RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
MS4A4A-201ENST00000337908 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
MS4A4A-201ENST00000337908 ZNF608Q9ULD9 1512 aaPredicted RBP16.95■□□□□ 0.3
MS4A4A-201ENST00000337908 APLP2Q06481 763 aa16.94■□□□□ 0.3
MS4A4A-201ENST00000337908 ARAP1Q96P48 1450 aa16.91■□□□□ 0.3
MS4A4A-201ENST00000337908 ARHGAP35Q9NRY4 1499 aa16.89■□□□□ 0.3
MS4A4A-201ENST00000337908 EFCAB5A4FU69 1503 aa16.89■□□□□ 0.29
MS4A4A-201ENST00000337908 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
MS4A4A-201ENST00000337908 MAGI1Q96QZ7 1491 aaPredicted RBP16.87■□□□□ 0.29
MS4A4A-201ENST00000337908 PPARGC1BQ86YN6 1023 aaKnown RBP16.86■□□□□ 0.29
MS4A4A-201ENST00000337908 IQGAP2Q13576 1575 aa16.79■□□□□ 0.28
MS4A4A-201ENST00000337908 SYNJ2O15056 1496 aa16.79■□□□□ 0.28
MS4A4A-201ENST00000337908 GRIN2AQ12879 1464 aa16.79■□□□□ 0.28
MS4A4A-201ENST00000337908 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
MS4A4A-201ENST00000337908 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.27
MS4A4A-201ENST00000337908 SAMD9Q5K651 1589 aa16.76■□□□□ 0.27
MS4A4A-201ENST00000337908 P3H3Q8IVL6 736 aa16.75■□□□□ 0.27
MS4A4A-201ENST00000337908 FHOD3Q2V2M9 1422 aa16.74■□□□□ 0.27
MS4A4A-201ENST00000337908 FMN1Q68DA7 1419 aa16.73■□□□□ 0.27
MS4A4A-201ENST00000337908 FBLN2P98095 1184 aa16.72■□□□□ 0.27
MS4A4A-201ENST00000337908 KIAA0586Q9BVV6 1533 aa16.71■□□□□ 0.27
MS4A4A-201ENST00000337908 PCF11O94913 1555 aaKnown RBP16.7■□□□□ 0.26
MS4A4A-201ENST00000337908 FYCO1Q9BQS8 1478 aa16.68■□□□□ 0.26
MS4A4A-201ENST00000337908 MAP3K1Q13233 1512 aa16.68■□□□□ 0.26
MS4A4A-201ENST00000337908 UGGT2Q9NYU1 1516 aa16.68■□□□□ 0.26
MS4A4A-201ENST00000337908 CASKIN1Q8WXD9 1431 aa16.66■□□□□ 0.26
MS4A4A-201ENST00000337908 ATP1B4Q9UN42 357 aaPredicted RBP16.66■□□□□ 0.26
MS4A4A-201ENST00000337908 TIAM1Q13009 1591 aa16.65■□□□□ 0.26
MS4A4A-201ENST00000337908 CEP170Q5SW79 1584 aa16.65■□□□□ 0.26
MS4A4A-201ENST00000337908 CFAP43Q8NDM7 1665 aa16.65■□□□□ 0.26
MS4A4A-201ENST00000337908 NUP160Q12769 1436 aa16.63■□□□□ 0.25
MS4A4A-201ENST00000337908 FOXD1Q16676 465 aa16.63■□□□□ 0.25
MS4A4A-201ENST00000337908 CHD1O14646 1710 aa16.62■□□□□ 0.25
MS4A4A-201ENST00000337908 KIAA0556O60303 1618 aa16.61■□□□□ 0.25
MS4A4A-201ENST00000337908 CARMIL2Q6F5E8 1435 aa16.57■□□□□ 0.24
MS4A4A-201ENST00000337908 HECW1Q76N89 1606 aa16.57■□□□□ 0.24
MS4A4A-201ENST00000337908 KANK4Q5T7N3 995 aaPredicted RBP16.57■□□□□ 0.24
MS4A4A-201ENST00000337908 LRRC9Q6ZRR7 1453 aa16.56■□□□□ 0.24
MS4A4A-201ENST00000337908 DISP1Q96F81 1524 aa16.54■□□□□ 0.24
MS4A4A-201ENST00000337908 CCDC18Q5T9S5 1454 aa16.54■□□□□ 0.24
MS4A4A-201ENST00000337908 JPH4Q96JJ6 628 aa16.52■□□□□ 0.24
MS4A4A-201ENST00000337908 HRCP23327 699 aa16.49■□□□□ 0.23
MS4A4A-201ENST00000337908 MTUS2Q5JR59 1369 aa16.49■□□□□ 0.23
MS4A4A-201ENST00000337908 LRRIQ1Q96JM4 1722 aa16.48■□□□□ 0.23
MS4A4A-201ENST00000337908 RAPGEF6Q8TEU7 1601 aa16.47■□□□□ 0.23
MS4A4A-201ENST00000337908 EHBP1L1Q8N3D4 1523 aa16.46■□□□□ 0.23
MS4A4A-201ENST00000337908 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
MS4A4A-201ENST00000337908 EPRSP07814 1512 aaKnown RBP16.44■□□□□ 0.22
MS4A4A-201ENST00000337908 SUPT6HQ7KZ85 1726 aaKnown RBP16.43■□□□□ 0.22
MS4A4A-201ENST00000337908 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
MS4A4A-201ENST00000337908 CCNB3Q8WWL7 1395 aa16.42■□□□□ 0.22
MS4A4A-201ENST00000337908 HNRNPUL2Q1KMD3 747 aaKnown RBP16.41■□□□□ 0.22
MS4A4A-201ENST00000337908 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
MS4A4A-201ENST00000337908 ZEB1P37275 1124 aaPredicted RBP16.41■□□□□ 0.22
MS4A4A-201ENST00000337908 CDK13Q14004 1512 aaKnown RBP16.38■□□□□ 0.21
MS4A4A-201ENST00000337908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
MS4A4A-201ENST00000337908 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
MS4A4A-201ENST00000337908 CLASP1Q7Z460 1538 aa16.37■□□□□ 0.21
MS4A4A-201ENST00000337908 NUP153P49790 1475 aaKnown RBP16.37■□□□□ 0.21
MS4A4A-201ENST00000337908 PHLDB1Q86UU1 1377 aa16.36■□□□□ 0.21
MS4A4A-201ENST00000337908 PTPRGP23470 1445 aa16.35■□□□□ 0.21
MS4A4A-201ENST00000337908 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
MS4A4A-201ENST00000337908 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
MS4A4A-201ENST00000337908 ARID3CA6NKF2 412 aa16.34■□□□□ 0.21
MS4A4A-201ENST00000337908 ABCA8O94911 1581 aa16.34■□□□□ 0.21
MS4A4A-201ENST00000337908 CCER1Q8TC90 406 aaPredicted RBP16.34■□□□□ 0.21
MS4A4A-201ENST00000337908 FAM50AQ14320 339 aaKnown RBP16.32■□□□□ 0.2
MS4A4A-201ENST00000337908 MAGI3Q5TCQ9 1506 aa16.31■□□□□ 0.2
MS4A4A-201ENST00000337908 MYOM3Q5VTT5 1437 aa16.3■□□□□ 0.2
MS4A4A-201ENST00000337908 FGD6Q6ZV73 1430 aa16.29■□□□□ 0.2
MS4A4A-201ENST00000337908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.28■□□□□ 0.2
MS4A4A-201ENST00000337908 ITGAEP38570 1179 aa16.28■□□□□ 0.2
MS4A4A-201ENST00000337908 ARHGEF11O15085 1522 aa16.27■□□□□ 0.19
MS4A4A-201ENST00000337908 TROQ12816 1431 aaPredicted RBP16.25■□□□□ 0.19
MS4A4A-201ENST00000337908 UACAQ9BZF9 1416 aa16.25■□□□□ 0.19
MS4A4A-201ENST00000337908 PTPN23Q9H3S7 1636 aa16.24■□□□□ 0.19
MS4A4A-201ENST00000337908 ERCC6L2Q5T890 1561 aa16.23■□□□□ 0.19
MS4A4A-201ENST00000337908 ADCY10Q96PN6 1610 aa16.23■□□□□ 0.19
MS4A4A-201ENST00000337908 PLEKHD1A6NEE1 506 aa16.23■□□□□ 0.19
MS4A4A-201ENST00000337908 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
MS4A4A-201ENST00000337908 ITSN2Q9NZM3 1697 aa16.22■□□□□ 0.19
MS4A4A-201ENST00000337908 MIA2Q96PC5 1412 aa16.21■□□□□ 0.19
MS4A4A-201ENST00000337908 ATP10BO94823 1461 aa16.21■□□□□ 0.19
MS4A4A-201ENST00000337908 ABCC2Q92887 1545 aa16.21■□□□□ 0.19
MS4A4A-201ENST00000337908 KIF14Q15058 1648 aa16.2■□□□□ 0.18
MS4A4A-201ENST00000337908 TCOF1Q13428 1488 aaKnown RBP16.18■□□□□ 0.18
MS4A4A-201ENST00000337908 MSH5O43196 834 aa16.16■□□□□ 0.18
MS4A4A-201ENST00000337908 UHRF1BP1LA0JNW5 1464 aa16.15■□□□□ 0.18
MS4A4A-201ENST00000337908 SETD5Q9C0A6 1442 aa16.15■□□□□ 0.18
MS4A4A-201ENST00000337908 ZCCHC11Q5TAX3 1644 aaKnown RBP16.1■□□□□ 0.17
MS4A4A-201ENST00000337908 RAB3GAP2Q9H2M9 1393 aa16.1■□□□□ 0.17
MS4A4A-201ENST00000337908 CFDP1Q9UEE9 299 aaPredicted RBP16.09■□□□□ 0.17
MS4A4A-201ENST00000337908 GPATCH8Q9UKJ3 1502 aaKnown RBP16.08■□□□□ 0.16
MS4A4A-201ENST00000337908 CDC42BPAQ5VT25 1732 aa16.08■□□□□ 0.16
MS4A4A-201ENST00000337908 ABCC10Q5T3U5 1492 aa16.07■□□□□ 0.16
MS4A4A-201ENST00000337908 CLSPNQ9HAW4 1339 aa16.07■□□□□ 0.16
MS4A4A-201ENST00000337908 KDM5BQ9UGL1 1544 aa16.07■□□□□ 0.16
MS4A4A-201ENST00000337908 DNMT1P26358 1616 aaKnown RBP16.06■□□□□ 0.16
MS4A4A-201ENST00000337908 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
MS4A4A-201ENST00000337908 DHX57Q6P158 1386 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms