RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CCDC136Q96JN2 1154 aa10.88□□□□□ -0.67
UBE4B-202ENST00000343090 EEA1Q15075 1411 aa10.88□□□□□ -0.67
UBE4B-202ENST00000343090 RB1CC1Q8TDY2 1594 aa10.88□□□□□ -0.67
UBE4B-202ENST00000343090 NEFMP07197 916 aa10.86□□□□□ -0.67
UBE4B-202ENST00000343090 SIN3AQ96ST3 1273 aa10.86□□□□□ -0.67
UBE4B-202ENST00000343090 SOGA1O94964 1423 aa10.85□□□□□ -0.67
UBE4B-202ENST00000343090 EIF4G2P78344 907 aaKnown RBP eCLIP10.84□□□□□ -0.674e-6■□□□□ 10.7
UBE4B-202ENST00000343090 CEP164Q9UPV0 1460 aa10.83□□□□□ -0.68
UBE4B-202ENST00000343090 BAZ1BQ9UIG0 1483 aaKnown RBP10.82□□□□□ -0.68
UBE4B-202ENST00000343090 TSPY4P0CV99 314 aa10.82□□□□□ -0.68
UBE4B-202ENST00000343090 TSPY10P0CW01 314 aa10.82□□□□□ -0.68
UBE4B-202ENST00000343090 SENP3Q9H4L4 574 aaPredicted RBP10.8□□□□□ -0.68
UBE4B-202ENST00000343090 NACADO15069 1562 aa10.8□□□□□ -0.68
UBE4B-202ENST00000343090 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
UBE4B-202ENST00000343090 CHMP7Q8WUX9 453 aaPredicted RBP10.79□□□□□ -0.68
UBE4B-202ENST00000343090 KIF27Q86VH2 1401 aa10.78□□□□□ -0.68
UBE4B-202ENST00000343090 WDR43Q15061 677 aaKnown RBP eCLIP10.78□□□□□ -0.68
UBE4B-202ENST00000343090 PLPPR3Q6T4P5 718 aa10.78□□□□□ -0.68
UBE4B-202ENST00000343090 NOP58Q9Y2X3 529 aaKnown RBP10.77□□□□□ -0.69
UBE4B-202ENST00000343090 STAG3Q9UJ98 1225 aa10.77□□□□□ -0.69
UBE4B-202ENST00000343090 RGL3Q3MIN7 710 aa10.77□□□□□ -0.69
UBE4B-202ENST00000343090 ABCC8Q09428 1581 aa10.76□□□□□ -0.69
UBE4B-202ENST00000343090 BAZ1AQ9NRL2 1556 aaPredicted RBP10.75□□□□□ -0.69
UBE4B-202ENST00000343090 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.75□□□□□ -0.69
UBE4B-202ENST00000343090 MROH2BQ7Z745 1585 aa10.74□□□□□ -0.69
UBE4B-202ENST00000343090 ARXQ96QS3 562 aa10.74□□□□□ -0.69
UBE4B-202ENST00000343090 KCNH8Q96L42 1107 aa10.74□□□□□ -0.69
UBE4B-202ENST00000343090 HSP90AA1P07900 732 aaKnown RBP10.73□□□□□ -0.69
UBE4B-202ENST00000343090 CCDC88BA6NC98 1476 aa10.72□□□□□ -0.69
UBE4B-202ENST00000343090 UPF2Q9HAU5 1272 aaKnown RBP10.72□□□□□ -0.69
UBE4B-202ENST00000343090 KANK4Q5T7N3 995 aaPredicted RBP10.72□□□□□ -0.69
UBE4B-202ENST00000343090 CCNB3Q8WWL7 1395 aa10.71□□□□□ -0.69
UBE4B-202ENST00000343090 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.71□□□□□ -0.7
UBE4B-202ENST00000343090 ESF1Q9H501 851 aaKnown RBP10.71□□□□□ -0.7
UBE4B-202ENST00000343090 NPM1P06748 294 aaKnown RBP eCLIP10.7□□□□□ -0.7
UBE4B-202ENST00000343090 CFDP1Q9UEE9 299 aaPredicted RBP10.7□□□□□ -0.7
UBE4B-202ENST00000343090 PLEKHD1A6NEE1 506 aa10.69□□□□□ -0.7
UBE4B-202ENST00000343090 CARD11Q9BXL7 1154 aa10.68□□□□□ -0.7
UBE4B-202ENST00000343090 LAS1LQ9Y4W2 734 aaKnown RBP10.67□□□□□ -0.7
UBE4B-202ENST00000343090 PPP4R2Q9NY27 417 aa10.66□□□□□ -0.7
UBE4B-202ENST00000343090 VPS8Q8N3P4 1428 aa10.65□□□□□ -0.7
UBE4B-202ENST00000343090 CUX2O14529 1486 aa10.65□□□□□ -0.7
UBE4B-202ENST00000343090 CARMIL1Q5VZK9 1371 aa10.64□□□□□ -0.71
UBE4B-202ENST00000343090 B4GALNT3Q6L9W6 998 aa10.64□□□□□ -0.71
UBE4B-202ENST00000343090 ERICH6BQ5W0A0 696 aa10.63□□□□□ -0.71
UBE4B-202ENST00000343090 FOXD1Q16676 465 aa10.62□□□□□ -0.71
UBE4B-202ENST00000343090 WIZO95785 1651 aa10.62□□□□□ -0.71
UBE4B-202ENST00000343090 ANP32BQ92688 251 aaKnown RBP10.61□□□□□ -0.71
UBE4B-202ENST00000343090 CC2D1BQ5T0F9 858 aaKnown RBP10.61□□□□□ -0.71
UBE4B-202ENST00000343090 PPM1GO15355 546 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-202ENST00000343090 ANO8Q9HCE9 1232 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-202ENST00000343090 NEUROD2Q15784 382 aa10.6□□□□□ -0.71
UBE4B-202ENST00000343090 SETD5Q9C0A6 1442 aa10.6□□□□□ -0.71
UBE4B-202ENST00000343090 KNSTRNQ9Y448 316 aa10.6□□□□□ -0.71
UBE4B-202ENST00000343090 EIF4G1Q04637 1599 aaKnown RBP10.6□□□□□ -0.71
UBE4B-202ENST00000343090 FHAD1B1AJZ9 1412 aa10.59□□□□□ -0.71
UBE4B-202ENST00000343090 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
UBE4B-202ENST00000343090 HSPA5P11021 654 aaKnown RBP10.59□□□□□ -0.71
UBE4B-202ENST00000343090 RAB3GAP2Q9H2M9 1393 aa10.58□□□□□ -0.72
UBE4B-202ENST00000343090 TNNT2P45379 298 aaPredicted RBP10.57□□□□□ -0.72
UBE4B-202ENST00000343090 DCAF11Q8TEB1 546 aa10.57□□□□□ -0.72
UBE4B-202ENST00000343090 DDRGK1Q96HY6 314 aa10.57□□□□□ -0.72
UBE4B-202ENST00000343090 RGS3P49796 1198 aa10.55□□□□□ -0.72
UBE4B-202ENST00000343090 NAP1L5Q96NT1 182 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-202ENST00000343090 FANCIQ9NVI1 1328 aa10.55□□□□□ -0.72
UBE4B-202ENST00000343090 ARHGAP35Q9NRY4 1499 aa10.54□□□□□ -0.72
UBE4B-202ENST00000343090 RUSC2Q8N2Y8 1516 aa10.54□□□□□ -0.72
UBE4B-202ENST00000343090 CCER2I3L3R5 266 aa10.53□□□□□ -0.72
UBE4B-202ENST00000343090 ZBTB7CA1YPR0 619 aa10.53□□□□□ -0.72
UBE4B-202ENST00000343090 MYH16Q9H6N6 1097 aa10.53□□□□□ -0.72
UBE4B-202ENST00000343090 FRAT1Q92837 279 aaPredicted RBP10.52□□□□□ -0.73
UBE4B-202ENST00000343090 PPP1R15AO75807 674 aaPredicted RBP10.52□□□□□ -0.73
UBE4B-202ENST00000343090 TIMELESSQ9UNS1 1208 aa10.51□□□□□ -0.73
UBE4B-202ENST00000343090 CDCA8Q53HL2 280 aa10.51□□□□□ -0.73
UBE4B-202ENST00000343090 RAPGEF2Q9Y4G8 1499 aa10.51□□□□□ -0.73
UBE4B-202ENST00000343090 BECN1Q14457 450 aa10.51□□□□□ -0.73
UBE4B-202ENST00000343090 CFAP53Q96M91 514 aa10.5□□□□□ -0.73
UBE4B-202ENST00000343090 TOP2AP11388 1531 aaKnown RBP10.5□□□□□ -0.73
UBE4B-202ENST00000343090 PKD2Q13563 968 aa10.49□□□□□ -0.73
UBE4B-202ENST00000343090 C14orf37Q86TY3 774 aa10.49□□□□□ -0.73
UBE4B-202ENST00000343090 FTSJ3Q8IY81 847 aaKnown RBP10.49□□□□□ -0.73
UBE4B-202ENST00000343090 TDRD9Q8NDG6 1382 aaKnown RBP10.49□□□□□ -0.73
UBE4B-202ENST00000343090 IPO9Q96P70 1041 aaKnown RBP10.48□□□□□ -0.73
UBE4B-202ENST00000343090 MPHOSPH9Q99550 1183 aa10.48□□□□□ -0.73
UBE4B-202ENST00000343090 ERCC6Q03468 1493 aa10.47□□□□□ -0.73
UBE4B-202ENST00000343090 TMF1P82094 1093 aa10.46□□□□□ -0.74
UBE4B-202ENST00000343090 FHOD3Q2V2M9 1422 aa10.46□□□□□ -0.74
UBE4B-202ENST00000343090 U2SURPO15042 1029 aaKnown RBP10.45□□□□□ -0.74
UBE4B-202ENST00000343090 DHX57Q6P158 1386 aaKnown RBP10.44□□□□□ -0.74
UBE4B-202ENST00000343090 TPRNQ4KMQ1 711 aa10.44□□□□□ -0.74
UBE4B-202ENST00000343090 SMARCA2P51531 1590 aa10.44□□□□□ -0.74
UBE4B-202ENST00000343090 MAPK8IP3Q9UPT6 1336 aa10.44□□□□□ -0.74
UBE4B-202ENST00000343090 NCLP19338 710 aaKnown RBP10.44□□□□□ -0.74
UBE4B-202ENST00000343090 L3MBTL2Q969R5 705 aa10.44□□□□□ -0.74
UBE4B-202ENST00000343090 POGKQ9P215 609 aa10.43□□□□□ -0.74
UBE4B-202ENST00000343090 SAFB2Q14151 953 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBE4B-202ENST00000343090 TRIM44Q96DX7 344 aaPredicted RBP10.43□□□□□ -0.74
UBE4B-202ENST00000343090 IL27Q8NEV9 243 aa10.4□□□□□ -0.74
UBE4B-202ENST00000343090 NUDCQ9Y266 331 aa10.4□□□□□ -0.74
UBE4B-202ENST00000343090 FMN1Q68DA7 1419 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms