RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 KIAA0586Q9BVV6 1533 aa41.35■■■■■ 4.21
FAM78B-201ENST00000338353 CYB5RLQ6IPT4 315 aa41.35■■■■■ 4.21
FAM78B-201ENST00000338353 EEA1Q15075 1411 aa41.34■■■■■ 4.21
FAM78B-201ENST00000338353 CSRNP3Q8WYN3 585 aa41.33■■■■■ 4.21
FAM78B-201ENST00000338353 JPH4Q96JJ6 628 aa41.33■■■■■ 4.21
FAM78B-201ENST00000338353 ERCC6L2Q5T890 1561 aa41.32■■■■■ 4.2
FAM78B-201ENST00000338353 FAM9AQ8IZU1 332 aaPredicted RBP41.32■■■■■ 4.2
FAM78B-201ENST00000338353 PRXQ9BXM0 1461 aa41.31■■■■■ 4.2
FAM78B-201ENST00000338353 PRG4Q92954 1404 aaPredicted RBP41.25■■■■■ 4.19
FAM78B-201ENST00000338353 IQGAP2Q13576 1575 aa41.16■■■■■ 4.18
FAM78B-201ENST00000338353 CTTNBP2Q8WZ74 1663 aa41.06■■■■■ 4.16
FAM78B-201ENST00000338353 KIF21BO75037 1637 aa40.94■■■■■ 4.14
FAM78B-201ENST00000338353 UGGT2Q9NYU1 1516 aa40.92■■■■■ 4.14
FAM78B-201ENST00000338353 CARMIL2Q6F5E8 1435 aa40.92■■■■■ 4.14
FAM78B-201ENST00000338353 DISP1Q96F81 1524 aa40.86■■■■■ 4.13
FAM78B-201ENST00000338353 EHMT2Q96KQ7 1210 aa40.83■■■■■ 4.13
FAM78B-201ENST00000338353 TTBK1Q5TCY1 1321 aaPredicted RBP40.8■■■■■ 4.12
FAM78B-201ENST00000338353 TNIKQ9UKE5 1360 aa40.78■■■■■ 4.12
FAM78B-201ENST00000338353 KIAA0556O60303 1618 aa40.76■■■■■ 4.12
FAM78B-201ENST00000338353 PTPRGP23470 1445 aa40.76■■■■■ 4.12
FAM78B-201ENST00000338353 GOLGA3Q08378 1498 aa40.7■■■■■ 4.11
FAM78B-201ENST00000338353 UBTFP17480 764 aaKnown RBP40.66■■■■■ 4.1
FAM78B-201ENST00000338353 RANGAP1P46060 587 aaPredicted RBP40.62■■■■■ 4.09
FAM78B-201ENST00000338353 ADCY10Q96PN6 1610 aa40.61■■■■■ 4.09
FAM78B-201ENST00000338353 P3H3Q8IVL6 736 aa40.56■■■■■ 4.08
FAM78B-201ENST00000338353 SAMD9Q5K651 1589 aa40.52■■■■■ 4.08
FAM78B-201ENST00000338353 TRHP20396 242 aaPredicted RBP40.49■■■■■ 4.07
FAM78B-201ENST00000338353 NPM1P06748 294 aaKnown RBP eCLIP40.48■■■■■ 4.07
FAM78B-201ENST00000338353 UACAQ9BZF9 1416 aa40.48■■■■■ 4.07
FAM78B-201ENST00000338353 ABCC2Q92887 1545 aa40.41■■■■■ 4.06
FAM78B-201ENST00000338353 UHRF1BP1LA0JNW5 1464 aa40.4■■■■■ 4.06
FAM78B-201ENST00000338353 PLB1Q6P1J6 1458 aa40.38■■■■■ 4.05
FAM78B-201ENST00000338353 EFCAB5A4FU69 1503 aa40.34■■■■■ 4.05
FAM78B-201ENST00000338353 FHOD3Q2V2M9 1422 aa40.34■■■■■ 4.05
FAM78B-201ENST00000338353 ABCA8O94911 1581 aa40.3■■■■■ 4.04
FAM78B-201ENST00000338353 MAPKBP1O60336 1514 aa40.28■■■■■ 4.04
FAM78B-201ENST00000338353 KDM5BQ9UGL1 1544 aa40.23■■■■■ 4.03
FAM78B-201ENST00000338353 ARHGAP35Q9NRY4 1499 aa40.2■■■■■ 4.03
FAM78B-201ENST00000338353 ZCCHC11Q5TAX3 1644 aaKnown RBP40.19■■■■■ 4.02
FAM78B-201ENST00000338353 RAPGEF6Q8TEU7 1601 aa40.13■■■■■ 4.01
FAM78B-201ENST00000338353 ASXL2Q76L83 1435 aa40.12■■■■■ 4.01
FAM78B-201ENST00000338353 KIF13AQ9H1H9 1805 aa40.12■■■■■ 4.01
FAM78B-201ENST00000338353 ABCC10Q5T3U5 1492 aa40.1■■■■■ 4.01
FAM78B-201ENST00000338353 ARID3CA6NKF2 412 aa40.1■■■■■ 4.01
FAM78B-201ENST00000338353 FAM69CQ0P6D2 419 aa40.06■■■■■ 4
FAM78B-201ENST00000338353 DIP2BQ9P265 1576 aa40.05■■■■■ 4
FAM78B-201ENST00000338353 LOC105371045A0A1W2PR82 267 aa40.05■■■■■ 4
FAM78B-201ENST00000338353 CLIP1P30622 1438 aa40■■■■□ 3.99
FAM78B-201ENST00000338353 ATP10BO94823 1461 aa39.99■■■■□ 3.99
FAM78B-201ENST00000338353 NUP153P49790 1475 aaKnown RBP39.98■■■■□ 3.99
FAM78B-201ENST00000338353 FMN1Q68DA7 1419 aa39.98■■■■□ 3.99
FAM78B-201ENST00000338353 WDR7Q9Y4E6 1490 aa39.92■■■■□ 3.98
FAM78B-201ENST00000338353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.9■■■■□ 3.98
FAM78B-201ENST00000338353 HNRNPUL2Q1KMD3 747 aaKnown RBP39.9■■■■□ 3.98
FAM78B-201ENST00000338353 EPRSP07814 1512 aaKnown RBP39.88■■■■□ 3.97
FAM78B-201ENST00000338353 ATP1B4Q9UN42 357 aaPredicted RBP39.86■■■■□ 3.97
FAM78B-201ENST00000338353 CEP162Q5TB80 1403 aa39.85■■■■□ 3.97
FAM78B-201ENST00000338353 GLI2P10070 1586 aa39.82■■■■□ 3.97
FAM78B-201ENST00000338353 KCNH8Q96L42 1107 aa39.81■■■■□ 3.96
FAM78B-201ENST00000338353 HECW1Q76N89 1606 aa39.8■■■■□ 3.96
FAM78B-201ENST00000338353 TSPOAP1O95153 1857 aa39.79■■■■□ 3.96
FAM78B-201ENST00000338353 CDK13Q14004 1512 aaKnown RBP39.75■■■■□ 3.95
FAM78B-201ENST00000338353 PCF11O94913 1555 aaKnown RBP39.73■■■■□ 3.95
FAM78B-201ENST00000338353 CASKIN1Q8WXD9 1431 aa39.69■■■■□ 3.94
FAM78B-201ENST00000338353 MAP3K4Q9Y6R4 1608 aa39.67■■■■□ 3.94
FAM78B-201ENST00000338353 PLEKHD1A6NEE1 506 aa39.67■■■■□ 3.94
FAM78B-201ENST00000338353 LRRIQ1Q96JM4 1722 aa39.63■■■■□ 3.94
FAM78B-201ENST00000338353 PPRC1Q5VV67 1664 aaKnown RBP39.61■■■■□ 3.93
FAM78B-201ENST00000338353 FYCO1Q9BQS8 1478 aa39.6■■■■□ 3.93
FAM78B-201ENST00000338353 CFAP43Q8NDM7 1665 aa39.58■■■■□ 3.93
FAM78B-201ENST00000338353 CD109Q6YHK3 1445 aa39.55■■■■□ 3.92
FAM78B-201ENST00000338353 CDK11AQ9UQ88 783 aaPredicted RBP39.51■■■■□ 3.92
FAM78B-201ENST00000338353 CCDC18Q5T9S5 1454 aa39.51■■■■□ 3.92
FAM78B-201ENST00000338353 ABCA9Q8IUA7 1624 aa39.51■■■■□ 3.92
FAM78B-201ENST00000338353 TEX14Q8IWB6 1497 aa39.47■■■■□ 3.91
FAM78B-201ENST00000338353 MAGI3Q5TCQ9 1506 aa39.44■■■■□ 3.9
FAM78B-201ENST00000338353 KDM6BO15054 1643 aa39.4■■■■□ 3.9
FAM78B-201ENST00000338353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.39■■■■□ 3.9
FAM78B-201ENST00000338353 TROQ12816 1431 aaPredicted RBP39.39■■■■□ 3.9
FAM78B-201ENST00000338353 TTC37Q6PGP7 1564 aa39.35■■■■□ 3.89
FAM78B-201ENST00000338353 VPS8Q8N3P4 1428 aa39.35■■■■□ 3.89
FAM78B-201ENST00000338353 KIF14Q15058 1648 aa39.32■■■■□ 3.88
FAM78B-201ENST00000338353 COL17A1Q9UMD9 1497 aaPredicted RBP39.25■■■■□ 3.87
FAM78B-201ENST00000338353 MTUS2Q5JR59 1369 aa39.16■■■■□ 3.86
FAM78B-201ENST00000338353 NEO1Q92859 1461 aa39.16■■■■□ 3.86
FAM78B-201ENST00000338353 MYO5CQ9NQX4 1742 aa39.16■■■■□ 3.86
FAM78B-201ENST00000338353 PLCH2O75038 1416 aa39.14■■■■□ 3.86
FAM78B-201ENST00000338353 FANCAO15360 1455 aa39.14■■■■□ 3.86
FAM78B-201ENST00000338353 PHLDB1Q86UU1 1377 aa39.12■■■■□ 3.85
FAM78B-201ENST00000338353 ARAP3Q8WWN8 1544 aa39.09■■■■□ 3.85
FAM78B-201ENST00000338353 TIAM1Q13009 1591 aa39.09■■■■□ 3.85
FAM78B-201ENST00000338353 CFAP74Q9C0B2 1584 aa39.08■■■■□ 3.85
FAM78B-201ENST00000338353 EHBP1L1Q8N3D4 1523 aa39.06■■■■□ 3.84
FAM78B-201ENST00000338353 AKNAQ7Z591 1439 aa39.05■■■■□ 3.84
FAM78B-201ENST00000338353 ARHGAP5Q13017 1502 aa39.02■■■■□ 3.84
FAM78B-201ENST00000338353 EFCAB2Q5VUJ9 269 aa39■■■■□ 3.83
FAM78B-201ENST00000338353 CDC42BPBQ9Y5S2 1711 aa38.99■■■■□ 3.83
FAM78B-201ENST00000338353 PREX2Q70Z35 1606 aa38.98■■■■□ 3.83
FAM78B-201ENST00000338353 CDC42BPAQ5VT25 1732 aa38.98■■■■□ 3.83
FAM78B-201ENST00000338353 RAPGEF3O95398 923 aa38.97■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms