.15□□□□□ -0.3
RNF41-201ENST00000345093 MLECQ14165 292 aa13.15□□□□□ -0.3
RNF41-201ENST00000345093 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.3
RNF41-201ENST00000345093 GAPVD1Q14C86 1478 aa13.15□□□□□ -0.3
RNF41-201ENST00000345093 WIZO95785 1651 aa13.14□□□□□ -0.31
RNF41-201ENST00000345093 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
RNF41-201ENST00000345093 RRP7BPQ9NSQ0 103 aa13.13□□□□□ -0.31
RNF41-201ENST00000345093 TIMELESSQ9UNS1 1208 aa13.13□□□□□ -0.31
RNF41-201ENST00000345093 A0A0G2JS52 829 aa13.13□□□□□ -0.31
RNF41-201ENST00000345093 WDR43Q15061 677 aaKnown RBP eCLIP13.12□□□□□ -0.31
RNF41-201ENST00000345093 ANKRD30AQ9BXX3 1397 aa13.12□□□□□ -0.31
RNF41-201ENST00000345093 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.31
RNF41-201ENST00000345093 PNNQ9H307 717 aaKnown RBP13.12□□□□□ -0.31
RNF41-201ENST00000345093 ARHGAP35Q9NRY4 1499 aa13.12□□□□□ -0.31
RNF41-201ENST00000345093 KDM2AQ9Y2K7 1162 aa13.11□□□□□ -0.31
RNF41-201ENST00000345093 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
RNF41-201ENST00000345093 ZBTB7CA1YPR0 619 aa13.09□□□□□ -0.31
RNF41-201ENST00000345093 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.08□□□□□ -0.32
RNF41-201ENST00000345093 FOXD1Q16676 465 aa13.07□□□□□ -0.32
RNF41-201ENST00000345093 GGT6Q6P531 493 aa13.07□□□□□ -0.32
RNF41-201ENST00000345093 LAMC3Q9Y6N6 1575 aa13.07□□□□□ -0.32
RNF41-201ENST00000345093 NUDCQ9Y266 331 aa13.05□□□□□ -0.32
RNF41-201ENST00000345093 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
RNF41-201ENST00000345093 FAM69CQ0P6D2 419 aa13.04□□□□□ -0.32
RNF41-201ENST00000345093 FGD5Q6ZNL6 1462 aa13.04□□□□□ -0.32
RNF41-201ENST00000345093 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
RNF41-201ENST00000345093 CHMP4AQ9BY43 222 aa13.03□□□□□ -0.32
RNF41-201ENST00000345093 UACAQ9BZF9 1416 aa13.02□□□□□ -0.32
RNF41-201ENST00000345093 RTL5Q5HYW3 569 aaPredicted RBP13.02□□□□□ -0.33
RNF41-201ENST00000345093 CFTRP13569 1480 aa13.01□□□□□ -0.33
RNF41-201ENST00000345093 WASHC2CQ9Y4E1 1318 aa13.01□□□□□ -0.33
RNF41-201ENST00000345093 POGZQ7Z3K3 1410 aa13.01□□□□□ -0.33
RNF41-201ENST00000345093 EIF3AQ14152 1382 aaKnown RBP13□□□□□ -0.33
RNF41-201ENST00000345093 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
RNF41-201ENST00000345093 EIF5BO60841 1220 aaKnown RBP12.99□□□□□ -0.33
RNF41-201ENST00000345093 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
RNF41-201ENST00000345093 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.99□□□□□ -0.33
RNF41-201ENST00000345093 MYH16Q9H6N6 1097 aa12.99□□□□□ -0.33
RNF41-201ENST00000345093 HDGFL2Q7Z4V5 671 aaPredicted RBP12.97□□□□□ -0.33
RNF41-201ENST00000345093 KIF21BO75037 1637 aa12.96□□□□□ -0.33
RNF41-201ENST00000345093 NPHP1O15259 732 aa12.96□□□□□ -0.33
RNF41-201ENST00000345093 KIF3BO15066 747 aa12.96□□□□□ -0.34
RNF41-201ENST00000345093 CARD11Q9BXL7 1154 aa12.95□□□□□ -0.34
RNF41-201ENST00000345093 CHMP4BQ9H444 224 aaKnown RBP12.95□□□□□ -0.34
RNF41-201ENST00000345093 TMF1P82094 1093 aa12.94□□□□□ -0.34
RNF41-201ENST00000345093 SYNJ2O15056 1496 aa12.93□□□□□ -0.34
RNF41-201ENST00000345093 MAPK8IP3Q9UPT6 1336 aa12.92□□□□□ -0.34
RNF41-201ENST00000345093 MIER1Q8N108 512 aa12.91□□□□□ -0.34
RNF41-201ENST00000345093 TMX4Q9H1E5 349 aaPredicted RBP12.91□□□□□ -0.34
RNF41-201ENST00000345093 HMGB2P26583 209 aaKnown RBP12.91□□□□□ -0.34
RNF41-201ENST00000345093 DNMBPQ6XZF7 1577 aa12.91□□□□□ -0.34
RNF41-201ENST00000345093 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
RNF41-201ENST00000345093 SRPK2P78362 688 aaKnown RBP12.89□□□□□ -0.35
RNF41-201ENST00000345093 STAC3Q96MF2 364 aa12.89□□□□□ -0.35
RNF41-201ENST00000345093 ERICH3Q5RHP9 1530 aa12.89□□□□□ -0.35
RNF41-201ENST00000345093 SETD5Q9C0A6 1442 aa12.89□□□□□ -0.35
RNF41-201ENST00000345093 DCAF8L1A6NGE4 600 aa12.88□□□□□ -0.35
RNF41-201ENST00000345093 PRG4Q92954 1404 aaPredicted RBP12.87□□□□□ -0.35
RNF41-201ENST00000345093 AQRO60306 1485 aaKnown RBP eCLIP12.87□□□□□ -0.35
RNF41-201ENST00000345093 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
RNF41-201ENST00000345093 NUP155O75694 1391 aa12.86□□□□□ -0.35
RNF41-201ENST00000345093 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
RNF41-201ENST00000345093 ANP32AP39687 249 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms