RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 JPH4Q96JJ6 628 aa29.56■■■□□ 2.32
BRCC3-202ENST00000340647 PRG4Q92954 1404 aaPredicted RBP29.54■■■□□ 2.32
BRCC3-202ENST00000340647 CARMIL1Q5VZK9 1371 aa29.5■■■□□ 2.31
BRCC3-202ENST00000340647 KIAA0586Q9BVV6 1533 aa29.48■■■□□ 2.31
BRCC3-202ENST00000340647 RAPGEF2Q9Y4G8 1499 aa29.27■■■□□ 2.28
BRCC3-202ENST00000340647 ADCY10Q96PN6 1610 aa29.26■■■□□ 2.27
BRCC3-202ENST00000340647 IQGAP2Q13576 1575 aa29.26■■■□□ 2.27
BRCC3-202ENST00000340647 KIF13AQ9H1H9 1805 aa29.22■■■□□ 2.27
BRCC3-202ENST00000340647 AEBP2Q6ZN18 517 aaPredicted RBP29.22■■■□□ 2.27
BRCC3-202ENST00000340647 DISP1Q96F81 1524 aa29.17■■■□□ 2.26
BRCC3-202ENST00000340647 PRXQ9BXM0 1461 aa29.13■■■□□ 2.25
BRCC3-202ENST00000340647 UGGT2Q9NYU1 1516 aa29.12■■■□□ 2.25
BRCC3-202ENST00000340647 CTTNBP2Q8WZ74 1663 aa29.1■■■□□ 2.25
BRCC3-202ENST00000340647 PTPRGP23470 1445 aa29.1■■■□□ 2.25
BRCC3-202ENST00000340647 MAPKBP1O60336 1514 aa29.09■■■□□ 2.25
BRCC3-202ENST00000340647 TNIKQ9UKE5 1360 aa29.08■■■□□ 2.25
BRCC3-202ENST00000340647 CARMIL2Q6F5E8 1435 aa29.07■■■□□ 2.24
BRCC3-202ENST00000340647 KIAA0556O60303 1618 aa29.02■■■□□ 2.24
BRCC3-202ENST00000340647 ABCC10Q5T3U5 1492 aa29.02■■■□□ 2.24
BRCC3-202ENST00000340647 DIP2BQ9P265 1576 aa29■■■□□ 2.23
BRCC3-202ENST00000340647 TTBK1Q5TCY1 1321 aaPredicted RBP28.99■■■□□ 2.23
BRCC3-202ENST00000340647 NPM1P06748 294 aaKnown RBP eCLIP28.95■■■□□ 2.22
BRCC3-202ENST00000340647 UHRF1BP1LA0JNW5 1464 aa28.95■■■□□ 2.22
BRCC3-202ENST00000340647 ABCC2Q92887 1545 aa28.94■■■□□ 2.22
BRCC3-202ENST00000340647 UACAQ9BZF9 1416 aa28.91■■■□□ 2.22
BRCC3-202ENST00000340647 FAM69CQ0P6D2 419 aa28.9■■■□□ 2.22
BRCC3-202ENST00000340647 CSRNP3Q8WYN3 585 aa28.9■■■□□ 2.22
BRCC3-202ENST00000340647 KDM5BQ9UGL1 1544 aa28.84■■■□□ 2.21
BRCC3-202ENST00000340647 TSPOAP1O95153 1857 aa28.8■■■□□ 2.2
BRCC3-202ENST00000340647 ZCCHC11Q5TAX3 1644 aaKnown RBP28.8■■■□□ 2.2
BRCC3-202ENST00000340647 ASXL2Q76L83 1435 aa28.8■■■□□ 2.2
BRCC3-202ENST00000340647 PLB1Q6P1J6 1458 aa28.79■■■□□ 2.2
BRCC3-202ENST00000340647 EEA1Q15075 1411 aa28.79■■■□□ 2.2
BRCC3-202ENST00000340647 GOLGA3Q08378 1498 aa28.78■■■□□ 2.2
BRCC3-202ENST00000340647 ABCA8O94911 1581 aa28.77■■■□□ 2.2
BRCC3-202ENST00000340647 CHIC1Q5VXU3 224 aa28.75■■■□□ 2.19
BRCC3-202ENST00000340647 PPRC1Q5VV67 1664 aaKnown RBP28.74■■■□□ 2.19
BRCC3-202ENST00000340647 GLI2P10070 1586 aa28.73■■■□□ 2.19
BRCC3-202ENST00000340647 SAMD9Q5K651 1589 aa28.71■■■□□ 2.19
BRCC3-202ENST00000340647 FAM9AQ8IZU1 332 aaPredicted RBP28.71■■■□□ 2.19
BRCC3-202ENST00000340647 KIF21BO75037 1637 aa28.66■■■□□ 2.18
BRCC3-202ENST00000340647 EPRSP07814 1512 aaKnown RBP28.66■■■□□ 2.18
BRCC3-202ENST00000340647 P3H3Q8IVL6 736 aa28.63■■■□□ 2.17
BRCC3-202ENST00000340647 MAP3K4Q9Y6R4 1608 aa28.62■■■□□ 2.17
BRCC3-202ENST00000340647 KDM6BO15054 1643 aa28.61■■■□□ 2.17
BRCC3-202ENST00000340647 WDR7Q9Y4E6 1490 aa28.57■■■□□ 2.16
BRCC3-202ENST00000340647 KDM4FA0A1W2PPD8 638 aa28.56■■■□□ 2.16
BRCC3-202ENST00000340647 ATP10BO94823 1461 aa28.51■■■□□ 2.15
BRCC3-202ENST00000340647 COL17A1Q9UMD9 1497 aaPredicted RBP28.48■■■□□ 2.15
BRCC3-202ENST00000340647 RAPGEF6Q8TEU7 1601 aa28.48■■■□□ 2.15
BRCC3-202ENST00000340647 FHOD3Q2V2M9 1422 aa28.47■■■□□ 2.15
BRCC3-202ENST00000340647 RANGAP1P46060 587 aaPredicted RBP28.45■■■□□ 2.14
BRCC3-202ENST00000340647 ARID3CA6NKF2 412 aa28.43■■■□□ 2.14
BRCC3-202ENST00000340647 CFAP43Q8NDM7 1665 aa28.42■■■□□ 2.14
BRCC3-202ENST00000340647 NUP153P49790 1475 aaKnown RBP28.4■■■□□ 2.14
BRCC3-202ENST00000340647 EFCAB5A4FU69 1503 aa28.38■■■□□ 2.13
BRCC3-202ENST00000340647 KCNH8Q96L42 1107 aa28.38■■■□□ 2.13
BRCC3-202ENST00000340647 EHMT2Q96KQ7 1210 aa28.37■■■□□ 2.13
BRCC3-202ENST00000340647 TEX14Q8IWB6 1497 aa28.34■■■□□ 2.13
BRCC3-202ENST00000340647 MAGI3Q5TCQ9 1506 aa28.34■■■□□ 2.13
BRCC3-202ENST00000340647 CD109Q6YHK3 1445 aa28.34■■■□□ 2.13
BRCC3-202ENST00000340647 ABCA9Q8IUA7 1624 aa28.29■■■□□ 2.12
BRCC3-202ENST00000340647 ARHGAP35Q9NRY4 1499 aa28.28■■■□□ 2.12
BRCC3-202ENST00000340647 UBTFP17480 764 aaKnown RBP28.28■■■□□ 2.12
BRCC3-202ENST00000340647 ADGRL1O94910 1474 aa28.2■■■□□ 2.1
BRCC3-202ENST00000340647 CDK13Q14004 1512 aaKnown RBP28.16■■■□□ 2.1
BRCC3-202ENST00000340647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.14■■■□□ 2.1
BRCC3-202ENST00000340647 HNRNPUL2Q1KMD3 747 aaKnown RBP28.14■■■□□ 2.1
BRCC3-202ENST00000340647 LRRIQ1Q96JM4 1722 aa28.13■■■□□ 2.09
BRCC3-202ENST00000340647 ARAP3Q8WWN8 1544 aa28.13■■■□□ 2.09
BRCC3-202ENST00000340647 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.08■■■□□ 2.09
BRCC3-202ENST00000340647 FMN1Q68DA7 1419 aa28.08■■■□□ 2.09
BRCC3-202ENST00000340647 PLEKHD1A6NEE1 506 aa28.06■■■□□ 2.08
BRCC3-202ENST00000340647 TTC37Q6PGP7 1564 aa28.06■■■□□ 2.08
BRCC3-202ENST00000340647 HECW1Q76N89 1606 aa28.05■■■□□ 2.08
BRCC3-202ENST00000340647 NEO1Q92859 1461 aa28.02■■■□□ 2.08
BRCC3-202ENST00000340647 FRMPD1Q5SYB0 1578 aa28.02■■■□□ 2.08
BRCC3-202ENST00000340647 PHLDB1Q86UU1 1377 aa27.99■■■□□ 2.07
BRCC3-202ENST00000340647 ILDR1Q86SU0 546 aaPredicted RBP27.99■■■□□ 2.07
BRCC3-202ENST00000340647 RAPGEF3O95398 923 aa27.95■■■□□ 2.06
BRCC3-202ENST00000340647 PCF11O94913 1555 aaKnown RBP27.94■■■□□ 2.06
BRCC3-202ENST00000340647 KIF14Q15058 1648 aa27.94■■■□□ 2.06
BRCC3-202ENST00000340647 RICTORQ6R327 1708 aa27.93■■■□□ 2.06
BRCC3-202ENST00000340647 HECW2Q9P2P5 1572 aa27.92■■■□□ 2.06
BRCC3-202ENST00000340647 ATP1B4Q9UN42 357 aaPredicted RBP27.92■■■□□ 2.06
BRCC3-202ENST00000340647 FANCAO15360 1455 aa27.89■■■□□ 2.06
BRCC3-202ENST00000340647 AKNAQ7Z591 1439 aa27.89■■■□□ 2.06
BRCC3-202ENST00000340647 CASKIN1Q8WXD9 1431 aa27.89■■■□□ 2.06
BRCC3-202ENST00000340647 CFAP74Q9C0B2 1584 aa27.86■■■□□ 2.05
BRCC3-202ENST00000340647 PLCH2O75038 1416 aa27.86■■■□□ 2.05
BRCC3-202ENST00000340647 CLIP1P30622 1438 aa27.85■■■□□ 2.05
BRCC3-202ENST00000340647 TROQ12816 1431 aaPredicted RBP27.85■■■□□ 2.05
BRCC3-202ENST00000340647 MYO5CQ9NQX4 1742 aa27.84■■■□□ 2.05
BRCC3-202ENST00000340647 DENND4BO75064 1496 aaPredicted RBP27.81■■■□□ 2.04
BRCC3-202ENST00000340647 FYCO1Q9BQS8 1478 aa27.77■■■□□ 2.04
BRCC3-202ENST00000340647 CDK11AQ9UQ88 783 aaPredicted RBP27.77■■■□□ 2.04
BRCC3-202ENST00000340647 CDC42BPBQ9Y5S2 1711 aa27.77■■■□□ 2.04
BRCC3-202ENST00000340647 SIGLEC1Q9BZZ2 1709 aa27.76■■■□□ 2.03
BRCC3-202ENST00000340647 ZMYM4Q5VZL5 1548 aa27.76■■■□□ 2.03
BRCC3-202ENST00000340647 CCDC18Q5T9S5 1454 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms