RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 JPH4Q96JJ6 628 aa24.87■■□□□ 1.57
ERCC1-203ENST00000340192 PRG4Q92954 1404 aaPredicted RBP24.86■■□□□ 1.57
ERCC1-203ENST00000340192 KIAA0586Q9BVV6 1533 aa24.86■■□□□ 1.57
ERCC1-203ENST00000340192 RAPGEF2Q9Y4G8 1499 aa24.77■■□□□ 1.56
ERCC1-203ENST00000340192 IQGAP2Q13576 1575 aa24.72■■□□□ 1.55
ERCC1-203ENST00000340192 TRHP20396 242 aaPredicted RBP24.68■■□□□ 1.54
ERCC1-203ENST00000340192 PRXQ9BXM0 1461 aa24.64■■□□□ 1.53
ERCC1-203ENST00000340192 CTTNBP2Q8WZ74 1663 aa24.62■■□□□ 1.53
ERCC1-203ENST00000340192 CARMIL2Q6F5E8 1435 aa24.59■■□□□ 1.53
ERCC1-203ENST00000340192 ADCY10Q96PN6 1610 aa24.56■■□□□ 1.52
ERCC1-203ENST00000340192 UGGT2Q9NYU1 1516 aa24.56■■□□□ 1.52
ERCC1-203ENST00000340192 DISP1Q96F81 1524 aa24.55■■□□□ 1.52
ERCC1-203ENST00000340192 EEA1Q15075 1411 aa24.54■■□□□ 1.52
ERCC1-203ENST00000340192 CSRNP3Q8WYN3 585 aa24.54■■□□□ 1.52
ERCC1-203ENST00000340192 PTPRGP23470 1445 aa24.52■■□□□ 1.52
ERCC1-203ENST00000340192 CHIC1Q5VXU3 224 aa24.52■■□□□ 1.52
ERCC1-203ENST00000340192 TNIKQ9UKE5 1360 aa24.52■■□□□ 1.52
ERCC1-203ENST00000340192 TTBK1Q5TCY1 1321 aaPredicted RBP24.49■■□□□ 1.51
ERCC1-203ENST00000340192 KIAA0556O60303 1618 aa24.49■■□□□ 1.51
ERCC1-203ENST00000340192 NPM1P06748 294 aaKnown RBP eCLIP24.44■■□□□ 1.5
ERCC1-203ENST00000340192 FAM9AQ8IZU1 332 aaPredicted RBP24.44■■□□□ 1.5
ERCC1-203ENST00000340192 KIF13AQ9H1H9 1805 aa24.41■■□□□ 1.5
ERCC1-203ENST00000340192 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
ERCC1-203ENST00000340192 GOLGA3Q08378 1498 aa24.39■■□□□ 1.5
ERCC1-203ENST00000340192 UACAQ9BZF9 1416 aa24.35■■□□□ 1.49
ERCC1-203ENST00000340192 KIF21BO75037 1637 aa24.35■■□□□ 1.49
ERCC1-203ENST00000340192 UHRF1BP1LA0JNW5 1464 aa24.35■■□□□ 1.49
ERCC1-203ENST00000340192 ABCC2Q92887 1545 aa24.35■■□□□ 1.49
ERCC1-203ENST00000340192 ABCC10Q5T3U5 1492 aa24.31■■□□□ 1.48
ERCC1-203ENST00000340192 DIP2BQ9P265 1576 aa24.29■■□□□ 1.48
ERCC1-203ENST00000340192 SAMD9Q5K651 1589 aa24.26■■□□□ 1.47
ERCC1-203ENST00000340192 PLB1Q6P1J6 1458 aa24.26■■□□□ 1.47
ERCC1-203ENST00000340192 FAM69CQ0P6D2 419 aa24.25■■□□□ 1.47
ERCC1-203ENST00000340192 KDM5BQ9UGL1 1544 aa24.25■■□□□ 1.47
ERCC1-203ENST00000340192 ZCCHC11Q5TAX3 1644 aaKnown RBP24.24■■□□□ 1.47
ERCC1-203ENST00000340192 ABCA8O94911 1581 aa24.22■■□□□ 1.47
ERCC1-203ENST00000340192 ASXL2Q76L83 1435 aa24.22■■□□□ 1.47
ERCC1-203ENST00000340192 P3H3Q8IVL6 736 aa24.21■■□□□ 1.47
ERCC1-203ENST00000340192 RANGAP1P46060 587 aaPredicted RBP24.17■■□□□ 1.46
ERCC1-203ENST00000340192 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
ERCC1-203ENST00000340192 TSPOAP1O95153 1857 aa24.15■■□□□ 1.46
ERCC1-203ENST00000340192 UBTFP17480 764 aaKnown RBP24.11■■□□□ 1.45
ERCC1-203ENST00000340192 GLI2P10070 1586 aa24.1■■□□□ 1.45
ERCC1-203ENST00000340192 EFCAB5A4FU69 1503 aa24.1■■□□□ 1.45
ERCC1-203ENST00000340192 FHOD3Q2V2M9 1422 aa24.08■■□□□ 1.44
ERCC1-203ENST00000340192 RAPGEF6Q8TEU7 1601 aa24.07■■□□□ 1.44
ERCC1-203ENST00000340192 EPRSP07814 1512 aaKnown RBP24.07■■□□□ 1.44
ERCC1-203ENST00000340192 WDR7Q9Y4E6 1490 aa24.07■■□□□ 1.44
ERCC1-203ENST00000340192 PPRC1Q5VV67 1664 aaKnown RBP24.02■■□□□ 1.44
ERCC1-203ENST00000340192 MAP3K4Q9Y6R4 1608 aa24.02■■□□□ 1.44
ERCC1-203ENST00000340192 ARID3CA6NKF2 412 aa24.01■■□□□ 1.43
ERCC1-203ENST00000340192 ATP10BO94823 1461 aa24■■□□□ 1.43
ERCC1-203ENST00000340192 KDM6BO15054 1643 aa23.96■■□□□ 1.43
ERCC1-203ENST00000340192 NUP153P49790 1475 aaKnown RBP23.96■■□□□ 1.43
ERCC1-203ENST00000340192 KCNH8Q96L42 1107 aa23.94■■□□□ 1.42
ERCC1-203ENST00000340192 ARHGAP35Q9NRY4 1499 aa23.94■■□□□ 1.42
ERCC1-203ENST00000340192 CFAP43Q8NDM7 1665 aa23.92■■□□□ 1.42
ERCC1-203ENST00000340192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.88■■□□□ 1.41
ERCC1-203ENST00000340192 HNRNPUL2Q1KMD3 747 aaKnown RBP23.88■■□□□ 1.41
ERCC1-203ENST00000340192 TEX14Q8IWB6 1497 aa23.87■■□□□ 1.41
ERCC1-203ENST00000340192 FMN1Q68DA7 1419 aa23.85■■□□□ 1.41
ERCC1-203ENST00000340192 CD109Q6YHK3 1445 aa23.85■■□□□ 1.41
ERCC1-203ENST00000340192 ABCA9Q8IUA7 1624 aa23.81■■□□□ 1.4
ERCC1-203ENST00000340192 MAGI3Q5TCQ9 1506 aa23.81■■□□□ 1.4
ERCC1-203ENST00000340192 HECW1Q76N89 1606 aa23.81■■□□□ 1.4
ERCC1-203ENST00000340192 CDK13Q14004 1512 aaKnown RBP23.79■■□□□ 1.4
ERCC1-203ENST00000340192 COL17A1Q9UMD9 1497 aaPredicted RBP23.76■■□□□ 1.39
ERCC1-203ENST00000340192 PLEKHD1A6NEE1 506 aa23.75■■□□□ 1.39
ERCC1-203ENST00000340192 ATP1B4Q9UN42 357 aaPredicted RBP23.75■■□□□ 1.39
ERCC1-203ENST00000340192 LRRIQ1Q96JM4 1722 aa23.73■■□□□ 1.39
ERCC1-203ENST00000340192 CLIP1P30622 1438 aa23.72■■□□□ 1.39
ERCC1-203ENST00000340192 PCF11O94913 1555 aaKnown RBP23.69■■□□□ 1.38
ERCC1-203ENST00000340192 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.67■■□□□ 1.38
ERCC1-203ENST00000340192 CASKIN1Q8WXD9 1431 aa23.66■■□□□ 1.38
ERCC1-203ENST00000340192 TTC37Q6PGP7 1564 aa23.65■■□□□ 1.38
ERCC1-203ENST00000340192 ARAP3Q8WWN8 1544 aa23.63■■□□□ 1.37
ERCC1-203ENST00000340192 CDK11AQ9UQ88 783 aaPredicted RBP23.61■■□□□ 1.37
ERCC1-203ENST00000340192 NEO1Q92859 1461 aa23.61■■□□□ 1.37
ERCC1-203ENST00000340192 FYCO1Q9BQS8 1478 aa23.61■■□□□ 1.37
ERCC1-203ENST00000340192 PHLDB1Q86UU1 1377 aa23.6■■□□□ 1.37
ERCC1-203ENST00000340192 CCDC18Q5T9S5 1454 aa23.59■■□□□ 1.37
ERCC1-203ENST00000340192 CEP162Q5TB80 1403 aa23.58■■□□□ 1.36
ERCC1-203ENST00000340192 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
ERCC1-203ENST00000340192 KIF14Q15058 1648 aa23.57■■□□□ 1.36
ERCC1-203ENST00000340192 TROQ12816 1431 aaPredicted RBP23.56■■□□□ 1.36
ERCC1-203ENST00000340192 CFAP74Q9C0B2 1584 aa23.56■■□□□ 1.36
ERCC1-203ENST00000340192 FANCAO15360 1455 aa23.54■■□□□ 1.36
ERCC1-203ENST00000340192 MYO5CQ9NQX4 1742 aa23.53■■□□□ 1.36
ERCC1-203ENST00000340192 LOC105371045A0A1W2PR82 267 aa23.53■■□□□ 1.36
ERCC1-203ENST00000340192 PLCH2O75038 1416 aa23.5■■□□□ 1.35
ERCC1-203ENST00000340192 AKNAQ7Z591 1439 aa23.5■■□□□ 1.35
ERCC1-203ENST00000340192 FRMPD1Q5SYB0 1578 aa23.49■■□□□ 1.35
ERCC1-203ENST00000340192 RAPGEF3O95398 923 aa23.49■■□□□ 1.35
ERCC1-203ENST00000340192 KDM4FA0A1W2PPD8 638 aa23.47■■□□□ 1.35
ERCC1-203ENST00000340192 RICTORQ6R327 1708 aa23.46■■□□□ 1.35
ERCC1-203ENST00000340192 DENND4BO75064 1496 aaPredicted RBP23.43■■□□□ 1.34
ERCC1-203ENST00000340192 ADGRL1O94910 1474 aa23.43■■□□□ 1.34
ERCC1-203ENST00000340192 CDC42BPBQ9Y5S2 1711 aa23.41■■□□□ 1.34
ERCC1-203ENST00000340192 ARHGAP5Q13017 1502 aa23.4■■□□□ 1.34
ERCC1-203ENST00000340192 EFCAB2Q5VUJ9 269 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms