RNA–Protein interactions for RNA: ENST00000339773.9

SEMA4F-201, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best) BASIC

Gene SEMA4F, Length 2,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-201ENST00000339773 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
SEMA4F-201ENST00000339773 PBRM1Q86U86 1689 aa23.91■■□□□ 1.42
SEMA4F-201ENST00000339773 CTTNBP2Q8WZ74 1663 aa23.91■■□□□ 1.42
SEMA4F-201ENST00000339773 IFT140Q96RY7 1462 aa23.91■■□□□ 1.42
SEMA4F-201ENST00000339773 HNRNPUL2Q1KMD3 747 aaKnown RBP23.91■■□□□ 1.42
SEMA4F-201ENST00000339773 KANK4Q5T7N3 995 aaPredicted RBP23.9■■□□□ 1.42
SEMA4F-201ENST00000339773 THOC2Q8NI27 1593 aaKnown RBP23.87■■□□□ 1.41
SEMA4F-201ENST00000339773 GRIN2BQ13224 1484 aa23.83■■□□□ 1.41
SEMA4F-201ENST00000339773 FHOD3Q2V2M9 1422 aa23.82■■□□□ 1.4
SEMA4F-201ENST00000339773 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
SEMA4F-201ENST00000339773 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
SEMA4F-201ENST00000339773 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
SEMA4F-201ENST00000339773 EFCAB5A4FU69 1503 aa23.78■■□□□ 1.4
SEMA4F-201ENST00000339773 EIF4G3O43432 1585 aaKnown RBP23.75■■□□□ 1.39
SEMA4F-201ENST00000339773 PCF11O94913 1555 aaKnown RBP23.72■■□□□ 1.39
SEMA4F-201ENST00000339773 SNAPC4Q5SXM2 1469 aa23.7■■□□□ 1.39
SEMA4F-201ENST00000339773 TIAM1Q13009 1591 aa23.68■■□□□ 1.38
SEMA4F-201ENST00000339773 SAMD9Q5K651 1589 aa23.66■■□□□ 1.38
SEMA4F-201ENST00000339773 IQGAP2Q13576 1575 aa23.61■■□□□ 1.37
SEMA4F-201ENST00000339773 MAP3K1Q13233 1512 aa23.61■■□□□ 1.37
SEMA4F-201ENST00000339773 FMN1Q68DA7 1419 aa23.61■■□□□ 1.37
SEMA4F-201ENST00000339773 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
SEMA4F-201ENST00000339773 FYCO1Q9BQS8 1478 aa23.61■■□□□ 1.37
SEMA4F-201ENST00000339773 CASKIN1Q8WXD9 1431 aa23.61■■□□□ 1.37
SEMA4F-201ENST00000339773 FBLN2P98095 1184 aa23.59■■□□□ 1.37
SEMA4F-201ENST00000339773 RRBP1Q9P2E9 1410 aaKnown RBP23.59■■□□□ 1.37
SEMA4F-201ENST00000339773 LRRC9Q6ZRR7 1453 aa23.59■■□□□ 1.37
SEMA4F-201ENST00000339773 CFAP43Q8NDM7 1665 aa23.57■■□□□ 1.36
SEMA4F-201ENST00000339773 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
SEMA4F-201ENST00000339773 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
SEMA4F-201ENST00000339773 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
SEMA4F-201ENST00000339773 ZNF316A6NFI3 1004 aaPredicted RBP23.54■■□□□ 1.36
SEMA4F-201ENST00000339773 PELP1Q8IZL8 1130 aaKnown RBP23.54■■□□□ 1.36
SEMA4F-201ENST00000339773 SYNJ2O15056 1496 aa23.5■■□□□ 1.35
SEMA4F-201ENST00000339773 CCNB3Q8WWL7 1395 aa23.49■■□□□ 1.35
SEMA4F-201ENST00000339773 KIAA0586Q9BVV6 1533 aa23.49■■□□□ 1.35
SEMA4F-201ENST00000339773 ITGAEP38570 1179 aa23.48■■□□□ 1.35
SEMA4F-201ENST00000339773 PHLDB1Q86UU1 1377 aa23.46■■□□□ 1.35
SEMA4F-201ENST00000339773 DHX57Q6P158 1386 aaKnown RBP23.46■■□□□ 1.35
SEMA4F-201ENST00000339773 UGGT2Q9NYU1 1516 aa23.45■■□□□ 1.34
SEMA4F-201ENST00000339773 ARID3CA6NKF2 412 aa23.45■■□□□ 1.34
SEMA4F-201ENST00000339773 LRRIQ1Q96JM4 1722 aa23.45■■□□□ 1.34
SEMA4F-201ENST00000339773 CEP170Q5SW79 1584 aa23.42■■□□□ 1.34
SEMA4F-201ENST00000339773 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
SEMA4F-201ENST00000339773 MTUS2Q5JR59 1369 aa23.4■■□□□ 1.34
SEMA4F-201ENST00000339773 DISP1Q96F81 1524 aa23.38■■□□□ 1.33
SEMA4F-201ENST00000339773 KIAA0556O60303 1618 aa23.37■■□□□ 1.33
SEMA4F-201ENST00000339773 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
SEMA4F-201ENST00000339773 HECW1Q76N89 1606 aa23.33■■□□□ 1.33
SEMA4F-201ENST00000339773 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.32
SEMA4F-201ENST00000339773 NUP160Q12769 1436 aa23.32■■□□□ 1.32
SEMA4F-201ENST00000339773 CCDC18Q5T9S5 1454 aa23.29■■□□□ 1.32
SEMA4F-201ENST00000339773 MAGI3Q5TCQ9 1506 aa23.29■■□□□ 1.32
SEMA4F-201ENST00000339773 CDK13Q14004 1512 aaKnown RBP23.28■■□□□ 1.32
SEMA4F-201ENST00000339773 JPH4Q96JJ6 628 aa23.28■■□□□ 1.32
SEMA4F-201ENST00000339773 EPRSP07814 1512 aaKnown RBP23.28■■□□□ 1.32
SEMA4F-201ENST00000339773 EHBP1L1Q8N3D4 1523 aa23.25■■□□□ 1.31
SEMA4F-201ENST00000339773 NCOA2Q15596 1464 aa23.25■■□□□ 1.31
SEMA4F-201ENST00000339773 ACIN1Q9UKV3 1341 aaKnown RBP23.23■■□□□ 1.31
SEMA4F-201ENST00000339773 SUPT6HQ7KZ85 1726 aaKnown RBP23.23■■□□□ 1.31
SEMA4F-201ENST00000339773 RAB3GAP2Q9H2M9 1393 aa23.22■■□□□ 1.31
SEMA4F-201ENST00000339773 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
SEMA4F-201ENST00000339773 FGD6Q6ZV73 1430 aa23.21■■□□□ 1.31
SEMA4F-201ENST00000339773 CARMIL2Q6F5E8 1435 aa23.2■■□□□ 1.31
SEMA4F-201ENST00000339773 RAPGEF6Q8TEU7 1601 aa23.19■■□□□ 1.3
SEMA4F-201ENST00000339773 CHD1O14646 1710 aa23.19■■□□□ 1.3
SEMA4F-201ENST00000339773 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
SEMA4F-201ENST00000339773 PLB1Q6P1J6 1458 aa23.17■■□□□ 1.3
SEMA4F-201ENST00000339773 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
SEMA4F-201ENST00000339773 MYOM3Q5VTT5 1437 aa23.16■■□□□ 1.3
SEMA4F-201ENST00000339773 MIER1Q8N108 512 aa23.15■■□□□ 1.3
SEMA4F-201ENST00000339773 CENPBP07199 599 aaPredicted RBP23.13■■□□□ 1.29
SEMA4F-201ENST00000339773 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.11■■□□□ 1.29
SEMA4F-201ENST00000339773 ARHGEF11O15085 1522 aa23.11■■□□□ 1.29
SEMA4F-201ENST00000339773 MAPKBP1O60336 1514 aa23.09■■□□□ 1.29
SEMA4F-201ENST00000339773 PRG4Q92954 1404 aaPredicted RBP23.09■■□□□ 1.29
SEMA4F-201ENST00000339773 PTPN23Q9H3S7 1636 aa23.06■■□□□ 1.28
SEMA4F-201ENST00000339773 PTPRKQ15262 1439 aa23.05■■□□□ 1.28
SEMA4F-201ENST00000339773 CDK11AQ9UQ88 783 aaPredicted RBP23.04■■□□□ 1.28
SEMA4F-201ENST00000339773 PTPRGP23470 1445 aa22.98■■□□□ 1.27
SEMA4F-201ENST00000339773 ABCA8O94911 1581 aa22.98■■□□□ 1.27
SEMA4F-201ENST00000339773 YTHDC1Q96MU7 727 aaKnown RBP22.97■■□□□ 1.27
SEMA4F-201ENST00000339773 ERCC6L2Q5T890 1561 aa22.96■■□□□ 1.27
SEMA4F-201ENST00000339773 TROQ12816 1431 aaPredicted RBP22.95■■□□□ 1.26
SEMA4F-201ENST00000339773 CHIC2Q9UKJ5 165 aa22.95■■□□□ 1.26
SEMA4F-201ENST00000339773 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
SEMA4F-201ENST00000339773 MIA2Q96PC5 1412 aa22.93■■□□□ 1.26
SEMA4F-201ENST00000339773 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
SEMA4F-201ENST00000339773 GTF3C3Q9Y5Q9 886 aa22.93■■□□□ 1.26
SEMA4F-201ENST00000339773 SHROOM2Q13796 1616 aa22.92■■□□□ 1.26
SEMA4F-201ENST00000339773 SIN3AQ96ST3 1273 aa22.92■■□□□ 1.26
SEMA4F-201ENST00000339773 ATP10BO94823 1461 aa22.91■■□□□ 1.26
SEMA4F-201ENST00000339773 KIF14Q15058 1648 aa22.89■■□□□ 1.26
SEMA4F-201ENST00000339773 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.25
SEMA4F-201ENST00000339773 RRP7BPQ9NSQ0 103 aa22.89■■□□□ 1.25
SEMA4F-201ENST00000339773 HFM1A2PYH4 1435 aa22.88■■□□□ 1.25
SEMA4F-201ENST00000339773 NAIPQ13075 1403 aa22.85■■□□□ 1.25
SEMA4F-201ENST00000339773 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
SEMA4F-201ENST00000339773 CFDP1Q9UEE9 299 aaPredicted RBP22.83■■□□□ 1.25
SEMA4F-201ENST00000339773 ADCY10Q96PN6 1610 aa22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms