RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 FHAD1B1AJZ9 1412 aa25.15■■□□□ 1.62
TMEM39B-201ENST00000336294 MRC2Q9UBG0 1479 aa25.15■■□□□ 1.62
TMEM39B-201ENST00000336294 TIAM1Q13009 1591 aa25.12■■□□□ 1.61
TMEM39B-201ENST00000336294 RRBP1Q9P2E9 1410 aaKnown RBP25.08■■□□□ 1.61
TMEM39B-201ENST00000336294 PCF11O94913 1555 aaKnown RBP25.04■■□□□ 1.6
TMEM39B-201ENST00000336294 FHOD3Q2V2M9 1422 aa25.02■■□□□ 1.6
TMEM39B-201ENST00000336294 PBRM1Q86U86 1689 aa25.02■■□□□ 1.6
TMEM39B-201ENST00000336294 CFAP43Q8NDM7 1665 aa25.02■■□□□ 1.6
TMEM39B-201ENST00000336294 AQRO60306 1485 aaKnown RBP eCLIP25■■□□□ 1.593e-6■■■□□ 18.4
TMEM39B-201ENST00000336294 P3H3Q8IVL6 736 aa25■■□□□ 1.59
TMEM39B-201ENST00000336294 FYCO1Q9BQS8 1478 aa25■■□□□ 1.59
TMEM39B-201ENST00000336294 LRRC9Q6ZRR7 1453 aa24.99■■□□□ 1.59
TMEM39B-201ENST00000336294 WDR62O43379 1518 aa24.98■■□□□ 1.59
TMEM39B-201ENST00000336294 CCNB3Q8WWL7 1395 aa24.97■■□□□ 1.59
TMEM39B-201ENST00000336294 CASKIN1Q8WXD9 1431 aa24.97■■□□□ 1.59
TMEM39B-201ENST00000336294 SAMD9Q5K651 1589 aa24.96■■□□□ 1.59
TMEM39B-201ENST00000336294 FMN1Q68DA7 1419 aa24.95■■□□□ 1.58
TMEM39B-201ENST00000336294 IFT140Q96RY7 1462 aa24.94■■□□□ 1.58
TMEM39B-201ENST00000336294 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
TMEM39B-201ENST00000336294 GRIN2BQ13224 1484 aa24.9■■□□□ 1.58
TMEM39B-201ENST00000336294 ERCC6Q03468 1493 aa24.88■■□□□ 1.57
TMEM39B-201ENST00000336294 ATP1B4Q9UN42 357 aaPredicted RBP24.86■■□□□ 1.57
TMEM39B-201ENST00000336294 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
TMEM39B-201ENST00000336294 ZNF608Q9ULD9 1512 aaPredicted RBP24.8■■□□□ 1.56
TMEM39B-201ENST00000336294 PHLDB1Q86UU1 1377 aa24.8■■□□□ 1.56
TMEM39B-201ENST00000336294 IQGAP2Q13576 1575 aa24.79■■□□□ 1.56
TMEM39B-201ENST00000336294 CLSPNQ9HAW4 1339 aa24.79■■□□□ 1.56
TMEM39B-201ENST00000336294 THOC2Q8NI27 1593 aaKnown RBP24.78■■□□□ 1.56
TMEM39B-201ENST00000336294 DHX57Q6P158 1386 aaKnown RBP24.75■■□□□ 1.55
TMEM39B-201ENST00000336294 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
TMEM39B-201ENST00000336294 ITGAEP38570 1179 aa24.69■■□□□ 1.54
TMEM39B-201ENST00000336294 LRRIQ1Q96JM4 1722 aa24.68■■□□□ 1.54
TMEM39B-201ENST00000336294 MTUS2Q5JR59 1369 aa24.66■■□□□ 1.54
TMEM39B-201ENST00000336294 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.66■■□□□ 1.54
TMEM39B-201ENST00000336294 UGGT2Q9NYU1 1516 aa24.66■■□□□ 1.54
TMEM39B-201ENST00000336294 FAM50AQ14320 339 aaKnown RBP24.64■■□□□ 1.54
TMEM39B-201ENST00000336294 CCDC18Q5T9S5 1454 aa24.63■■□□□ 1.53
TMEM39B-201ENST00000336294 HECW1Q76N89 1606 aa24.62■■□□□ 1.53
TMEM39B-201ENST00000336294 KIAA0586Q9BVV6 1533 aa24.62■■□□□ 1.53
TMEM39B-201ENST00000336294 GRIN2AQ12879 1464 aa24.62■■□□□ 1.53
TMEM39B-201ENST00000336294 EHBP1L1Q8N3D4 1523 aa24.61■■□□□ 1.53
TMEM39B-201ENST00000336294 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
TMEM39B-201ENST00000336294 ZNF316A6NFI3 1004 aaPredicted RBP24.61■■□□□ 1.53
TMEM39B-201ENST00000336294 RAB3GAP2Q9H2M9 1393 aa24.6■■□□□ 1.53
TMEM39B-201ENST00000336294 SETD5Q9C0A6 1442 aa24.6■■□□□ 1.53
TMEM39B-201ENST00000336294 FGD6Q6ZV73 1430 aa24.58■■□□□ 1.53
TMEM39B-201ENST00000336294 SUPT6HQ7KZ85 1726 aaKnown RBP24.57■■□□□ 1.52
TMEM39B-201ENST00000336294 DIEXFQ68CQ4 756 aaKnown RBP24.57■■□□□ 1.52
TMEM39B-201ENST00000336294 NCOA2Q15596 1464 aa24.55■■□□□ 1.52
TMEM39B-201ENST00000336294 KIAA0556O60303 1618 aa24.52■■□□□ 1.52
TMEM39B-201ENST00000336294 SYNJ2O15056 1496 aa24.52■■□□□ 1.52
TMEM39B-201ENST00000336294 MYOM3Q5VTT5 1437 aa24.51■■□□□ 1.51
TMEM39B-201ENST00000336294 EPRSP07814 1512 aaKnown RBP24.5■■□□□ 1.51
TMEM39B-201ENST00000336294 DISP1Q96F81 1524 aa24.49■■□□□ 1.51
TMEM39B-201ENST00000336294 ARHGEF11O15085 1522 aa24.49■■□□□ 1.51
TMEM39B-201ENST00000336294 MAGI3Q5TCQ9 1506 aa24.48■■□□□ 1.51
TMEM39B-201ENST00000336294 DNAJC5Q9H3Z4 198 aa24.47■■□□□ 1.51
TMEM39B-201ENST00000336294 CHMP7Q8WUX9 453 aaPredicted RBP24.46■■□□□ 1.51
TMEM39B-201ENST00000336294 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
TMEM39B-201ENST00000336294 MAPKBP1O60336 1514 aa24.43■■□□□ 1.5
TMEM39B-201ENST00000336294 CDK13Q14004 1512 aaKnown RBP24.42■■□□□ 1.5
TMEM39B-201ENST00000336294 PTPN23Q9H3S7 1636 aa24.4■■□□□ 1.5
TMEM39B-201ENST00000336294 NUP160Q12769 1436 aa24.38■■□□□ 1.49
TMEM39B-201ENST00000336294 RAPGEF6Q8TEU7 1601 aa24.38■■□□□ 1.49
TMEM39B-201ENST00000336294 TCOF1Q13428 1488 aaKnown RBP24.35■■□□□ 1.49
TMEM39B-201ENST00000336294 FBLN2P98095 1184 aa24.34■■□□□ 1.49
TMEM39B-201ENST00000336294 HFM1A2PYH4 1435 aa24.33■■□□□ 1.49
TMEM39B-201ENST00000336294 NUP153P49790 1475 aaKnown RBP24.33■■□□□ 1.48
TMEM39B-201ENST00000336294 PTPRKQ15262 1439 aa24.32■■□□□ 1.48
TMEM39B-201ENST00000336294 CARMIL2Q6F5E8 1435 aa24.3■■□□□ 1.48
TMEM39B-201ENST00000336294 MIA2Q96PC5 1412 aa24.3■■□□□ 1.48
TMEM39B-201ENST00000336294 ARID3CA6NKF2 412 aa24.26■■□□□ 1.47
TMEM39B-201ENST00000336294 JPH4Q96JJ6 628 aa24.25■■□□□ 1.47
TMEM39B-201ENST00000336294 CDK11AQ9UQ88 783 aaPredicted RBP24.24■■□□□ 1.47
TMEM39B-201ENST00000336294 NAIPQ13075 1403 aa24.24■■□□□ 1.47
TMEM39B-201ENST00000336294 UACAQ9BZF9 1416 aa24.21■■□□□ 1.47
TMEM39B-201ENST00000336294 PLB1Q6P1J6 1458 aa24.19■■□□□ 1.46
TMEM39B-201ENST00000336294 AKNAQ7Z591 1439 aa24.19■■□□□ 1.46
TMEM39B-201ENST00000336294 TIMELESSQ9UNS1 1208 aa24.18■■□□□ 1.46
TMEM39B-201ENST00000336294 GCC2Q8IWJ2 1684 aa24.18■■□□□ 1.46
TMEM39B-201ENST00000336294 TROQ12816 1431 aaPredicted RBP24.16■■□□□ 1.46
TMEM39B-201ENST00000336294 SCAF1Q9H7N4 1312 aaKnown RBP24.15■■□□□ 1.46
TMEM39B-201ENST00000336294 SIN3AQ96ST3 1273 aa24.14■■□□□ 1.45
TMEM39B-201ENST00000336294 NEUROD1Q13562 356 aa24.12■■□□□ 1.45
TMEM39B-201ENST00000336294 ACIN1Q9UKV3 1341 aaKnown RBP24.11■■□□□ 1.45
TMEM39B-201ENST00000336294 ADCY10Q96PN6 1610 aa24.11■■□□□ 1.45
TMEM39B-201ENST00000336294 ABCA8O94911 1581 aa24.11■■□□□ 1.45
TMEM39B-201ENST00000336294 CENPBP07199 599 aaPredicted RBP24.11■■□□□ 1.45
TMEM39B-201ENST00000336294 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
TMEM39B-201ENST00000336294 DNMT1P26358 1616 aaKnown RBP24.08■■□□□ 1.45
TMEM39B-201ENST00000336294 ITSN2Q9NZM3 1697 aa24.08■■□□□ 1.45
TMEM39B-201ENST00000336294 RRP7BPQ9NSQ0 103 aa24.07■■□□□ 1.44
TMEM39B-201ENST00000336294 CHIC2Q9UKJ5 165 aa24.07■■□□□ 1.44
TMEM39B-201ENST00000336294 CHD1O14646 1710 aa24.07■■□□□ 1.44
TMEM39B-201ENST00000336294 DAPK1P53355 1430 aa24.07■■□□□ 1.44
TMEM39B-201ENST00000336294 MIER1Q8N108 512 aa24.06■■□□□ 1.44
TMEM39B-201ENST00000336294 ROCK1Q13464 1354 aa24.05■■□□□ 1.44
TMEM39B-201ENST00000336294 KIF14Q15058 1648 aa24.02■■□□□ 1.44
TMEM39B-201ENST00000336294 ABCC5O15440 1437 aa24.02■■□□□ 1.44
TMEM39B-201ENST00000336294 GPATCH8Q9UKJ3 1502 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms