RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 SNAPC4Q5SXM2 1469 aa40.73■■■■■ 4.11
ATF4-201ENST00000337304 TRIM26Q12899 539 aaPredicted RBP40.72■■■■■ 4.11
ATF4-201ENST00000337304 PPARGC1BQ86YN6 1023 aaKnown RBP40.7■■■■■ 4.11
ATF4-201ENST00000337304 MAGI1Q96QZ7 1491 aaPredicted RBP40.63■■■■■ 4.1
ATF4-201ENST00000337304 EFCAB5A4FU69 1503 aa40.57■■■■■ 4.08
ATF4-201ENST00000337304 GRIN2AQ12879 1464 aa40.51■■■■■ 4.08
ATF4-201ENST00000337304 SYNJ2O15056 1496 aa40.49■■■■■ 4.07
ATF4-201ENST00000337304 SAMD9Q5K651 1589 aa40.44■■■■■ 4.06
ATF4-201ENST00000337304 IQGAP2Q13576 1575 aa40.43■■■■■ 4.06
ATF4-201ENST00000337304 P3H3Q8IVL6 736 aa40.4■■■■■ 4.06
ATF4-201ENST00000337304 APLP2Q06481 763 aa40.4■■■■■ 4.06
ATF4-201ENST00000337304 FHOD3Q2V2M9 1422 aa40.39■■■■■ 4.06
ATF4-201ENST00000337304 CHMP7Q8WUX9 453 aaPredicted RBP40.37■■■■■ 4.05
ATF4-201ENST00000337304 TTBK1Q5TCY1 1321 aaPredicted RBP40.36■■■■■ 4.05
ATF4-201ENST00000337304 KIAA0586Q9BVV6 1533 aa40.32■■■■■ 4.05
ATF4-201ENST00000337304 CEP170Q5SW79 1584 aa40.28■■■■■ 4.04
ATF4-201ENST00000337304 FBLN2P98095 1184 aa40.26■■■■■ 4.04
ATF4-201ENST00000337304 UGGT2Q9NYU1 1516 aa40.24■■■■■ 4.03
ATF4-201ENST00000337304 PCF11O94913 1555 aaKnown RBP40.24■■■■■ 4.03
ATF4-201ENST00000337304 NUP160Q12769 1436 aa40.21■■■■■ 4.03
ATF4-201ENST00000337304 FMN1Q68DA7 1419 aa40.18■■■■■ 4.02
ATF4-201ENST00000337304 MAP3K1Q13233 1512 aa40.13■■■■■ 4.01
ATF4-201ENST00000337304 FYCO1Q9BQS8 1478 aa40.13■■■■■ 4.01
ATF4-201ENST00000337304 CASKIN1Q8WXD9 1431 aa40.13■■■■■ 4.01
ATF4-201ENST00000337304 KANK4Q5T7N3 995 aaPredicted RBP40.1■■■■■ 4.01
ATF4-201ENST00000337304 TIAM1Q13009 1591 aa40.1■■■■■ 4.01
ATF4-201ENST00000337304 CHD1O14646 1710 aa40.09■■■■■ 4.01
ATF4-201ENST00000337304 DISP1Q96F81 1524 aa40.04■■■■■ 4
ATF4-201ENST00000337304 KIAA0556O60303 1618 aa40.04■■■■■ 4
ATF4-201ENST00000337304 CFAP43Q8NDM7 1665 aa40.03■■■■■ 4
ATF4-201ENST00000337304 ATP1B4Q9UN42 357 aaPredicted RBP39.96■■■■□ 3.99
ATF4-201ENST00000337304 LRRC9Q6ZRR7 1453 aa39.9■■■■□ 3.98
ATF4-201ENST00000337304 LRRIQ1Q96JM4 1722 aa39.9■■■■□ 3.98
ATF4-201ENST00000337304 JPH4Q96JJ6 628 aa39.89■■■■□ 3.98
ATF4-201ENST00000337304 CARMIL2Q6F5E8 1435 aa39.8■■■■□ 3.96
ATF4-201ENST00000337304 HECW1Q76N89 1606 aa39.79■■■■□ 3.96
ATF4-201ENST00000337304 CCDC18Q5T9S5 1454 aa39.7■■■■□ 3.95
ATF4-201ENST00000337304 SHROOM2Q13796 1616 aa39.67■■■■□ 3.94
ATF4-201ENST00000337304 RAPGEF6Q8TEU7 1601 aa39.65■■■■□ 3.94
ATF4-201ENST00000337304 RRBP1Q9P2E9 1410 aaKnown RBP39.65■■■■□ 3.94
ATF4-201ENST00000337304 EPRSP07814 1512 aaKnown RBP39.64■■■■□ 3.94
ATF4-201ENST00000337304 PRG4Q92954 1404 aaPredicted RBP39.64■■■■□ 3.94
ATF4-201ENST00000337304 HRCP23327 699 aa39.6■■■■□ 3.93
ATF4-201ENST00000337304 CLASP1Q7Z460 1538 aa39.6■■■■□ 3.93
ATF4-201ENST00000337304 MTUS2Q5JR59 1369 aa39.58■■■■□ 3.93
ATF4-201ENST00000337304 CDK13Q14004 1512 aaKnown RBP39.56■■■■□ 3.92
ATF4-201ENST00000337304 NUP153P49790 1475 aaKnown RBP39.56■■■■□ 3.92
ATF4-201ENST00000337304 PHLDB1Q86UU1 1377 aa39.55■■■■□ 3.92
ATF4-201ENST00000337304 EHBP1L1Q8N3D4 1523 aa39.53■■■■□ 3.92
ATF4-201ENST00000337304 PLB1Q6P1J6 1458 aa39.53■■■■□ 3.92
ATF4-201ENST00000337304 MAGI3Q5TCQ9 1506 aa39.52■■■■□ 3.92
ATF4-201ENST00000337304 CCNB3Q8WWL7 1395 aa39.5■■■■□ 3.91
ATF4-201ENST00000337304 HNRNPUL2Q1KMD3 747 aaKnown RBP39.47■■■■□ 3.91
ATF4-201ENST00000337304 ABCA8O94911 1581 aa39.45■■■■□ 3.91
ATF4-201ENST00000337304 SUPT6HQ7KZ85 1726 aaKnown RBP39.45■■■■□ 3.91
ATF4-201ENST00000337304 ARID3CA6NKF2 412 aa39.43■■■■□ 3.9
ATF4-201ENST00000337304 ERCC6L2Q5T890 1561 aa39.4■■■■□ 3.9
ATF4-201ENST00000337304 PTPRGP23470 1445 aa39.4■■■■□ 3.9
ATF4-201ENST00000337304 NCOA2Q15596 1464 aa39.39■■■■□ 3.9
ATF4-201ENST00000337304 ARHGEF11O15085 1522 aa39.34■■■■□ 3.89
ATF4-201ENST00000337304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.25■■■■□ 3.87
ATF4-201ENST00000337304 FGD6Q6ZV73 1430 aa39.25■■■■□ 3.87
ATF4-201ENST00000337304 MYOM3Q5VTT5 1437 aa39.24■■■■□ 3.87
ATF4-201ENST00000337304 CDK11AQ9UQ88 783 aaPredicted RBP39.23■■■■□ 3.87
ATF4-201ENST00000337304 ATP10BO94823 1461 aa39.19■■■■□ 3.86
ATF4-201ENST00000337304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.19■■■■□ 3.863e-9■□□□□ 11.2
ATF4-201ENST00000337304 UACAQ9BZF9 1416 aa39.18■■■■□ 3.86
ATF4-201ENST00000337304 FAM50AQ14320 339 aaKnown RBP39.18■■■■□ 3.86
ATF4-201ENST00000337304 TROQ12816 1431 aaPredicted RBP39.15■■■■□ 3.86
ATF4-201ENST00000337304 OSCARQ8IYS5 282 aa39.13■■■■□ 3.85
ATF4-201ENST00000337304 ITGAEP38570 1179 aa39.12■■■■□ 3.85
ATF4-201ENST00000337304 CCER1Q8TC90 406 aaPredicted RBP39.1■■■■□ 3.85
ATF4-201ENST00000337304 ADCY10Q96PN6 1610 aa39.08■■■■□ 3.85
ATF4-201ENST00000337304 ABCC2Q92887 1545 aa39.08■■■■□ 3.85
ATF4-201ENST00000337304 ZEB1P37275 1124 aaPredicted RBP39.07■■■■□ 3.84
ATF4-201ENST00000337304 PTPN23Q9H3S7 1636 aa39.07■■■■□ 3.84
ATF4-201ENST00000337304 KIF14Q15058 1648 aa39.01■■■■□ 3.84
ATF4-201ENST00000337304 MIA2Q96PC5 1412 aa39■■■■□ 3.83
ATF4-201ENST00000337304 PLEKHD1A6NEE1 506 aa39■■■■□ 3.83
ATF4-201ENST00000337304 TCOF1Q13428 1488 aaKnown RBP38.99■■■■□ 3.83
ATF4-201ENST00000337304 UHRF1BP1LA0JNW5 1464 aa38.95■■■■□ 3.83
ATF4-201ENST00000337304 ITSN2Q9NZM3 1697 aa38.88■■■■□ 3.82
ATF4-201ENST00000337304 ABCC10Q5T3U5 1492 aa38.84■■■■□ 3.81
ATF4-201ENST00000337304 ZCCHC11Q5TAX3 1644 aaKnown RBP38.83■■■■□ 3.81
ATF4-201ENST00000337304 GPATCH8Q9UKJ3 1502 aaKnown RBP38.83■■■■□ 3.81
ATF4-201ENST00000337304 PTPRKQ15262 1439 aa38.83■■■■□ 3.81
ATF4-201ENST00000337304 KDM5BQ9UGL1 1544 aa38.82■■■■□ 3.8
ATF4-201ENST00000337304 SETD5Q9C0A6 1442 aa38.81■■■■□ 3.8
ATF4-201ENST00000337304 CDC42BPAQ5VT25 1732 aa38.78■■■■□ 3.8
ATF4-201ENST00000337304 RAB3GAP2Q9H2M9 1393 aa38.78■■■■□ 3.8
ATF4-201ENST00000337304 CFDP1Q9UEE9 299 aaPredicted RBP38.71■■■■□ 3.79
ATF4-201ENST00000337304 DHX57Q6P158 1386 aaKnown RBP38.7■■■■□ 3.79
ATF4-201ENST00000337304 ZNF644Q9H582 1327 aaPredicted RBP38.69■■■■□ 3.78
ATF4-201ENST00000337304 CAMSAP2Q08AD1 1489 aa38.67■■■■□ 3.78
ATF4-201ENST00000337304 DNMT1P26358 1616 aaKnown RBP38.66■■■■□ 3.78
ATF4-201ENST00000337304 HFM1A2PYH4 1435 aa38.65■■■■□ 3.78
ATF4-201ENST00000337304 DAPK1P53355 1430 aa38.61■■■■□ 3.77
ATF4-201ENST00000337304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.61■■■■□ 3.773e-8■■□□□ 13.3
ATF4-201ENST00000337304 TTC37Q6PGP7 1564 aa38.59■■■■□ 3.77
ATF4-201ENST00000337304 PREX2Q70Z35 1606 aa38.59■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms