RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 SUPT16HQ9Y5B9 1047 aaKnown RBP14.19□□□□□ -0.14
CCDC18-201ENST00000343253 EIF4G2P78344 907 aaKnown RBP eCLIP14.19□□□□□ -0.14
CCDC18-201ENST00000343253 P3H3Q8IVL6 736 aa14.17□□□□□ -0.14
CCDC18-201ENST00000343253 ABCC9O60706 1549 aa14.17□□□□□ -0.14
CCDC18-201ENST00000343253 ZNF777Q9ULD5 760 aaPredicted RBP14.16□□□□□ -0.14
CCDC18-201ENST00000343253 NRDCO43847 1150 aa14.14□□□□□ -0.15
CCDC18-201ENST00000343253 CHAF1AQ13111 956 aaPredicted RBP14.14□□□□□ -0.15
CCDC18-201ENST00000343253 PABPN1Q86U42 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCDC18-201ENST00000343253 MSNP26038 577 aaKnown RBP14.12□□□□□ -0.15
CCDC18-201ENST00000343253 CASC1Q6TDU7 716 aa14.1□□□□□ -0.15
CCDC18-201ENST00000343253 GOLGA6L6A8MZA4 724 aa14.1□□□□□ -0.15
CCDC18-201ENST00000343253 RBM19Q9Y4C8 960 aaKnown RBP14.08□□□□□ -0.15
CCDC18-201ENST00000343253 PNNQ9H307 717 aaKnown RBP14.07□□□□□ -0.16
CCDC18-201ENST00000343253 PLCB2Q00722 1185 aa14.06□□□□□ -0.16
CCDC18-201ENST00000343253 CHGAP10645 457 aaKnown RBP14.04□□□□□ -0.16
CCDC18-201ENST00000343253 HIRIP3Q9BW71 556 aaPredicted RBP14.04□□□□□ -0.16
CCDC18-201ENST00000343253 ARID3CA6NKF2 412 aa14.04□□□□□ -0.16
CCDC18-201ENST00000343253 HSP90AB1P08238 724 aaKnown RBP14.02□□□□□ -0.17
CCDC18-201ENST00000343253 RGS3P49796 1198 aa14.02□□□□□ -0.17
CCDC18-201ENST00000343253 FBLN2P98095 1184 aa14.02□□□□□ -0.17
CCDC18-201ENST00000343253 CHMP4BQ9H444 224 aaKnown RBP14.01□□□□□ -0.17
CCDC18-201ENST00000343253 B4GALNT3Q6L9W6 998 aa13.99□□□□□ -0.17
CCDC18-201ENST00000343253 FTSJ3Q8IY81 847 aaKnown RBP13.99□□□□□ -0.17
CCDC18-201ENST00000343253 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
CCDC18-201ENST00000343253 KDM2AQ9Y2K7 1162 aa13.98□□□□□ -0.17
CCDC18-201ENST00000343253 MS4A1P11836 297 aa13.98□□□□□ -0.17
CCDC18-201ENST00000343253 HSCBQ8IWL3 235 aa13.98□□□□□ -0.17
CCDC18-201ENST00000343253 CHIC2Q9UKJ5 165 aa13.98□□□□□ -0.17
CCDC18-201ENST00000343253 PTMSP20962 102 aa13.97□□□□□ -0.17
CCDC18-201ENST00000343253 CFAP53Q96M91 514 aa13.97□□□□□ -0.17
CCDC18-201ENST00000343253 SCRIBQ14160 1630 aa13.96□□□□□ -0.17
CCDC18-201ENST00000343253 TNNT3P45378 269 aaPredicted RBP13.96□□□□□ -0.17
CCDC18-201ENST00000343253 TSPY4P0CV99 314 aa13.95□□□□□ -0.18
CCDC18-201ENST00000343253 TSPY10P0CW01 314 aa13.95□□□□□ -0.18
CCDC18-201ENST00000343253 ESF1Q9H501 851 aaKnown RBP13.95□□□□□ -0.18
CCDC18-201ENST00000343253 CDCA8Q53HL2 280 aa13.95□□□□□ -0.18
CCDC18-201ENST00000343253 KIAA2012Q0VF49 1180 aa13.94□□□□□ -0.18
CCDC18-201ENST00000343253 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
CCDC18-201ENST00000343253 GOLGA6L4A6NEF3 574 aa13.93□□□□□ -0.18
CCDC18-201ENST00000343253 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
CCDC18-201ENST00000343253 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.92□□□□□ -0.18
CCDC18-201ENST00000343253 CCDC180Q9P1Z9 1646 aa13.92□□□□□ -0.18
CCDC18-201ENST00000343253 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
CCDC18-201ENST00000343253 ARID4BQ4LE39 1312 aaPredicted RBP13.91□□□□□ -0.18
CCDC18-201ENST00000343253 GBP4Q96PP9 640 aa13.91□□□□□ -0.18
CCDC18-201ENST00000343253 KNSTRNQ9Y448 316 aa13.91□□□□□ -0.18
CCDC18-201ENST00000343253 MTUS2Q5JR59 1369 aa13.9□□□□□ -0.18
CCDC18-201ENST00000343253 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
CCDC18-201ENST00000343253 RSPH6AQ9H0K4 717 aa13.9□□□□□ -0.18
CCDC18-201ENST00000343253 HSP90AA2PQ14568 343 aaPredicted RBP13.89□□□□□ -0.19
CCDC18-201ENST00000343253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC18-201ENST00000343253 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
CCDC18-201ENST00000343253 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
CCDC18-201ENST00000343253 USP35Q9P2H5 1018 aa13.86□□□□□ -0.19
CCDC18-201ENST00000343253 CLIP1P30622 1438 aa13.86□□□□□ -0.19
CCDC18-201ENST00000343253 DRC7Q8IY82 874 aa13.86□□□□□ -0.19
CCDC18-201ENST00000343253 RSF1Q96T23 1441 aaPredicted RBP13.85□□□□□ -0.19
CCDC18-201ENST00000343253 GOLGA6L3A6NEY3 463 aa13.85□□□□□ -0.19
CCDC18-201ENST00000343253 FRAT1Q92837 279 aaPredicted RBP13.85□□□□□ -0.19
CCDC18-201ENST00000343253 IPO9Q96P70 1041 aaKnown RBP13.84□□□□□ -0.19
CCDC18-201ENST00000343253 FGD1P98174 961 aa13.84□□□□□ -0.19
CCDC18-201ENST00000343253 TIMELESSQ9UNS1 1208 aa13.82□□□□□ -0.2
CCDC18-201ENST00000343253 NUDCQ9Y266 331 aa13.82□□□□□ -0.2
CCDC18-201ENST00000343253 MCCP23508 829 aa13.82□□□□□ -0.2
CCDC18-201ENST00000343253 MAPK8IP3Q9UPT6 1336 aa13.82□□□□□ -0.2
CCDC18-201ENST00000343253 SYAP1Q96A49 352 aaPredicted RBP13.81□□□□□ -0.2
CCDC18-201ENST00000343253 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
CCDC18-201ENST00000343253 KCNJ4P48050 445 aa13.8□□□□□ -0.2
CCDC18-201ENST00000343253 SENP3-EIF4A1A0A087X0R7 540 aa13.79□□□□□ -0.2
CCDC18-201ENST00000343253 CARD11Q9BXL7 1154 aa13.79□□□□□ -0.2
CCDC18-201ENST00000343253 RRP7BPQ9NSQ0 103 aa13.78□□□□□ -0.2
CCDC18-201ENST00000343253 CEP162Q5TB80 1403 aa13.78□□□□□ -0.2
CCDC18-201ENST00000343253 NEUROD2Q15784 382 aa13.78□□□□□ -0.2
CCDC18-201ENST00000343253 GZF1Q9H116 711 aaPredicted RBP13.77□□□□□ -0.2
CCDC18-201ENST00000343253 ARID3AQ99856 593 aa13.76□□□□□ -0.21
CCDC18-201ENST00000343253 EEA1Q15075 1411 aa13.76□□□□□ -0.21
CCDC18-201ENST00000343253 SLKQ9H2G2 1235 aaPredicted RBP13.75□□□□□ -0.21
CCDC18-201ENST00000343253 SPRYD3Q8NCJ5 442 aa13.74□□□□□ -0.21
CCDC18-201ENST00000343253 GOLGA6L1Q8N7Z2 621 aa13.74□□□□□ -0.21
CCDC18-201ENST00000343253 HTATSF1O43719 755 aaKnown RBP13.73□□□□□ -0.21
CCDC18-201ENST00000343253 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
CCDC18-201ENST00000343253 CALD1Q05682 793 aaKnown RBP13.72□□□□□ -0.21
CCDC18-201ENST00000343253 OS9Q13438 667 aaPredicted RBP13.7□□□□□ -0.22
CCDC18-201ENST00000343253 RGL3Q3MIN7 710 aa13.7□□□□□ -0.22
CCDC18-201ENST00000343253 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC18-201ENST00000343253 NAP1L2Q9ULW6 460 aaPredicted RBP13.69□□□□□ -0.22
CCDC18-201ENST00000343253 RCAN3Q9UKA8 241 aa13.68□□□□□ -0.22
CCDC18-201ENST00000343253 RWDD1Q9H446 243 aaPredicted RBP13.68□□□□□ -0.22
CCDC18-201ENST00000343253 GSE1Q14687 1217 aa13.68□□□□□ -0.22
CCDC18-201ENST00000343253 SIN3AQ96ST3 1273 aa13.67□□□□□ -0.22
CCDC18-201ENST00000343253 GOLGA3Q08378 1498 aa13.67□□□□□ -0.22
CCDC18-201ENST00000343253 TPM4P67936 248 aa13.67□□□□□ -0.22
CCDC18-201ENST00000343253 IPO8O15397 1037 aaKnown RBP13.66□□□□□ -0.22
CCDC18-201ENST00000343253 ZBTB7CA1YPR0 619 aa13.65□□□□□ -0.22
CCDC18-201ENST00000343253 DDX11L8A8MPP1 907 aa13.65□□□□□ -0.22
CCDC18-201ENST00000343253 PHF14O94880 888 aa13.65□□□□□ -0.22
CCDC18-201ENST00000343253 CSPP1Q1MSJ5 1256 aa13.64□□□□□ -0.23
CCDC18-201ENST00000343253 KIAA1211Q6ZU35 1233 aa13.64□□□□□ -0.23
CCDC18-201ENST00000343253 NOC3LQ8WTT2 800 aaKnown RBP13.64□□□□□ -0.23
CCDC18-201ENST00000343253 SETQ01105 290 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms