RNA–Protein interactions for RNA: ENST00000341757.9

SCIN-202, Transcript of scinderin, humanhuman

TSL 1 (best)

Gene SCIN, Length 2,569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIN-202ENST00000341757 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
SCIN-202ENST00000341757 HNRNPUQ00839 825 aaKnown RBP eCLIP17.62■□□□□ 0.41
SCIN-202ENST00000341757 USP35Q9P2H5 1018 aa17.62■□□□□ 0.41
SCIN-202ENST00000341757 SOGA1O94964 1423 aa17.61■□□□□ 0.41
SCIN-202ENST00000341757 NEFMP07197 916 aa17.61■□□□□ 0.41
SCIN-202ENST00000341757 ZMYND15Q9H091 742 aa17.61■□□□□ 0.41
SCIN-202ENST00000341757 GOLGA3Q08378 1498 aa17.58■□□□□ 0.41
SCIN-202ENST00000341757 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.4
SCIN-202ENST00000341757 EEA1Q15075 1411 aa17.56■□□□□ 0.4
SCIN-202ENST00000341757 VSIG10Q8N0Z9 540 aa17.56■□□□□ 0.4
SCIN-202ENST00000341757 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
SCIN-202ENST00000341757 CLIP1P30622 1438 aa17.54■□□□□ 0.4
SCIN-202ENST00000341757 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
SCIN-202ENST00000341757 LAS1LQ9Y4W2 734 aaKnown RBP17.54■□□□□ 0.4
SCIN-202ENST00000341757 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
SCIN-202ENST00000341757 WDR97A6NE52 1622 aa17.49■□□□□ 0.39
SCIN-202ENST00000341757 RUSC2Q8N2Y8 1516 aa17.49■□□□□ 0.39
SCIN-202ENST00000341757 WIZO95785 1651 aa17.48■□□□□ 0.39
SCIN-202ENST00000341757 GSE1Q14687 1217 aa17.48■□□□□ 0.39
SCIN-202ENST00000341757 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
SCIN-202ENST00000341757 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
SCIN-202ENST00000341757 RANGAP1P46060 587 aaPredicted RBP17.44■□□□□ 0.38
SCIN-202ENST00000341757 FAM43AQ8N2R8 423 aa17.44■□□□□ 0.38
SCIN-202ENST00000341757 CUX2O14529 1486 aa17.42■□□□□ 0.38
SCIN-202ENST00000341757 MAPKBP1O60336 1514 aa17.41■□□□□ 0.38
SCIN-202ENST00000341757 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
SCIN-202ENST00000341757 SIN3AQ96ST3 1273 aa17.36■□□□□ 0.37
SCIN-202ENST00000341757 CEP164Q9UPV0 1460 aa17.36■□□□□ 0.37
SCIN-202ENST00000341757 FRAT1Q92837 279 aaPredicted RBP17.36■□□□□ 0.37
SCIN-202ENST00000341757 RRBP1Q9P2E9 1410 aaKnown RBP17.31■□□□□ 0.36
SCIN-202ENST00000341757 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
SCIN-202ENST00000341757 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
SCIN-202ENST00000341757 KIF21BO75037 1637 aa17.28■□□□□ 0.36
SCIN-202ENST00000341757 HSP90AA2PQ14568 343 aaPredicted RBP17.28■□□□□ 0.36
SCIN-202ENST00000341757 NFKBIBQ15653 356 aa17.27■□□□□ 0.35
SCIN-202ENST00000341757 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
SCIN-202ENST00000341757 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
SCIN-202ENST00000341757 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
SCIN-202ENST00000341757 DCAF11Q8TEB1 546 aa17.24■□□□□ 0.35
SCIN-202ENST00000341757 ZBED9Q6R2W3 1325 aa17.24■□□□□ 0.35
SCIN-202ENST00000341757 RRP9O43818 475 aaKnown RBP17.24■□□□□ 0.35
SCIN-202ENST00000341757 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
SCIN-202ENST00000341757 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
SCIN-202ENST00000341757 A0A0U1RQG5 324 aaPredicted RBP17.21■□□□□ 0.35
SCIN-202ENST00000341757 PEG3Q9GZU2 1588 aa17.2■□□□□ 0.34
SCIN-202ENST00000341757 PDE4AP27815 886 aa17.19■□□□□ 0.34
SCIN-202ENST00000341757 CCDC184Q52MB2 194 aa17.19■□□□□ 0.34
SCIN-202ENST00000341757 FAM9BQ8IZU0 186 aa17.18■□□□□ 0.34
SCIN-202ENST00000341757 RRAGDQ9NQL2 400 aaPredicted RBP17.18■□□□□ 0.34
SCIN-202ENST00000341757 AKNAQ7Z591 1439 aa17.18■□□□□ 0.34
SCIN-202ENST00000341757 HSP90AA1P07900 732 aaKnown RBP17.17■□□□□ 0.34
SCIN-202ENST00000341757 RBM10P98175 930 aaKnown RBP17.17■□□□□ 0.34
SCIN-202ENST00000341757 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
SCIN-202ENST00000341757 NAP1L5Q96NT1 182 aaPredicted RBP17.15■□□□□ 0.34
SCIN-202ENST00000341757 DDRGK1Q96HY6 314 aa17.15■□□□□ 0.34
SCIN-202ENST00000341757 BACH2Q9BYV9 841 aa17.15■□□□□ 0.34
SCIN-202ENST00000341757 SETD5Q9C0A6 1442 aa17.12■□□□□ 0.33
SCIN-202ENST00000341757 RNF123Q5XPI4 1314 aa17.12■□□□□ 0.33
SCIN-202ENST00000341757 AAMPQ13685 434 aa17.12■□□□□ 0.33
SCIN-202ENST00000341757 SMG6Q86US8 1419 aaKnown RBP17.1■□□□□ 0.33
SCIN-202ENST00000341757 FGD1P98174 961 aa17.1■□□□□ 0.33
SCIN-202ENST00000341757 RAPGEF2Q9Y4G8 1499 aa17.09■□□□□ 0.33
SCIN-202ENST00000341757 MRS2Q9HD23 443 aa17.08■□□□□ 0.32
SCIN-202ENST00000341757 MS4A1P11836 297 aa17.06■□□□□ 0.32
SCIN-202ENST00000341757 PNNQ9H307 717 aaKnown RBP17.05■□□□□ 0.32
SCIN-202ENST00000341757 NUDCQ9Y266 331 aa17.05■□□□□ 0.32
SCIN-202ENST00000341757 FRAT2O75474 233 aaPredicted RBP17.05■□□□□ 0.32
SCIN-202ENST00000341757 SLC4A3P48751 1232 aa17.05■□□□□ 0.32
SCIN-202ENST00000341757 PDE4CQ08493 712 aa17.03■□□□□ 0.32
SCIN-202ENST00000341757 ARAP1Q96P48 1450 aa17.02■□□□□ 0.32
SCIN-202ENST00000341757 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
SCIN-202ENST00000341757 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
SCIN-202ENST00000341757 PRKRIP1Q9H875 184 aaPredicted RBP17■□□□□ 0.31
SCIN-202ENST00000341757 CLCN1P35523 988 aa16.97■□□□□ 0.31
SCIN-202ENST00000341757 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
SCIN-202ENST00000341757 CNTLNQ9NXG0 1405 aa16.97■□□□□ 0.31
SCIN-202ENST00000341757 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
SCIN-202ENST00000341757 L1TD1Q5T7N2 865 aaKnown RBP16.94■□□□□ 0.3
SCIN-202ENST00000341757 PRDM4Q9UKN5 801 aa16.94■□□□□ 0.3
SCIN-202ENST00000341757 NCOA2Q15596 1464 aa16.93■□□□□ 0.3
SCIN-202ENST00000341757 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
SCIN-202ENST00000341757 EXOC6Q8TAG9 804 aa16.92■□□□□ 0.3
SCIN-202ENST00000341757 POGKQ9P215 609 aa16.91■□□□□ 0.3
SCIN-202ENST00000341757 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
SCIN-202ENST00000341757 CENPJQ9HC77 1338 aaPredicted RBP16.9■□□□□ 0.3
SCIN-202ENST00000341757 PDCL3Q9H2J4 239 aa16.89■□□□□ 0.29
SCIN-202ENST00000341757 RGS3P49796 1198 aa16.88■□□□□ 0.29
SCIN-202ENST00000341757 RRP1P56182 461 aaKnown RBP16.84■□□□□ 0.29
SCIN-202ENST00000341757 FAM50AQ14320 339 aaKnown RBP16.84■□□□□ 0.29
SCIN-202ENST00000341757 ARID4BQ4LE39 1312 aaPredicted RBP16.83■□□□□ 0.29
SCIN-202ENST00000341757 PDIA4P13667 645 aaKnown RBP16.83■□□□□ 0.28
SCIN-202ENST00000341757 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
SCIN-202ENST00000341757 SKAP1Q86WV1 359 aa16.82■□□□□ 0.28
SCIN-202ENST00000341757 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
SCIN-202ENST00000341757 XRCC6P12956 609 aaKnown RBP eCLIP16.8■□□□□ 0.28
SCIN-202ENST00000341757 EIF4G2P78344 907 aaKnown RBP eCLIP16.8■□□□□ 0.28
SCIN-202ENST00000341757 ARXQ96QS3 562 aa16.8■□□□□ 0.28
SCIN-202ENST00000341757 TPM2P07951 284 aa16.79■□□□□ 0.28
SCIN-202ENST00000341757 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
SCIN-202ENST00000341757 KDM5BQ9UGL1 1544 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms