RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 KIF27Q86VH2 1401 aa28.61■■■□□ 2.17
H3F3C-201ENST00000340398 AEBP2Q6ZN18 517 aaPredicted RBP28.58■■■□□ 2.17
H3F3C-201ENST00000340398 KIAA0586Q9BVV6 1533 aa28.54■■■□□ 2.16
H3F3C-201ENST00000340398 KIF13AQ9H1H9 1805 aa28.54■■■□□ 2.16
H3F3C-201ENST00000340398 NPM1P06748 294 aaKnown RBP eCLIP28.53■■■□□ 2.16
H3F3C-201ENST00000340398 FAM69CQ0P6D2 419 aa28.5■■■□□ 2.15
H3F3C-201ENST00000340398 CUL7Q14999 1698 aa28.48■■■□□ 2.15
H3F3C-201ENST00000340398 CARMIL1Q5VZK9 1371 aa28.48■■■□□ 2.15
H3F3C-201ENST00000340398 TTBK1Q5TCY1 1321 aaPredicted RBP28.44■■■□□ 2.14
H3F3C-201ENST00000340398 ADCY10Q96PN6 1610 aa28.43■■■□□ 2.14
H3F3C-201ENST00000340398 ABCC10Q5T3U5 1492 aa28.4■■■□□ 2.14
H3F3C-201ENST00000340398 MAPKBP1O60336 1514 aa28.35■■■□□ 2.13
H3F3C-201ENST00000340398 PTPRGP23470 1445 aa28.35■■■□□ 2.13
H3F3C-201ENST00000340398 DIP2BQ9P265 1576 aa28.3■■■□□ 2.12
H3F3C-201ENST00000340398 TNIKQ9UKE5 1360 aa28.26■■■□□ 2.12
H3F3C-201ENST00000340398 CARMIL2Q6F5E8 1435 aa28.26■■■□□ 2.11
H3F3C-201ENST00000340398 IQGAP2Q13576 1575 aa28.22■■■□□ 2.11
H3F3C-201ENST00000340398 TSPOAP1O95153 1857 aa28.21■■■□□ 2.11
H3F3C-201ENST00000340398 RAPGEF2Q9Y4G8 1499 aa28.15■■■□□ 2.1
H3F3C-201ENST00000340398 DISP1Q96F81 1524 aa28.15■■■□□ 2.1
H3F3C-201ENST00000340398 ABCC2Q92887 1545 aa28.14■■■□□ 2.1
H3F3C-201ENST00000340398 ASXL2Q76L83 1435 aa28.1■■■□□ 2.09
H3F3C-201ENST00000340398 UACAQ9BZF9 1416 aa28.1■■■□□ 2.09
H3F3C-201ENST00000340398 KDM6BO15054 1643 aa28.08■■■□□ 2.09
H3F3C-201ENST00000340398 UHRF1BP1LA0JNW5 1464 aa28.06■■■□□ 2.08
H3F3C-201ENST00000340398 UGGT2Q9NYU1 1516 aa28.05■■■□□ 2.08
H3F3C-201ENST00000340398 PLB1Q6P1J6 1458 aa28.03■■■□□ 2.08
H3F3C-201ENST00000340398 KDM4FA0A1W2PPD8 638 aa28■■■□□ 2.07
H3F3C-201ENST00000340398 KIAA0556O60303 1618 aa27.96■■■□□ 2.07
H3F3C-201ENST00000340398 GLI2P10070 1586 aa27.96■■■□□ 2.07
H3F3C-201ENST00000340398 KDM5BQ9UGL1 1544 aa27.96■■■□□ 2.07
H3F3C-201ENST00000340398 PPRC1Q5VV67 1664 aaKnown RBP27.94■■■□□ 2.06
H3F3C-201ENST00000340398 ZCCHC11Q5TAX3 1644 aaKnown RBP27.91■■■□□ 2.06
H3F3C-201ENST00000340398 EPRSP07814 1512 aaKnown RBP27.91■■■□□ 2.06
H3F3C-201ENST00000340398 CTTNBP2Q8WZ74 1663 aa27.87■■■□□ 2.05
H3F3C-201ENST00000340398 PRXQ9BXM0 1461 aa27.85■■■□□ 2.05
H3F3C-201ENST00000340398 COL17A1Q9UMD9 1497 aaPredicted RBP27.85■■■□□ 2.05
H3F3C-201ENST00000340398 MAP3K4Q9Y6R4 1608 aa27.81■■■□□ 2.04
H3F3C-201ENST00000340398 KCNH8Q96L42 1107 aa27.8■■■□□ 2.04
H3F3C-201ENST00000340398 GOLGA3Q08378 1498 aa27.79■■■□□ 2.04
H3F3C-201ENST00000340398 P3H3Q8IVL6 736 aa27.78■■■□□ 2.04
H3F3C-201ENST00000340398 WDR7Q9Y4E6 1490 aa27.76■■■□□ 2.04
H3F3C-201ENST00000340398 ABCA8O94911 1581 aa27.75■■■□□ 2.03
H3F3C-201ENST00000340398 TEX14Q8IWB6 1497 aa27.72■■■□□ 2.03
H3F3C-201ENST00000340398 ARID3CA6NKF2 412 aa27.72■■■□□ 2.03
H3F3C-201ENST00000340398 CSRNP3Q8WYN3 585 aa27.71■■■□□ 2.03
H3F3C-201ENST00000340398 CD109Q6YHK3 1445 aa27.67■■■□□ 2.02
H3F3C-201ENST00000340398 ADGRL1O94910 1474 aa27.64■■■□□ 2.01
H3F3C-201ENST00000340398 FAM9AQ8IZU1 332 aaPredicted RBP27.6■■■□□ 2.01
H3F3C-201ENST00000340398 ATP10BO94823 1461 aa27.58■■■□□ 2.01
H3F3C-201ENST00000340398 MAGI3Q5TCQ9 1506 aa27.58■■■□□ 2.01
H3F3C-201ENST00000340398 RANGAP1P46060 587 aaPredicted RBP27.58■■■□□ 2.01
H3F3C-201ENST00000340398 CFAP43Q8NDM7 1665 aa27.57■■■□□ 2
H3F3C-201ENST00000340398 SAMD9Q5K651 1589 aa27.48■■□□□ 1.99
H3F3C-201ENST00000340398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.48■■□□□ 1.99
H3F3C-201ENST00000340398 HNRNPUL2Q1KMD3 747 aaKnown RBP27.48■■□□□ 1.99
H3F3C-201ENST00000340398 RAPGEF6Q8TEU7 1601 aa27.41■■□□□ 1.98
H3F3C-201ENST00000340398 EEA1Q15075 1411 aa27.41■■□□□ 1.98
H3F3C-201ENST00000340398 FHOD3Q2V2M9 1422 aa27.39■■□□□ 1.97
H3F3C-201ENST00000340398 ARAP3Q8WWN8 1544 aa27.38■■□□□ 1.97
H3F3C-201ENST00000340398 ABCA9Q8IUA7 1624 aa27.37■■□□□ 1.97
H3F3C-201ENST00000340398 RAPGEF3O95398 923 aa27.36■■□□□ 1.97
H3F3C-201ENST00000340398 NUP153P49790 1475 aaKnown RBP27.35■■□□□ 1.97
H3F3C-201ENST00000340398 EHMT2Q96KQ7 1210 aa27.34■■□□□ 1.97
H3F3C-201ENST00000340398 KIF21BO75037 1637 aa27.32■■□□□ 1.96
H3F3C-201ENST00000340398 PLEKHD1A6NEE1 506 aa27.29■■□□□ 1.96
H3F3C-201ENST00000340398 PHLDB1Q86UU1 1377 aa27.29■■□□□ 1.96
H3F3C-201ENST00000340398 HECW2Q9P2P5 1572 aa27.27■■□□□ 1.96
H3F3C-201ENST00000340398 ILDR1Q86SU0 546 aaPredicted RBP27.24■■□□□ 1.95
H3F3C-201ENST00000340398 NEO1Q92859 1461 aa27.23■■□□□ 1.95
H3F3C-201ENST00000340398 UBTFP17480 764 aaKnown RBP27.2■■□□□ 1.94
H3F3C-201ENST00000340398 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
H3F3C-201ENST00000340398 EFCAB5A4FU69 1503 aa27.16■■□□□ 1.94
H3F3C-201ENST00000340398 FRMPD1Q5SYB0 1578 aa27.15■■□□□ 1.94
H3F3C-201ENST00000340398 ATP1B4Q9UN42 357 aaPredicted RBP27.14■■□□□ 1.94
H3F3C-201ENST00000340398 ARID4BQ4LE39 1312 aaPredicted RBP27.14■■□□□ 1.93
H3F3C-201ENST00000340398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.12■■□□□ 1.93
H3F3C-201ENST00000340398 CDK13Q14004 1512 aaKnown RBP27.11■■□□□ 1.93
H3F3C-201ENST00000340398 AKNAQ7Z591 1439 aa27.11■■□□□ 1.93
H3F3C-201ENST00000340398 ADAMTSL3P82987 1691 aa27.09■■□□□ 1.93
H3F3C-201ENST00000340398 FANCAO15360 1455 aa27.08■■□□□ 1.93
H3F3C-201ENST00000340398 DENND4BO75064 1496 aaPredicted RBP27.08■■□□□ 1.93
H3F3C-201ENST00000340398 PTPRMP28827 1452 aa27.07■■□□□ 1.92
H3F3C-201ENST00000340398 TTC37Q6PGP7 1564 aa27.05■■□□□ 1.92
H3F3C-201ENST00000340398 RICTORQ6R327 1708 aa27.04■■□□□ 1.92
H3F3C-201ENST00000340398 BCORL1Q5H9F3 1711 aa27.02■■□□□ 1.92
H3F3C-201ENST00000340398 ARHGAP35Q9NRY4 1499 aa27.01■■□□□ 1.91
H3F3C-201ENST00000340398 MADDQ8WXG6 1647 aa26.98■■□□□ 1.91
H3F3C-201ENST00000340398 CFAP74Q9C0B2 1584 aa26.97■■□□□ 1.91
H3F3C-201ENST00000340398 PLCH2O75038 1416 aa26.97■■□□□ 1.91
H3F3C-201ENST00000340398 FMN1Q68DA7 1419 aa26.97■■□□□ 1.91
H3F3C-201ENST00000340398 ARHGEF40Q8TER5 1519 aa26.95■■□□□ 1.91
H3F3C-201ENST00000340398 YEATS2Q9ULM3 1422 aa26.95■■□□□ 1.9
H3F3C-201ENST00000340398 SCAPERQ9BY12 1400 aa26.94■■□□□ 1.9
H3F3C-201ENST00000340398 PLPPR3Q6T4P5 718 aa26.94■■□□□ 1.9
H3F3C-201ENST00000340398 MLECQ14165 292 aa26.91■■□□□ 1.9
H3F3C-201ENST00000340398 CDK11AQ9UQ88 783 aaPredicted RBP26.91■■□□□ 1.9
H3F3C-201ENST00000340398 HECW1Q76N89 1606 aa26.9■■□□□ 1.9
H3F3C-201ENST00000340398 EFCAB2Q5VUJ9 269 aa26.9■■□□□ 1.9
H3F3C-201ENST00000340398 SIGLEC1Q9BZZ2 1709 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms