RNA–Protein interactions for RNA: ENST00000338056.7

RUNDC3B-202, Transcript of RUN domain containing 3B, humanhuman

TSL 2 BASIC

Gene RUNDC3B, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3B-202ENST00000338056 SENP3Q9H4L4 574 aaPredicted RBP21.75■■□□□ 1.07
RUNDC3B-202ENST00000338056 TSPY4P0CV99 314 aa21.73■■□□□ 1.07
RUNDC3B-202ENST00000338056 TSPY10P0CW01 314 aa21.73■■□□□ 1.07
RUNDC3B-202ENST00000338056 CARMIL1Q5VZK9 1371 aa21.73■■□□□ 1.07
RUNDC3B-202ENST00000338056 KCNH8Q96L42 1107 aa21.73■■□□□ 1.07
RUNDC3B-202ENST00000338056 MRS2Q9HD23 443 aa21.71■■□□□ 1.07
RUNDC3B-202ENST00000338056 CCNB3Q8WWL7 1395 aa21.68■■□□□ 1.06
RUNDC3B-202ENST00000338056 RGL3Q3MIN7 710 aa21.67■■□□□ 1.06
RUNDC3B-202ENST00000338056 VPS8Q8N3P4 1428 aa21.66■■□□□ 1.06
RUNDC3B-202ENST00000338056 EIF4G2P78344 907 aaKnown RBP eCLIP21.64■■□□□ 1.06
RUNDC3B-202ENST00000338056 TMC1Q8TDI8 760 aa21.62■■□□□ 1.05
RUNDC3B-202ENST00000338056 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
RUNDC3B-202ENST00000338056 CFDP1Q9UEE9 299 aaPredicted RBP21.6■■□□□ 1.05
RUNDC3B-202ENST00000338056 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.05
RUNDC3B-202ENST00000338056 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.05
RUNDC3B-202ENST00000338056 RTL5Q5HYW3 569 aaPredicted RBP21.58■■□□□ 1.05
RUNDC3B-202ENST00000338056 NPM2Q86SE8 214 aaKnown RBP21.58■■□□□ 1.05
RUNDC3B-202ENST00000338056 PLEKHD1A6NEE1 506 aa21.57■■□□□ 1.04
RUNDC3B-202ENST00000338056 FOXD1Q16676 465 aa21.56■■□□□ 1.04
RUNDC3B-202ENST00000338056 PLPPR3Q6T4P5 718 aa21.55■■□□□ 1.04
RUNDC3B-202ENST00000338056 CANXP27824 592 aaKnown RBP21.51■■□□□ 1.03
RUNDC3B-202ENST00000338056 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
RUNDC3B-202ENST00000338056 SUPT16HQ9Y5B9 1047 aaKnown RBP21.45■■□□□ 1.02
RUNDC3B-202ENST00000338056 NPM1P06748 294 aaKnown RBP eCLIP21.45■■□□□ 1.02
RUNDC3B-202ENST00000338056 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
RUNDC3B-202ENST00000338056 SMARCA2P51531 1590 aa21.43■■□□□ 1.02
RUNDC3B-202ENST00000338056 SLC24A1O60721 1099 aa21.42■■□□□ 1.02
RUNDC3B-202ENST00000338056 RAB3GAP2Q9H2M9 1393 aa21.42■■□□□ 1.02
RUNDC3B-202ENST00000338056 EIF4G1Q04637 1599 aaKnown RBP21.42■■□□□ 1.02
RUNDC3B-202ENST00000338056 CCDC136Q96JN2 1154 aa21.41■■□□□ 1.02
RUNDC3B-202ENST00000338056 FHAD1B1AJZ9 1412 aa21.4■■□□□ 1.02
RUNDC3B-202ENST00000338056 STAG3Q9UJ98 1225 aa21.37■■□□□ 1.01
RUNDC3B-202ENST00000338056 FHOD3Q2V2M9 1422 aa21.35■■□□□ 1.01
RUNDC3B-202ENST00000338056 CARD11Q9BXL7 1154 aa21.35■■□□□ 1.01
RUNDC3B-202ENST00000338056 SETD5Q9C0A6 1442 aa21.35■■□□□ 1.01
RUNDC3B-202ENST00000338056 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
RUNDC3B-202ENST00000338056 ANP32AP39687 249 aaKnown RBP21.31■■□□□ 1
RUNDC3B-202ENST00000338056 ERCC6Q03468 1493 aa21.29■■□□□ 1
RUNDC3B-202ENST00000338056 DCAF11Q8TEB1 546 aa21.26■□□□□ 0.99
RUNDC3B-202ENST00000338056 HSPA5P11021 654 aaKnown RBP21.25■□□□□ 0.99
RUNDC3B-202ENST00000338056 WDR43Q15061 677 aaKnown RBP eCLIP21.25■□□□□ 0.99
RUNDC3B-202ENST00000338056 ESF1Q9H501 851 aaKnown RBP21.24■□□□□ 0.99
RUNDC3B-202ENST00000338056 NEFMP07197 916 aa21.23■□□□□ 0.99
RUNDC3B-202ENST00000338056 ARHGAP35Q9NRY4 1499 aa21.23■□□□□ 0.99
RUNDC3B-202ENST00000338056 NBR1Q14596 966 aa21.22■□□□□ 0.99
RUNDC3B-202ENST00000338056 PPP1R15AO75807 674 aaPredicted RBP21.21■□□□□ 0.99
RUNDC3B-202ENST00000338056 DHX57Q6P158 1386 aaKnown RBP21.2■□□□□ 0.98
RUNDC3B-202ENST00000338056 PKD2Q13563 968 aa21.2■□□□□ 0.98
RUNDC3B-202ENST00000338056 MPHOSPH9Q99550 1183 aa21.18■□□□□ 0.98
RUNDC3B-202ENST00000338056 CC2D1BQ5T0F9 858 aaKnown RBP21.16■□□□□ 0.98
RUNDC3B-202ENST00000338056 B4GALNT3Q6L9W6 998 aa21.15■□□□□ 0.98
RUNDC3B-202ENST00000338056 ZBTB47Q9UFB7 747 aaPredicted RBP21.15■□□□□ 0.98
RUNDC3B-202ENST00000338056 L3MBTL2Q969R5 705 aa21.14■□□□□ 0.98
RUNDC3B-202ENST00000338056 IGF1RP08069 1367 aa21.14■□□□□ 0.97
RUNDC3B-202ENST00000338056 NEUROD2Q15784 382 aa21.13■□□□□ 0.97
RUNDC3B-202ENST00000338056 TNNT2P45379 298 aaPredicted RBP21.12■□□□□ 0.97
RUNDC3B-202ENST00000338056 PLEKHG5O94827 1062 aa21.12■□□□□ 0.97
RUNDC3B-202ENST00000338056 PDS5BQ9NTI5 1447 aa21.11■□□□□ 0.97
RUNDC3B-202ENST00000338056 TIMELESSQ9UNS1 1208 aa21.1■□□□□ 0.97
RUNDC3B-202ENST00000338056 FMN1Q68DA7 1419 aa21.09■□□□□ 0.97
RUNDC3B-202ENST00000338056 RAD54L2Q9Y4B4 1467 aa21.07■□□□□ 0.96
RUNDC3B-202ENST00000338056 KNSTRNQ9Y448 316 aa21.06■□□□□ 0.96
RUNDC3B-202ENST00000338056 HNRNPMP52272 730 aaKnown RBP eCLIP21.05■□□□□ 0.96
RUNDC3B-202ENST00000338056 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
RUNDC3B-202ENST00000338056 PPM1GO15355 546 aaPredicted RBP21.01■□□□□ 0.95
RUNDC3B-202ENST00000338056 NUP155O75694 1391 aa21.01■□□□□ 0.95
RUNDC3B-202ENST00000338056 JPH4Q96JJ6 628 aa20.99■□□□□ 0.95
RUNDC3B-202ENST00000338056 FGD5Q6ZNL6 1462 aa20.99■□□□□ 0.95
RUNDC3B-202ENST00000338056 CCER2I3L3R5 266 aa20.97■□□□□ 0.95
RUNDC3B-202ENST00000338056 SAFB2Q14151 953 aaKnown RBP eCLIP20.97■□□□□ 0.95
RUNDC3B-202ENST00000338056 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.95
RUNDC3B-202ENST00000338056 SYNJ1O43426 1573 aa20.95■□□□□ 0.94
RUNDC3B-202ENST00000338056 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.95■□□□□ 0.94
RUNDC3B-202ENST00000338056 PHLDB1Q86UU1 1377 aa20.95■□□□□ 0.94
RUNDC3B-202ENST00000338056 KIF21BO75037 1637 aa20.94■□□□□ 0.94
RUNDC3B-202ENST00000338056 GGT6Q6P531 493 aa20.94■□□□□ 0.94
RUNDC3B-202ENST00000338056 ARXQ96QS3 562 aa20.94■□□□□ 0.94
RUNDC3B-202ENST00000338056 ARAP1Q96P48 1450 aa20.92■□□□□ 0.94
RUNDC3B-202ENST00000338056 PPP4R2Q9NY27 417 aa20.92■□□□□ 0.94
RUNDC3B-202ENST00000338056 DNAJC5BQ9UF47 199 aa20.87■□□□□ 0.93
RUNDC3B-202ENST00000338056 MLECQ14165 292 aa20.87■□□□□ 0.93
RUNDC3B-202ENST00000338056 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
RUNDC3B-202ENST00000338056 RGS3P49796 1198 aa20.86■□□□□ 0.93
RUNDC3B-202ENST00000338056 CARMIL2Q6F5E8 1435 aa20.85■□□□□ 0.93
RUNDC3B-202ENST00000338056 TMF1P82094 1093 aa20.85■□□□□ 0.93
RUNDC3B-202ENST00000338056 FRAT1Q92837 279 aaPredicted RBP20.85■□□□□ 0.93
RUNDC3B-202ENST00000338056 HSP90AA1P07900 732 aaKnown RBP20.83■□□□□ 0.93
RUNDC3B-202ENST00000338056 CDCA8Q53HL2 280 aa20.83■□□□□ 0.93
RUNDC3B-202ENST00000338056 RBM19Q9Y4C8 960 aaKnown RBP20.83■□□□□ 0.92
RUNDC3B-202ENST00000338056 UPF2Q9HAU5 1272 aaKnown RBP20.82■□□□□ 0.92
RUNDC3B-202ENST00000338056 ARID4BQ4LE39 1312 aaPredicted RBP20.82■□□□□ 0.92
RUNDC3B-202ENST00000338056 NESP48681 1621 aa20.82■□□□□ 0.92
RUNDC3B-202ENST00000338056 ST20-MTHFSA0A0A6YYL1 179 aa20.81■□□□□ 0.92
RUNDC3B-202ENST00000338056 ZBTB7CA1YPR0 619 aa20.81■□□□□ 0.92
RUNDC3B-202ENST00000338056 ANKRD30AQ9BXX3 1397 aa20.8■□□□□ 0.92
RUNDC3B-202ENST00000338056 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.92
RUNDC3B-202ENST00000338056 C14orf37Q86TY3 774 aa20.79■□□□□ 0.92
RUNDC3B-202ENST00000338056 STK26Q9P289 416 aa20.79■□□□□ 0.92
RUNDC3B-202ENST00000338056 NUTM2DQ5VT03 806 aaPredicted RBP20.79■□□□□ 0.92
RUNDC3B-202ENST00000338056 POGKQ9P215 609 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms