RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 NPM1P06748 294 aaKnown RBP eCLIP23.29■■□□□ 1.32
SYDE2-202ENST00000341460 LAS1LQ9Y4W2 734 aaKnown RBP23.28■■□□□ 1.32
SYDE2-202ENST00000341460 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
SYDE2-202ENST00000341460 SALL2Q9Y467 1007 aaPredicted RBP23.2■■□□□ 1.3
SYDE2-202ENST00000341460 SUPT16HQ9Y5B9 1047 aaKnown RBP23.18■■□□□ 1.3
SYDE2-202ENST00000341460 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
SYDE2-202ENST00000341460 L1TD1Q5T7N2 865 aaKnown RBP23.14■■□□□ 1.29
SYDE2-202ENST00000341460 CHIC2Q9UKJ5 165 aa23.12■■□□□ 1.29
SYDE2-202ENST00000341460 MRS2Q9HD23 443 aa23.11■■□□□ 1.29
SYDE2-202ENST00000341460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.11■■□□□ 1.29
SYDE2-202ENST00000341460 TMC1Q8TDI8 760 aa23.1■■□□□ 1.29
SYDE2-202ENST00000341460 PLPPR3Q6T4P5 718 aa23.1■■□□□ 1.29
SYDE2-202ENST00000341460 TSPY4P0CV99 314 aa23.08■■□□□ 1.28
SYDE2-202ENST00000341460 TSPY10P0CW01 314 aa23.08■■□□□ 1.28
SYDE2-202ENST00000341460 RBM19Q9Y4C8 960 aaKnown RBP23.07■■□□□ 1.28
SYDE2-202ENST00000341460 ARID4BQ4LE39 1312 aaPredicted RBP23.05■■□□□ 1.28
SYDE2-202ENST00000341460 PPP4R2Q9NY27 417 aa23.04■■□□□ 1.28
SYDE2-202ENST00000341460 MSNP26038 577 aaKnown RBP23.03■■□□□ 1.28
SYDE2-202ENST00000341460 PNNQ9H307 717 aaKnown RBP23.03■■□□□ 1.28
SYDE2-202ENST00000341460 WDR43Q15061 677 aaKnown RBP eCLIP23.02■■□□□ 1.28
SYDE2-202ENST00000341460 CHAF1AQ13111 956 aaPredicted RBP23■■□□□ 1.27
SYDE2-202ENST00000341460 MTUS2Q5JR59 1369 aa22.99■■□□□ 1.27
SYDE2-202ENST00000341460 VSIG10Q8N0Z9 540 aa22.99■■□□□ 1.27
SYDE2-202ENST00000341460 TNNT3P45378 269 aaPredicted RBP22.98■■□□□ 1.27
SYDE2-202ENST00000341460 KDM2AQ9Y2K7 1162 aa22.96■■□□□ 1.27
SYDE2-202ENST00000341460 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.27
SYDE2-202ENST00000341460 CHMP7Q8WUX9 453 aaPredicted RBP22.94■■□□□ 1.26
SYDE2-202ENST00000341460 HSP90AA2PQ14568 343 aaPredicted RBP22.92■■□□□ 1.26
SYDE2-202ENST00000341460 RSPH6AQ9H0K4 717 aa22.91■■□□□ 1.26
SYDE2-202ENST00000341460 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
SYDE2-202ENST00000341460 ZRSR1Q15695 479 aaKnown RBP22.86■■□□□ 1.25
SYDE2-202ENST00000341460 MYH16Q9H6N6 1097 aa22.86■■□□□ 1.25
SYDE2-202ENST00000341460 PLCB2Q00722 1185 aa22.84■■□□□ 1.25
SYDE2-202ENST00000341460 CLIP1P30622 1438 aa22.83■■□□□ 1.25
SYDE2-202ENST00000341460 TSHZ2Q9NRE2 1034 aa22.81■■□□□ 1.24
SYDE2-202ENST00000341460 EIF4G2P78344 907 aaKnown RBP eCLIP22.81■■□□□ 1.24
SYDE2-202ENST00000341460 ARID3AQ99856 593 aa22.8■■□□□ 1.24
SYDE2-202ENST00000341460 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
SYDE2-202ENST00000341460 GOLGA6L6A8MZA4 724 aa22.8■■□□□ 1.24
SYDE2-202ENST00000341460 NRDCO43847 1150 aa22.77■■□□□ 1.24
SYDE2-202ENST00000341460 RRP7BPQ9NSQ0 103 aa22.75■■□□□ 1.23
SYDE2-202ENST00000341460 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
SYDE2-202ENST00000341460 TPRNQ4KMQ1 711 aa22.73■■□□□ 1.23
SYDE2-202ENST00000341460 B4GALNT3Q6L9W6 998 aa22.73■■□□□ 1.23
SYDE2-202ENST00000341460 PLEKHD1A6NEE1 506 aa22.72■■□□□ 1.23
SYDE2-202ENST00000341460 PPP1R15AO75807 674 aaPredicted RBP22.71■■□□□ 1.23
SYDE2-202ENST00000341460 HIRIP3Q9BW71 556 aaPredicted RBP22.7■■□□□ 1.22
SYDE2-202ENST00000341460 PRKCSHP14314 528 aaPredicted RBP22.69■■□□□ 1.22
SYDE2-202ENST00000341460 KCNH8Q96L42 1107 aa22.69■■□□□ 1.22
SYDE2-202ENST00000341460 HSP90AB1P08238 724 aaKnown RBP22.68■■□□□ 1.22
SYDE2-202ENST00000341460 RGS3P49796 1198 aa22.66■■□□□ 1.22
SYDE2-202ENST00000341460 EEA1Q15075 1411 aa22.66■■□□□ 1.22
SYDE2-202ENST00000341460 PKNOX2Q96KN3 472 aa22.65■■□□□ 1.22
SYDE2-202ENST00000341460 GOLGA3Q08378 1498 aa22.63■■□□□ 1.21
SYDE2-202ENST00000341460 CASC1Q6TDU7 716 aa22.63■■□□□ 1.21
SYDE2-202ENST00000341460 KIAA2012Q0VF49 1180 aa22.63■■□□□ 1.21
SYDE2-202ENST00000341460 C14orf37Q86TY3 774 aa22.62■■□□□ 1.21
SYDE2-202ENST00000341460 A0A0G2JS52 829 aa22.62■■□□□ 1.21
SYDE2-202ENST00000341460 ZBTB7CA1YPR0 619 aa22.62■■□□□ 1.21
SYDE2-202ENST00000341460 HSCBQ8IWL3 235 aa22.6■■□□□ 1.21
SYDE2-202ENST00000341460 CDCA8Q53HL2 280 aa22.59■■□□□ 1.21
SYDE2-202ENST00000341460 GOLGA6L3A6NEY3 463 aa22.59■■□□□ 1.21
SYDE2-202ENST00000341460 RGL3Q3MIN7 710 aa22.59■■□□□ 1.21
SYDE2-202ENST00000341460 CFAP53Q96M91 514 aa22.59■■□□□ 1.21
SYDE2-202ENST00000341460 PODXL2Q9NZ53 605 aa22.57■■□□□ 1.2
SYDE2-202ENST00000341460 SENP3Q9H4L4 574 aaPredicted RBP22.57■■□□□ 1.2
SYDE2-202ENST00000341460 PTMSP20962 102 aa22.56■■□□□ 1.2
SYDE2-202ENST00000341460 CEP162Q5TB80 1403 aa22.55■■□□□ 1.2
SYDE2-202ENST00000341460 IPO9Q96P70 1041 aaKnown RBP22.55■■□□□ 1.2
SYDE2-202ENST00000341460 CFDP1Q9UEE9 299 aaPredicted RBP22.54■■□□□ 1.2
SYDE2-202ENST00000341460 A0A0U1RQG5 324 aaPredicted RBP22.54■■□□□ 1.2
SYDE2-202ENST00000341460 USP35Q9P2H5 1018 aa22.53■■□□□ 1.2
SYDE2-202ENST00000341460 KNSTRNQ9Y448 316 aa22.53■■□□□ 1.2
SYDE2-202ENST00000341460 PLEKHG5O94827 1062 aa22.52■■□□□ 1.2
SYDE2-202ENST00000341460 NACADO15069 1562 aa22.52■■□□□ 1.2
SYDE2-202ENST00000341460 DRC7Q8IY82 874 aa22.51■■□□□ 1.19
SYDE2-202ENST00000341460 GZF1Q9H116 711 aaPredicted RBP22.5■■□□□ 1.19
SYDE2-202ENST00000341460 SENP3-EIF4A1A0A087X0R7 540 aa22.49■■□□□ 1.19
SYDE2-202ENST00000341460 BAZ1BQ9UIG0 1483 aaKnown RBP22.49■■□□□ 1.19
SYDE2-202ENST00000341460 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
SYDE2-202ENST00000341460 TIMELESSQ9UNS1 1208 aa22.48■■□□□ 1.19
SYDE2-202ENST00000341460 GBP4Q96PP9 640 aa22.48■■□□□ 1.19
SYDE2-202ENST00000341460 KIF27Q86VH2 1401 aa22.46■■□□□ 1.19
SYDE2-202ENST00000341460 CARD11Q9BXL7 1154 aa22.46■■□□□ 1.19
SYDE2-202ENST00000341460 CALRP27797 417 aaKnown RBP22.44■■□□□ 1.18
SYDE2-202ENST00000341460 HAP1P54257 671 aaPredicted RBP22.42■■□□□ 1.18
SYDE2-202ENST00000341460 SPRYD3Q8NCJ5 442 aa22.42■■□□□ 1.18
SYDE2-202ENST00000341460 GOLGA6L4A6NEF3 574 aa22.42■■□□□ 1.18
SYDE2-202ENST00000341460 FTSJ3Q8IY81 847 aaKnown RBP22.42■■□□□ 1.18
SYDE2-202ENST00000341460 TULP1O00294 542 aaPredicted RBP22.41■■□□□ 1.18
SYDE2-202ENST00000341460 TCERG1O14776 1098 aaKnown RBP22.39■■□□□ 1.17
SYDE2-202ENST00000341460 CEP164Q9UPV0 1460 aa22.38■■□□□ 1.17
SYDE2-202ENST00000341460 TNIKQ9UKE5 1360 aa22.38■■□□□ 1.17
SYDE2-202ENST00000341460 GSE1Q14687 1217 aa22.37■■□□□ 1.17
SYDE2-202ENST00000341460 MAPK8IP3Q9UPT6 1336 aa22.37■■□□□ 1.17
SYDE2-202ENST00000341460 SETQ01105 290 aaPredicted RBP22.36■■□□□ 1.17
SYDE2-202ENST00000341460 GOLGA6L1Q8N7Z2 621 aa22.36■■□□□ 1.17
SYDE2-202ENST00000341460 NUDCQ9Y266 331 aa22.36■■□□□ 1.17
SYDE2-202ENST00000341460 SLKQ9H2G2 1235 aaPredicted RBP22.35■■□□□ 1.17
SYDE2-202ENST00000341460 ZNF771Q7L3S4 317 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms