RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 KIF27Q86VH2 1401 aa35.13■■■■□ 3.21
KCNQ2-201ENST00000344425 IGF1RP08069 1367 aa35.12■■■■□ 3.21
KCNQ2-201ENST00000344425 NPM1P06748 294 aaKnown RBP eCLIP35.1■■■■□ 3.21
KCNQ2-201ENST00000344425 KIAA0586Q9BVV6 1533 aa35.06■■■■□ 3.2
KCNQ2-201ENST00000344425 CUL7Q14999 1698 aa35.01■■■■□ 3.2
KCNQ2-201ENST00000344425 KIF13AQ9H1H9 1805 aa35.01■■■■□ 3.19
KCNQ2-201ENST00000344425 FAM69CQ0P6D2 419 aa34.97■■■■□ 3.19
KCNQ2-201ENST00000344425 ABCC10Q5T3U5 1492 aa34.94■■■■□ 3.18
KCNQ2-201ENST00000344425 MAPKBP1O60336 1514 aa34.92■■■■□ 3.18
KCNQ2-201ENST00000344425 CARMIL1Q5VZK9 1371 aa34.9■■■■□ 3.18
KCNQ2-201ENST00000344425 ADCY10Q96PN6 1610 aa34.88■■■■□ 3.17
KCNQ2-201ENST00000344425 PTPRGP23470 1445 aa34.8■■■■□ 3.16
KCNQ2-201ENST00000344425 DIP2BQ9P265 1576 aa34.79■■■■□ 3.16
KCNQ2-201ENST00000344425 CARMIL2Q6F5E8 1435 aa34.77■■■■□ 3.16
KCNQ2-201ENST00000344425 TNIKQ9UKE5 1360 aa34.72■■■■□ 3.15
KCNQ2-201ENST00000344425 TTBK1Q5TCY1 1321 aaPredicted RBP34.71■■■■□ 3.15
KCNQ2-201ENST00000344425 IQGAP2Q13576 1575 aa34.66■■■■□ 3.14
KCNQ2-201ENST00000344425 ABCC2Q92887 1545 aa34.6■■■■□ 3.13
KCNQ2-201ENST00000344425 KDM6BO15054 1643 aa34.56■■■■□ 3.12
KCNQ2-201ENST00000344425 RAPGEF2Q9Y4G8 1499 aa34.55■■■■□ 3.12
KCNQ2-201ENST00000344425 TSPOAP1O95153 1857 aa34.53■■■■□ 3.12
KCNQ2-201ENST00000344425 UHRF1BP1LA0JNW5 1464 aa34.53■■■■□ 3.12
KCNQ2-201ENST00000344425 UACAQ9BZF9 1416 aa34.51■■■■□ 3.12
KCNQ2-201ENST00000344425 PLB1Q6P1J6 1458 aa34.51■■■■□ 3.11
KCNQ2-201ENST00000344425 DISP1Q96F81 1524 aa34.5■■■■□ 3.11
KCNQ2-201ENST00000344425 ASXL2Q76L83 1435 aa34.5■■■■□ 3.11
KCNQ2-201ENST00000344425 UGGT2Q9NYU1 1516 aa34.44■■■■□ 3.1
KCNQ2-201ENST00000344425 GLI2P10070 1586 aa34.4■■■■□ 3.1
KCNQ2-201ENST00000344425 KDM5BQ9UGL1 1544 aa34.35■■■■□ 3.09
KCNQ2-201ENST00000344425 KIAA0556O60303 1618 aa34.33■■■■□ 3.09
KCNQ2-201ENST00000344425 KDM4FA0A1W2PPD8 638 aa34.32■■■■□ 3.08
KCNQ2-201ENST00000344425 EPRSP07814 1512 aaKnown RBP34.28■■■■□ 3.08
KCNQ2-201ENST00000344425 PPRC1Q5VV67 1664 aaKnown RBP34.26■■■■□ 3.07
KCNQ2-201ENST00000344425 ZCCHC11Q5TAX3 1644 aaKnown RBP34.23■■■■□ 3.07
KCNQ2-201ENST00000344425 GOLGA3Q08378 1498 aa34.21■■■■□ 3.07
KCNQ2-201ENST00000344425 TEX14Q8IWB6 1497 aa34.19■■■■□ 3.06
KCNQ2-201ENST00000344425 CTTNBP2Q8WZ74 1663 aa34.18■■■■□ 3.06
KCNQ2-201ENST00000344425 MAP3K4Q9Y6R4 1608 aa34.17■■■■□ 3.06
KCNQ2-201ENST00000344425 WDR7Q9Y4E6 1490 aa34.13■■■■□ 3.05
KCNQ2-201ENST00000344425 PRXQ9BXM0 1461 aa34.12■■■■□ 3.05
KCNQ2-201ENST00000344425 COL17A1Q9UMD9 1497 aaPredicted RBP34.1■■■■□ 3.05
KCNQ2-201ENST00000344425 FAM9AQ8IZU1 332 aaPredicted RBP34.05■■■■□ 3.04
KCNQ2-201ENST00000344425 ABCA8O94911 1581 aa34.03■■■■□ 3.04
KCNQ2-201ENST00000344425 KCNH8Q96L42 1107 aa34.01■■■■□ 3.03
KCNQ2-201ENST00000344425 ADGRL1O94910 1474 aa33.98■■■■□ 3.03
KCNQ2-201ENST00000344425 CD109Q6YHK3 1445 aa33.98■■■■□ 3.03
KCNQ2-201ENST00000344425 MAGI3Q5TCQ9 1506 aa33.93■■■■□ 3.02
KCNQ2-201ENST00000344425 CFAP43Q8NDM7 1665 aa33.91■■■■□ 3.02
KCNQ2-201ENST00000344425 CSRNP3Q8WYN3 585 aa33.88■■■■□ 3.01
KCNQ2-201ENST00000344425 P3H3Q8IVL6 736 aa33.87■■■■□ 3.01
KCNQ2-201ENST00000344425 ARID3CA6NKF2 412 aa33.8■■■■□ 3
KCNQ2-201ENST00000344425 ATP10BO94823 1461 aa33.78■■■■□ 3
KCNQ2-201ENST00000344425 SAMD9Q5K651 1589 aa33.71■■■□□ 2.99
KCNQ2-201ENST00000344425 EEA1Q15075 1411 aa33.7■■■□□ 2.98
KCNQ2-201ENST00000344425 ARAP3Q8WWN8 1544 aa33.68■■■□□ 2.98
KCNQ2-201ENST00000344425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.66■■■□□ 2.98
KCNQ2-201ENST00000344425 HNRNPUL2Q1KMD3 747 aaKnown RBP33.66■■■□□ 2.98
KCNQ2-201ENST00000344425 PHLDB1Q86UU1 1377 aa33.66■■■□□ 2.98
KCNQ2-201ENST00000344425 RAPGEF6Q8TEU7 1601 aa33.63■■■□□ 2.97
KCNQ2-201ENST00000344425 ABCA9Q8IUA7 1624 aa33.61■■■□□ 2.97
KCNQ2-201ENST00000344425 RANGAP1P46060 587 aaPredicted RBP33.59■■■□□ 2.97
KCNQ2-201ENST00000344425 HECW2Q9P2P5 1572 aa33.55■■■□□ 2.96
KCNQ2-201ENST00000344425 KIF21BO75037 1637 aa33.52■■■□□ 2.96
KCNQ2-201ENST00000344425 NUP153P49790 1475 aaKnown RBP33.52■■■□□ 2.96
KCNQ2-201ENST00000344425 NEO1Q92859 1461 aa33.52■■■□□ 2.96
KCNQ2-201ENST00000344425 FHOD3Q2V2M9 1422 aa33.51■■■□□ 2.96
KCNQ2-201ENST00000344425 PLEKHD1A6NEE1 506 aa33.48■■■□□ 2.95
KCNQ2-201ENST00000344425 RAPGEF3O95398 923 aa33.48■■■□□ 2.95
KCNQ2-201ENST00000344425 ILDR1Q86SU0 546 aaPredicted RBP33.47■■■□□ 2.95
KCNQ2-201ENST00000344425 EFCAB5A4FU69 1503 aa33.39■■■□□ 2.94
KCNQ2-201ENST00000344425 ARID4BQ4LE39 1312 aaPredicted RBP33.31■■■□□ 2.92
KCNQ2-201ENST00000344425 FRMPD1Q5SYB0 1578 aa33.3■■■□□ 2.92
KCNQ2-201ENST00000344425 DENND4BO75064 1496 aaPredicted RBP33.29■■■□□ 2.92
KCNQ2-201ENST00000344425 ADAMTSL3P82987 1691 aa33.28■■■□□ 2.92
KCNQ2-201ENST00000344425 PTPRMP28827 1452 aa33.28■■■□□ 2.92
KCNQ2-201ENST00000344425 AKNAQ7Z591 1439 aa33.28■■■□□ 2.92
KCNQ2-201ENST00000344425 FANCAO15360 1455 aa33.26■■■□□ 2.91
KCNQ2-201ENST00000344425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.25■■■□□ 2.91
KCNQ2-201ENST00000344425 CFAP74Q9C0B2 1584 aa33.23■■■□□ 2.91
KCNQ2-201ENST00000344425 UBTFP17480 764 aaKnown RBP33.23■■■□□ 2.91
KCNQ2-201ENST00000344425 BCORL1Q5H9F3 1711 aa33.2■■■□□ 2.91
KCNQ2-201ENST00000344425 ARHGEF40Q8TER5 1519 aa33.17■■■□□ 2.9
KCNQ2-201ENST00000344425 RICTORQ6R327 1708 aa33.17■■■□□ 2.9
KCNQ2-201ENST00000344425 CDK13Q14004 1512 aaKnown RBP33.16■■■□□ 2.9
KCNQ2-201ENST00000344425 TTC37Q6PGP7 1564 aa33.16■■■□□ 2.9
KCNQ2-201ENST00000344425 EHMT2Q96KQ7 1210 aa33.16■■■□□ 2.9
KCNQ2-201ENST00000344425 ATP1B4Q9UN42 357 aaPredicted RBP33.15■■■□□ 2.9
KCNQ2-201ENST00000344425 FMN1Q68DA7 1419 aa33.14■■■□□ 2.9
KCNQ2-201ENST00000344425 MADDQ8WXG6 1647 aa33.12■■■□□ 2.89
KCNQ2-201ENST00000344425 CDK11AQ9UQ88 783 aaPredicted RBP33.11■■■□□ 2.89
KCNQ2-201ENST00000344425 PLCH2O75038 1416 aa33.09■■■□□ 2.89
KCNQ2-201ENST00000344425 POGZQ7Z3K3 1410 aa33.09■■■□□ 2.89
KCNQ2-201ENST00000344425 ZMYM4Q5VZL5 1548 aa33.09■■■□□ 2.89
KCNQ2-201ENST00000344425 MAGI2Q86UL8 1455 aa33.07■■■□□ 2.88
KCNQ2-201ENST00000344425 CHIC1Q5VXU3 224 aa33.05■■■□□ 2.88
KCNQ2-201ENST00000344425 HECW1Q76N89 1606 aa33.05■■■□□ 2.88
KCNQ2-201ENST00000344425 ZFYVE16Q7Z3T8 1539 aa33.05■■■□□ 2.88
KCNQ2-201ENST00000344425 ARHGAP35Q9NRY4 1499 aa33.05■■■□□ 2.88
KCNQ2-201ENST00000344425 SCAPERQ9BY12 1400 aa33.05■■■□□ 2.88
KCNQ2-201ENST00000344425 YEATS2Q9ULM3 1422 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms