RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
COL2A1-201ENST00000337299 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
COL2A1-201ENST00000337299 TMC1Q8TDI8 760 aa17.77■□□□□ 0.43
COL2A1-201ENST00000337299 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
COL2A1-201ENST00000337299 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
COL2A1-201ENST00000337299 ZNF777Q9ULD5 760 aaPredicted RBP17.74■□□□□ 0.43
COL2A1-201ENST00000337299 BAZ1AQ9NRL2 1556 aaPredicted RBP17.73■□□□□ 0.43
COL2A1-201ENST00000337299 PPM1GO15355 546 aaPredicted RBP17.73■□□□□ 0.43
COL2A1-201ENST00000337299 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
COL2A1-201ENST00000337299 CANXP27824 592 aaKnown RBP17.71■□□□□ 0.43
COL2A1-201ENST00000337299 NAP1L5Q96NT1 182 aaPredicted RBP17.7■□□□□ 0.42
COL2A1-201ENST00000337299 SOGA1O94964 1423 aa17.69■□□□□ 0.42
COL2A1-201ENST00000337299 CHIC2Q9UKJ5 165 aa17.69■□□□□ 0.42
COL2A1-201ENST00000337299 ERICH6BQ5W0A0 696 aa17.68■□□□□ 0.42
COL2A1-201ENST00000337299 FANCIQ9NVI1 1328 aa17.68■□□□□ 0.42
COL2A1-201ENST00000337299 CCER2I3L3R5 266 aa17.68■□□□□ 0.42
COL2A1-201ENST00000337299 GOLGA3Q08378 1498 aa17.66■□□□□ 0.42
COL2A1-201ENST00000337299 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.42
COL2A1-201ENST00000337299 ARID4BQ4LE39 1312 aaPredicted RBP17.65■□□□□ 0.42
COL2A1-201ENST00000337299 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
COL2A1-201ENST00000337299 MSH5O43196 834 aa17.64■□□□□ 0.41
COL2A1-201ENST00000337299 IL27Q8NEV9 243 aa17.63■□□□□ 0.41
COL2A1-201ENST00000337299 IPO9Q96P70 1041 aaKnown RBP17.63■□□□□ 0.41
COL2A1-201ENST00000337299 DDRGK1Q96HY6 314 aa17.63■□□□□ 0.41
COL2A1-201ENST00000337299 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
COL2A1-201ENST00000337299 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
COL2A1-201ENST00000337299 TIMELESSQ9UNS1 1208 aa17.57■□□□□ 0.4
COL2A1-201ENST00000337299 WIZO95785 1651 aa17.55■□□□□ 0.4
COL2A1-201ENST00000337299 RGS3P49796 1198 aa17.54■□□□□ 0.4
COL2A1-201ENST00000337299 UPF2Q9HAU5 1272 aaKnown RBP17.54■□□□□ 0.4
COL2A1-201ENST00000337299 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
COL2A1-201ENST00000337299 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
COL2A1-201ENST00000337299 HSP90AA1P07900 732 aaKnown RBP17.53■□□□□ 0.4
COL2A1-201ENST00000337299 ANP32BQ92688 251 aaKnown RBP17.53■□□□□ 0.4
COL2A1-201ENST00000337299 RRP7BPQ9NSQ0 103 aa17.52■□□□□ 0.39
COL2A1-201ENST00000337299 DHX57Q6P158 1386 aaKnown RBP17.51■□□□□ 0.39
COL2A1-201ENST00000337299 EEA1Q15075 1411 aa17.48■□□□□ 0.39
COL2A1-201ENST00000337299 CCNB3Q8WWL7 1395 aa17.48■□□□□ 0.39
COL2A1-201ENST00000337299 TRIM44Q96DX7 344 aaPredicted RBP17.48■□□□□ 0.39
COL2A1-201ENST00000337299 SLC4A3P48751 1232 aa17.46■□□□□ 0.39
COL2A1-201ENST00000337299 KIF27Q86VH2 1401 aa17.46■□□□□ 0.39
COL2A1-201ENST00000337299 VSIG10Q8N0Z9 540 aa17.46■□□□□ 0.39
COL2A1-201ENST00000337299 KDM2AQ9Y2K7 1162 aa17.44■□□□□ 0.38
COL2A1-201ENST00000337299 MTUS2Q5JR59 1369 aa17.43■□□□□ 0.38
COL2A1-201ENST00000337299 RAB3GAP2Q9H2M9 1393 aa17.42■□□□□ 0.38
COL2A1-201ENST00000337299 VPS8Q8N3P4 1428 aa17.42■□□□□ 0.38
COL2A1-201ENST00000337299 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
COL2A1-201ENST00000337299 CEP164Q9UPV0 1460 aa17.4■□□□□ 0.38
COL2A1-201ENST00000337299 BECN1Q14457 450 aa17.4■□□□□ 0.38
COL2A1-201ENST00000337299 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.4■□□□□ 0.38
COL2A1-201ENST00000337299 PPP1R15AO75807 674 aaPredicted RBP17.39■□□□□ 0.38
COL2A1-201ENST00000337299 BRPF3Q9ULD4 1205 aa17.39■□□□□ 0.38
COL2A1-201ENST00000337299 SPRYD3Q8NCJ5 442 aa17.37■□□□□ 0.37
COL2A1-201ENST00000337299 GZF1Q9H116 711 aaPredicted RBP17.37■□□□□ 0.37
COL2A1-201ENST00000337299 ARID3AQ99856 593 aa17.36■□□□□ 0.37
COL2A1-201ENST00000337299 GSE1Q14687 1217 aa17.36■□□□□ 0.37
COL2A1-201ENST00000337299 SLKQ9H2G2 1235 aaPredicted RBP17.36■□□□□ 0.37
COL2A1-201ENST00000337299 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
COL2A1-201ENST00000337299 CUX2O14529 1486 aa17.34■□□□□ 0.37
COL2A1-201ENST00000337299 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
COL2A1-201ENST00000337299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.33■□□□□ 0.363e-6■□□□□ 11.3
COL2A1-201ENST00000337299 CARMIL1Q5VZK9 1371 aa17.33■□□□□ 0.36
COL2A1-201ENST00000337299 TCERG1O14776 1098 aaKnown RBP17.32■□□□□ 0.36
COL2A1-201ENST00000337299 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
COL2A1-201ENST00000337299 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
COL2A1-201ENST00000337299 PDE4AP27815 886 aa17.3■□□□□ 0.36
COL2A1-201ENST00000337299 WDR43Q15061 677 aaKnown RBP eCLIP17.3■□□□□ 0.36
COL2A1-201ENST00000337299 SETD5Q9C0A6 1442 aa17.3■□□□□ 0.36
COL2A1-201ENST00000337299 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
COL2A1-201ENST00000337299 RSPH6AQ9H0K4 717 aa17.28■□□□□ 0.36
COL2A1-201ENST00000337299 NUDCQ9Y266 331 aa17.28■□□□□ 0.36
COL2A1-201ENST00000337299 HSP90AA2PQ14568 343 aaPredicted RBP17.27■□□□□ 0.35
COL2A1-201ENST00000337299 TOP2AP11388 1531 aaKnown RBP17.26■□□□□ 0.35
COL2A1-201ENST00000337299 NCLP19338 710 aaKnown RBP17.25■□□□□ 0.35
COL2A1-201ENST00000337299 RCAN3Q9UKA8 241 aa17.25■□□□□ 0.35
COL2A1-201ENST00000337299 FOXD1Q16676 465 aa17.24■□□□□ 0.35
COL2A1-201ENST00000337299 PKNOX2Q96KN3 472 aa17.24■□□□□ 0.35
COL2A1-201ENST00000337299 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
COL2A1-201ENST00000337299 TSPY4P0CV99 314 aa17.24■□□□□ 0.35
COL2A1-201ENST00000337299 TSPY10P0CW01 314 aa17.24■□□□□ 0.35
COL2A1-201ENST00000337299 EXOC6Q8TAG9 804 aa17.23■□□□□ 0.35
COL2A1-201ENST00000337299 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
COL2A1-201ENST00000337299 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.35
COL2A1-201ENST00000337299 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
COL2A1-201ENST00000337299 CHGAP10645 457 aaKnown RBP17.2■□□□□ 0.34
COL2A1-201ENST00000337299 ZBTB7CA1YPR0 619 aa17.19■□□□□ 0.34
COL2A1-201ENST00000337299 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
COL2A1-201ENST00000337299 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
COL2A1-201ENST00000337299 FRAT1Q92837 279 aaPredicted RBP17.18■□□□□ 0.34
COL2A1-201ENST00000337299 PLIN1O60240 522 aa17.18■□□□□ 0.34
COL2A1-201ENST00000337299 SENP3Q9H4L4 574 aaPredicted RBP17.18■□□□□ 0.34
COL2A1-201ENST00000337299 NFKBIBQ15653 356 aa17.17■□□□□ 0.34
COL2A1-201ENST00000337299 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
COL2A1-201ENST00000337299 CC2D1BQ5T0F9 858 aaKnown RBP17.17■□□□□ 0.34
COL2A1-201ENST00000337299 PRKRIP1Q9H875 184 aaPredicted RBP17.17■□□□□ 0.34
COL2A1-201ENST00000337299 DNTTIP2Q5QJE6 756 aaKnown RBP17.16■□□□□ 0.34
COL2A1-201ENST00000337299 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
COL2A1-201ENST00000337299 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
COL2A1-201ENST00000337299 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-201ENST00000337299 ZBED9Q6R2W3 1325 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms