RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 JPH4Q96JJ6 628 aa12.83□□□□□ -0.36
HMGCR-202ENST00000343975 PRXQ9BXM0 1461 aa12.82□□□□□ -0.36
HMGCR-202ENST00000343975 P3H3Q8IVL6 736 aa12.82□□□□□ -0.36
HMGCR-202ENST00000343975 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
HMGCR-202ENST00000343975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
HMGCR-202ENST00000343975 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
HMGCR-202ENST00000343975 TNIKQ9UKE5 1360 aa12.8□□□□□ -0.36
HMGCR-202ENST00000343975 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
HMGCR-202ENST00000343975 KIF21BO75037 1637 aa12.78□□□□□ -0.36
HMGCR-202ENST00000343975 KIAA0586Q9BVV6 1533 aa12.77□□□□□ -0.37
HMGCR-202ENST00000343975 CLIP1P30622 1438 aa12.76□□□□□ -0.37
HMGCR-202ENST00000343975 NUP160Q12769 1436 aa12.71□□□□□ -0.38
HMGCR-202ENST00000343975 CEP162Q5TB80 1403 aa12.7□□□□□ -0.38
HMGCR-202ENST00000343975 PRG4Q92954 1404 aaPredicted RBP12.7□□□□□ -0.38
HMGCR-202ENST00000343975 IQGAP2Q13576 1575 aa12.69□□□□□ -0.38
HMGCR-202ENST00000343975 CDK11AQ9UQ88 783 aaPredicted RBP12.69□□□□□ -0.38
HMGCR-202ENST00000343975 PTPRGP23470 1445 aa12.67□□□□□ -0.38
HMGCR-202ENST00000343975 CHD1O14646 1710 aa12.67□□□□□ -0.38
HMGCR-202ENST00000343975 CYB5RLQ6IPT4 315 aa12.66□□□□□ -0.38
HMGCR-202ENST00000343975 FMN1Q68DA7 1419 aa12.64□□□□□ -0.39
HMGCR-202ENST00000343975 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
HMGCR-202ENST00000343975 EFCAB5A4FU69 1503 aa12.61□□□□□ -0.39
HMGCR-202ENST00000343975 CEP170Q5SW79 1584 aa12.61□□□□□ -0.39
HMGCR-202ENST00000343975 FHOD3Q2V2M9 1422 aa12.61□□□□□ -0.39
HMGCR-202ENST00000343975 CTTNBP2Q8WZ74 1663 aa12.59□□□□□ -0.39
HMGCR-202ENST00000343975 PLEKHD1A6NEE1 506 aa12.57□□□□□ -0.4
HMGCR-202ENST00000343975 UGGT2Q9NYU1 1516 aa12.57□□□□□ -0.4
HMGCR-202ENST00000343975 DNAJC5Q9H3Z4 198 aa12.57□□□□□ -0.4
HMGCR-202ENST00000343975 CLASP1Q7Z460 1538 aa12.53□□□□□ -0.4
HMGCR-202ENST00000343975 ARHGAP35Q9NRY4 1499 aa12.52□□□□□ -0.4
HMGCR-202ENST00000343975 MTUS2Q5JR59 1369 aa12.52□□□□□ -0.41
HMGCR-202ENST00000343975 VPS8Q8N3P4 1428 aa12.52□□□□□ -0.41
HMGCR-202ENST00000343975 UACAQ9BZF9 1416 aa12.51□□□□□ -0.41
HMGCR-202ENST00000343975 ARHGEF11O15085 1522 aa12.5□□□□□ -0.41
HMGCR-202ENST00000343975 KCNH8Q96L42 1107 aa12.5□□□□□ -0.41
HMGCR-202ENST00000343975 KIAA0556O60303 1618 aa12.49□□□□□ -0.41
HMGCR-202ENST00000343975 TRHP20396 242 aaPredicted RBP12.48□□□□□ -0.41
HMGCR-202ENST00000343975 DISP1Q96F81 1524 aa12.47□□□□□ -0.41
HMGCR-202ENST00000343975 ARAP1Q96P48 1450 aa12.45□□□□□ -0.42
HMGCR-202ENST00000343975 CASKIN1Q8WXD9 1431 aa12.44□□□□□ -0.42
HMGCR-202ENST00000343975 PPARGC1BQ86YN6 1023 aaKnown RBP12.44□□□□□ -0.42
HMGCR-202ENST00000343975 CCDC18Q5T9S5 1454 aa12.43□□□□□ -0.42
HMGCR-202ENST00000343975 MYT1LQ9UL68 1186 aa12.43□□□□□ -0.42
HMGCR-202ENST00000343975 PLB1Q6P1J6 1458 aa12.42□□□□□ -0.42
HMGCR-202ENST00000343975 FYCO1Q9BQS8 1478 aa12.42□□□□□ -0.42
HMGCR-202ENST00000343975 SAMD9Q5K651 1589 aa12.42□□□□□ -0.42
HMGCR-202ENST00000343975 SHROOM2Q13796 1616 aa12.41□□□□□ -0.42
HMGCR-202ENST00000343975 HECW1Q76N89 1606 aa12.41□□□□□ -0.42
HMGCR-202ENST00000343975 RIMBP3CA6NJZ7 1639 aa12.38□□□□□ -0.43
HMGCR-202ENST00000343975 RIMBP3BA6NNM3 1639 aa12.38□□□□□ -0.43
HMGCR-202ENST00000343975 RIMBP3Q9UFD9 1639 aa12.38□□□□□ -0.43
HMGCR-202ENST00000343975 ZNF777Q9ULD5 760 aaPredicted RBP12.38□□□□□ -0.43
HMGCR-202ENST00000343975 ERCC6L2Q5T890 1561 aa12.38□□□□□ -0.43
HMGCR-202ENST00000343975 ABCC2Q92887 1545 aa12.38□□□□□ -0.43
HMGCR-202ENST00000343975 RAPGEF6Q8TEU7 1601 aa12.37□□□□□ -0.43
HMGCR-202ENST00000343975 FAM69CQ0P6D2 419 aa12.36□□□□□ -0.43
HMGCR-202ENST00000343975 CCNB3Q8WWL7 1395 aa12.36□□□□□ -0.43
HMGCR-202ENST00000343975 FAM50AQ14320 339 aaKnown RBP12.35□□□□□ -0.43
HMGCR-202ENST00000343975 EPRSP07814 1512 aaKnown RBP12.35□□□□□ -0.43
HMGCR-202ENST00000343975 UHRF1BP1LA0JNW5 1464 aa12.34□□□□□ -0.43
HMGCR-202ENST00000343975 CFDP1Q9UEE9 299 aaPredicted RBP12.34□□□□□ -0.43
HMGCR-202ENST00000343975 PCF11O94913 1555 aaKnown RBP12.33□□□□□ -0.44
HMGCR-202ENST00000343975 EFCAB2Q5VUJ9 269 aa12.32□□□□□ -0.44
HMGCR-202ENST00000343975 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
HMGCR-202ENST00000343975 NUP153P49790 1475 aaKnown RBP12.31□□□□□ -0.44
HMGCR-202ENST00000343975 ATP10BO94823 1461 aa12.31□□□□□ -0.44
HMGCR-202ENST00000343975 ABCA8O94911 1581 aa12.3□□□□□ -0.44
HMGCR-202ENST00000343975 CDK13Q14004 1512 aaKnown RBP12.3□□□□□ -0.44
HMGCR-202ENST00000343975 ASXL2Q76L83 1435 aa12.3□□□□□ -0.44
HMGCR-202ENST00000343975 ITGAEP38570 1179 aa12.29□□□□□ -0.44
HMGCR-202ENST00000343975 KANK4Q5T7N3 995 aaPredicted RBP12.27□□□□□ -0.44
HMGCR-202ENST00000343975 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.44
HMGCR-202ENST00000343975 WDR7Q9Y4E6 1490 aa12.27□□□□□ -0.44
HMGCR-202ENST00000343975 TSPY4P0CV99 314 aa12.27□□□□□ -0.45
HMGCR-202ENST00000343975 TSPY10P0CW01 314 aa12.27□□□□□ -0.45
HMGCR-202ENST00000343975 EHBP1L1Q8N3D4 1523 aa12.26□□□□□ -0.45
HMGCR-202ENST00000343975 TIAM1Q13009 1591 aa12.25□□□□□ -0.45
HMGCR-202ENST00000343975 LRRC9Q6ZRR7 1453 aa12.25□□□□□ -0.45
HMGCR-202ENST00000343975 MAP3K1Q13233 1512 aa12.25□□□□□ -0.45
HMGCR-202ENST00000343975 CD109Q6YHK3 1445 aa12.22□□□□□ -0.45
HMGCR-202ENST00000343975 KIF14Q15058 1648 aa12.22□□□□□ -0.45
HMGCR-202ENST00000343975 TRIM26Q12899 539 aaPredicted RBP12.22□□□□□ -0.45
HMGCR-202ENST00000343975 ADCY10Q96PN6 1610 aa12.21□□□□□ -0.45
HMGCR-202ENST00000343975 RSPH4AQ5TD94 716 aa12.2□□□□□ -0.46
HMGCR-202ENST00000343975 NCOA2Q15596 1464 aa12.2□□□□□ -0.46
HMGCR-202ENST00000343975 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
HMGCR-202ENST00000343975 ARHGAP5Q13017 1502 aa12.18□□□□□ -0.46
HMGCR-202ENST00000343975 TEX14Q8IWB6 1497 aa12.18□□□□□ -0.46
HMGCR-202ENST00000343975 SUPT6HQ7KZ85 1726 aaKnown RBP12.18□□□□□ -0.46
HMGCR-202ENST00000343975 MYOM3Q5VTT5 1437 aa12.17□□□□□ -0.46
HMGCR-202ENST00000343975 MAPKBP1O60336 1514 aa12.16□□□□□ -0.46
HMGCR-202ENST00000343975 PLEKHH2Q8IVE3 1493 aa12.15□□□□□ -0.46
HMGCR-202ENST00000343975 PHLDB1Q86UU1 1377 aa12.14□□□□□ -0.47
HMGCR-202ENST00000343975 ABCC10Q5T3U5 1492 aa12.14□□□□□ -0.47
HMGCR-202ENST00000343975 CFAP43Q8NDM7 1665 aa12.14□□□□□ -0.47
HMGCR-202ENST00000343975 ESF1Q9H501 851 aaKnown RBP12.14□□□□□ -0.47
HMGCR-202ENST00000343975 PCGF6Q9BYE7 350 aa12.13□□□□□ -0.47
HMGCR-202ENST00000343975 MIA2Q96PC5 1412 aa12.13□□□□□ -0.47
HMGCR-202ENST00000343975 HNRNPMP52272 730 aaKnown RBP eCLIP12.13□□□□□ -0.471e-7■■■■■ 40.9
HMGCR-202ENST00000343975 CHIC2Q9UKJ5 165 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms