RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 CUL7Q14999 1698 aa34.58■■■■□ 3.13
CLPTM1-201ENST00000337392 PCF11O94913 1555 aaKnown RBP34.57■■■■□ 3.13
CLPTM1-201ENST00000337392 TIAM1Q13009 1591 aa34.55■■■■□ 3.12
CLPTM1-201ENST00000337392 TARBP1Q13395 1621 aaKnown RBP34.53■■■■□ 3.12
CLPTM1-201ENST00000337392 CCNB3Q8WWL7 1395 aa34.52■■■■□ 3.12
CLPTM1-201ENST00000337392 RRBP1Q9P2E9 1410 aaKnown RBP34.51■■■■□ 3.12
CLPTM1-201ENST00000337392 CTTNBP2Q8WZ74 1663 aa34.48■■■■□ 3.11
CLPTM1-201ENST00000337392 PHLDB1Q86UU1 1377 aa34.47■■■■□ 3.11
CLPTM1-201ENST00000337392 LRRC9Q6ZRR7 1453 aa34.46■■■■□ 3.11
CLPTM1-201ENST00000337392 PELP1Q8IZL8 1130 aaKnown RBP34.46■■■■□ 3.11
CLPTM1-201ENST00000337392 FHAD1B1AJZ9 1412 aa34.45■■■■□ 3.1
CLPTM1-201ENST00000337392 MRC2Q9UBG0 1479 aa34.42■■■■□ 3.1
CLPTM1-201ENST00000337392 ZNF608Q9ULD9 1512 aaPredicted RBP34.41■■■■□ 3.1
CLPTM1-201ENST00000337392 FAM50AQ14320 339 aaKnown RBP34.41■■■■□ 3.1
CLPTM1-201ENST00000337392 DHX57Q6P158 1386 aaKnown RBP34.36■■■■□ 3.09
CLPTM1-201ENST00000337392 DIEXFQ68CQ4 756 aaKnown RBP34.35■■■■□ 3.09
CLPTM1-201ENST00000337392 ARID3CA6NKF2 412 aa34.33■■■■□ 3.09
CLPTM1-201ENST00000337392 EFCAB5A4FU69 1503 aa34.31■■■■□ 3.08
CLPTM1-201ENST00000337392 CASKIN1Q8WXD9 1431 aa34.28■■■■□ 3.08
CLPTM1-201ENST00000337392 PBRM1Q86U86 1689 aa34.27■■■■□ 3.08
CLPTM1-201ENST00000337392 MAP3K1Q13233 1512 aa34.26■■■■□ 3.07
CLPTM1-201ENST00000337392 CFAP43Q8NDM7 1665 aa34.25■■■■□ 3.07
CLPTM1-201ENST00000337392 FYCO1Q9BQS8 1478 aa34.25■■■■□ 3.07
CLPTM1-201ENST00000337392 ERCC6Q03468 1493 aa34.24■■■■□ 3.07
CLPTM1-201ENST00000337392 SNAPC4Q5SXM2 1469 aa34.23■■■■□ 3.07
CLPTM1-201ENST00000337392 ZNF316A6NFI3 1004 aaPredicted RBP34.21■■■■□ 3.07
CLPTM1-201ENST00000337392 FMN1Q68DA7 1419 aa34.2■■■■□ 3.07
CLPTM1-201ENST00000337392 SAMD9Q5K651 1589 aa34.18■■■■□ 3.06
CLPTM1-201ENST00000337392 RAB3GAP2Q9H2M9 1393 aa34.18■■■■□ 3.06
CLPTM1-201ENST00000337392 LRRIQ1Q96JM4 1722 aa34.15■■■■□ 3.06
CLPTM1-201ENST00000337392 ADAMTS12P58397 1594 aa34.13■■■■□ 3.05
CLPTM1-201ENST00000337392 GRIN2BQ13224 1484 aa34.13■■■■□ 3.05
CLPTM1-201ENST00000337392 WDR62O43379 1518 aa34.12■■■■□ 3.05
CLPTM1-201ENST00000337392 MTUS2Q5JR59 1369 aa34.11■■■■□ 3.05
CLPTM1-201ENST00000337392 IFT140Q96RY7 1462 aa34.08■■■■□ 3.05
CLPTM1-201ENST00000337392 FBLN2P98095 1184 aa34.06■■■■□ 3.04
CLPTM1-201ENST00000337392 IQGAP2Q13576 1575 aa34.01■■■■□ 3.04
CLPTM1-201ENST00000337392 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
CLPTM1-201ENST00000337392 SETD5Q9C0A6 1442 aa33.96■■■■□ 3.03
CLPTM1-201ENST00000337392 MAGI3Q5TCQ9 1506 aa33.95■■■■□ 3.03
CLPTM1-201ENST00000337392 FGD6Q6ZV73 1430 aa33.92■■■■□ 3.02
CLPTM1-201ENST00000337392 THOC2Q8NI27 1593 aaKnown RBP33.91■■■■□ 3.02
CLPTM1-201ENST00000337392 NCOA2Q15596 1464 aa33.9■■■■□ 3.02
CLPTM1-201ENST00000337392 CDK13Q14004 1512 aaKnown RBP33.9■■■■□ 3.02
CLPTM1-201ENST00000337392 SIN3AQ96ST3 1273 aa33.9■■■■□ 3.02
CLPTM1-201ENST00000337392 CLSPNQ9HAW4 1339 aa33.88■■■■□ 3.01
CLPTM1-201ENST00000337392 CHMP7Q8WUX9 453 aaPredicted RBP33.87■■■■□ 3.01
CLPTM1-201ENST00000337392 MAPKBP1O60336 1514 aa33.87■■■■□ 3.01
CLPTM1-201ENST00000337392 PTPRKQ15262 1439 aa33.87■■■■□ 3.01
CLPTM1-201ENST00000337392 NEUROD1Q13562 356 aa33.86■■■■□ 3.01
CLPTM1-201ENST00000337392 GRIN2AQ12879 1464 aa33.82■■■■□ 3.01
CLPTM1-201ENST00000337392 MIER1Q8N108 512 aa33.81■■■■□ 3
CLPTM1-201ENST00000337392 CHIC2Q9UKJ5 165 aa33.79■■■■□ 3
CLPTM1-201ENST00000337392 EPRSP07814 1512 aaKnown RBP33.77■■■■□ 3
CLPTM1-201ENST00000337392 DISP1Q96F81 1524 aa33.76■■■□□ 2.99
CLPTM1-201ENST00000337392 MYOM3Q5VTT5 1437 aa33.75■■■□□ 2.99
CLPTM1-201ENST00000337392 YTHDC1Q96MU7 727 aaKnown RBP33.75■■■□□ 2.99
CLPTM1-201ENST00000337392 KIAA0586Q9BVV6 1533 aa33.74■■■□□ 2.99
CLPTM1-201ENST00000337392 UGGT2Q9NYU1 1516 aa33.72■■■□□ 2.99
CLPTM1-201ENST00000337392 SUPT6HQ7KZ85 1726 aaKnown RBP33.71■■■□□ 2.99
CLPTM1-201ENST00000337392 EHBP1L1Q8N3D4 1523 aa33.71■■■□□ 2.99
CLPTM1-201ENST00000337392 SCAF1Q9H7N4 1312 aaKnown RBP33.7■■■□□ 2.99
CLPTM1-201ENST00000337392 HECW1Q76N89 1606 aa33.69■■■□□ 2.98
CLPTM1-201ENST00000337392 RRP7BPQ9NSQ0 103 aa33.69■■■□□ 2.98
CLPTM1-201ENST00000337392 CEP170Q5SW79 1584 aa33.67■■■□□ 2.98
CLPTM1-201ENST00000337392 KIAA0556O60303 1618 aa33.67■■■□□ 2.98
CLPTM1-201ENST00000337392 CCDC18Q5T9S5 1454 aa33.64■■■□□ 2.98
CLPTM1-201ENST00000337392 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.62■■■□□ 2.97
CLPTM1-201ENST00000337392 SYNJ2O15056 1496 aa33.61■■■□□ 2.97
CLPTM1-201ENST00000337392 PTPN23Q9H3S7 1636 aa33.6■■■□□ 2.97
CLPTM1-201ENST00000337392 MAGI1Q96QZ7 1491 aaPredicted RBP33.59■■■□□ 2.97
CLPTM1-201ENST00000337392 NUP153P49790 1475 aaKnown RBP33.57■■■□□ 2.96
CLPTM1-201ENST00000337392 ARHGEF11O15085 1522 aa33.57■■■□□ 2.96
CLPTM1-201ENST00000337392 PLB1Q6P1J6 1458 aa33.56■■■□□ 2.96
CLPTM1-201ENST00000337392 ZNF644Q9H582 1327 aaPredicted RBP33.56■■■□□ 2.96
CLPTM1-201ENST00000337392 JPH4Q96JJ6 628 aa33.56■■■□□ 2.96
CLPTM1-201ENST00000337392 NAIPQ13075 1403 aa33.53■■■□□ 2.96
CLPTM1-201ENST00000337392 HIRIP3Q9BW71 556 aaPredicted RBP33.52■■■□□ 2.96
CLPTM1-201ENST00000337392 HFM1A2PYH4 1435 aa33.5■■■□□ 2.95
CLPTM1-201ENST00000337392 ACIN1Q9UKV3 1341 aaKnown RBP33.5■■■□□ 2.95
CLPTM1-201ENST00000337392 PRG4Q92954 1404 aaPredicted RBP33.46■■■□□ 2.95
CLPTM1-201ENST00000337392 RAPGEF6Q8TEU7 1601 aa33.45■■■□□ 2.94
CLPTM1-201ENST00000337392 KDM6BO15054 1643 aa33.4■■■□□ 2.94
CLPTM1-201ENST00000337392 NUP160Q12769 1436 aa33.39■■■□□ 2.94
CLPTM1-201ENST00000337392 TRIM52Q96A61 297 aa33.39■■■□□ 2.94
CLPTM1-201ENST00000337392 ZNF777Q9ULD5 760 aaPredicted RBP33.36■■■□□ 2.93
CLPTM1-201ENST00000337392 FOXD1Q16676 465 aa33.35■■■□□ 2.93
CLPTM1-201ENST00000337392 TCOF1Q13428 1488 aaKnown RBP33.34■■■□□ 2.93
CLPTM1-201ENST00000337392 UACAQ9BZF9 1416 aa33.34■■■□□ 2.93
CLPTM1-201ENST00000337392 MYT1Q01538 1121 aa33.31■■■□□ 2.92
CLPTM1-201ENST00000337392 CENPBP07199 599 aaPredicted RBP33.29■■■□□ 2.92
CLPTM1-201ENST00000337392 CDK11AQ9UQ88 783 aaPredicted RBP33.28■■■□□ 2.92
CLPTM1-201ENST00000337392 CARMIL2Q6F5E8 1435 aa33.28■■■□□ 2.92
CLPTM1-201ENST00000337392 PPP1R15AO75807 674 aaPredicted RBP33.26■■■□□ 2.91
CLPTM1-201ENST00000337392 MIA2Q96PC5 1412 aa33.25■■■□□ 2.91
CLPTM1-201ENST00000337392 KIF14Q15058 1648 aa33.25■■■□□ 2.91
CLPTM1-201ENST00000337392 GTF3C3Q9Y5Q9 886 aa33.23■■■□□ 2.91
CLPTM1-201ENST00000337392 CFDP1Q9UEE9 299 aaPredicted RBP33.22■■■□□ 2.91
CLPTM1-201ENST00000337392 TONSLQ96HA7 1378 aa33.22■■■□□ 2.91
CLPTM1-201ENST00000337392 DENND4BO75064 1496 aaPredicted RBP33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms