RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 ERICH3Q5RHP9 1530 aa19.53■□□□□ 0.72
C9orf85-201ENST00000334731 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
C9orf85-201ENST00000334731 NUP160Q12769 1436 aa19.5■□□□□ 0.71
C9orf85-201ENST00000334731 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
C9orf85-201ENST00000334731 IGF1RP08069 1367 aa19.43■□□□□ 0.7
C9orf85-201ENST00000334731 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
C9orf85-201ENST00000334731 ERCC6L2Q5T890 1561 aa19.37■□□□□ 0.69
C9orf85-201ENST00000334731 TRHP20396 242 aaPredicted RBP19.37■□□□□ 0.69
C9orf85-201ENST00000334731 JPH4Q96JJ6 628 aa19.36■□□□□ 0.69
C9orf85-201ENST00000334731 SHROOM2Q13796 1616 aa19.33■□□□□ 0.68
C9orf85-201ENST00000334731 PRG4Q92954 1404 aaPredicted RBP19.3■□□□□ 0.68
C9orf85-201ENST00000334731 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
C9orf85-201ENST00000334731 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
C9orf85-201ENST00000334731 CUL7Q14999 1698 aa19.24■□□□□ 0.67
C9orf85-201ENST00000334731 RUSC2Q8N2Y8 1516 aa19.24■□□□□ 0.67
C9orf85-201ENST00000334731 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
C9orf85-201ENST00000334731 NPM1P06748 294 aaKnown RBP eCLIP19.06■□□□□ 0.64
C9orf85-201ENST00000334731 PTPRGP23470 1445 aa19.05■□□□□ 0.64
C9orf85-201ENST00000334731 CARMIL2Q6F5E8 1435 aa19.04■□□□□ 0.64
C9orf85-201ENST00000334731 IQGAP2Q13576 1575 aa19.02■□□□□ 0.64
C9orf85-201ENST00000334731 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.64
C9orf85-201ENST00000334731 TTBK1Q5TCY1 1321 aaPredicted RBP19.01■□□□□ 0.63
C9orf85-201ENST00000334731 ADCY10Q96PN6 1610 aa18.99■□□□□ 0.63
C9orf85-201ENST00000334731 DISP1Q96F81 1524 aa18.97■□□□□ 0.63
C9orf85-201ENST00000334731 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
C9orf85-201ENST00000334731 UGGT2Q9NYU1 1516 aa18.95■□□□□ 0.62
C9orf85-201ENST00000334731 FAM69CQ0P6D2 419 aa18.95■□□□□ 0.62
C9orf85-201ENST00000334731 MAPKBP1O60336 1514 aa18.94■□□□□ 0.62
C9orf85-201ENST00000334731 ABCC10Q5T3U5 1492 aa18.93■□□□□ 0.62
C9orf85-201ENST00000334731 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
C9orf85-201ENST00000334731 UACAQ9BZF9 1416 aa18.89■□□□□ 0.61
C9orf85-201ENST00000334731 UHRF1BP1LA0JNW5 1464 aa18.88■□□□□ 0.61
C9orf85-201ENST00000334731 ABCC2Q92887 1545 aa18.88■□□□□ 0.61
C9orf85-201ENST00000334731 KIF13AQ9H1H9 1805 aa18.86■□□□□ 0.61
C9orf85-201ENST00000334731 KIAA0556O60303 1618 aa18.85■□□□□ 0.61
C9orf85-201ENST00000334731 DIP2BQ9P265 1576 aa18.83■□□□□ 0.6
C9orf85-201ENST00000334731 GOLGA3Q08378 1498 aa18.82■□□□□ 0.6
C9orf85-201ENST00000334731 EEA1Q15075 1411 aa18.81■□□□□ 0.6
C9orf85-201ENST00000334731 ASXL2Q76L83 1435 aa18.81■□□□□ 0.6
C9orf85-201ENST00000334731 CTTNBP2Q8WZ74 1663 aa18.8■□□□□ 0.6
C9orf85-201ENST00000334731 PLB1Q6P1J6 1458 aa18.79■□□□□ 0.6
C9orf85-201ENST00000334731 FAM9AQ8IZU1 332 aaPredicted RBP18.79■□□□□ 0.6
C9orf85-201ENST00000334731 KDM5BQ9UGL1 1544 aa18.79■□□□□ 0.6
C9orf85-201ENST00000334731 MAPK8IP2Q13387 824 aaPredicted RBP18.74■□□□□ 0.59
C9orf85-201ENST00000334731 P3H3Q8IVL6 736 aa18.74■□□□□ 0.59
C9orf85-201ENST00000334731 GLI2P10070 1586 aa18.7■□□□□ 0.58
C9orf85-201ENST00000334731 ABCA8O94911 1581 aa18.69■□□□□ 0.58
C9orf85-201ENST00000334731 EPRSP07814 1512 aaKnown RBP18.69■□□□□ 0.58
C9orf85-201ENST00000334731 ZCCHC11Q5TAX3 1644 aaKnown RBP18.68■□□□□ 0.58
C9orf85-201ENST00000334731 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
C9orf85-201ENST00000334731 WDR7Q9Y4E6 1490 aa18.64■□□□□ 0.57
C9orf85-201ENST00000334731 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
C9orf85-201ENST00000334731 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
C9orf85-201ENST00000334731 TSPOAP1O95153 1857 aa18.63■□□□□ 0.57
C9orf85-201ENST00000334731 KCNH8Q96L42 1107 aa18.62■□□□□ 0.57
C9orf85-201ENST00000334731 SAMD9Q5K651 1589 aa18.62■□□□□ 0.57
C9orf85-201ENST00000334731 KDM6BO15054 1643 aa18.61■□□□□ 0.57
C9orf85-201ENST00000334731 ARID3CA6NKF2 412 aa18.61■□□□□ 0.57
C9orf85-201ENST00000334731 KIF21BO75037 1637 aa18.6■□□□□ 0.57
C9orf85-201ENST00000334731 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
C9orf85-201ENST00000334731 ATP10BO94823 1461 aa18.58■□□□□ 0.57
C9orf85-201ENST00000334731 PPRC1Q5VV67 1664 aaKnown RBP18.57■□□□□ 0.56
C9orf85-201ENST00000334731 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
C9orf85-201ENST00000334731 MAP3K4Q9Y6R4 1608 aa18.56■□□□□ 0.56
C9orf85-201ENST00000334731 UBTFP17480 764 aaKnown RBP18.56■□□□□ 0.56
C9orf85-201ENST00000334731 FHOD3Q2V2M9 1422 aa18.56■□□□□ 0.56
C9orf85-201ENST00000334731 TEX14Q8IWB6 1497 aa18.54■□□□□ 0.56
C9orf85-201ENST00000334731 COL17A1Q9UMD9 1497 aaPredicted RBP18.54■□□□□ 0.56
C9orf85-201ENST00000334731 CD109Q6YHK3 1445 aa18.53■□□□□ 0.56
C9orf85-201ENST00000334731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
C9orf85-201ENST00000334731 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
C9orf85-201ENST00000334731 MAGI3Q5TCQ9 1506 aa18.49■□□□□ 0.55
C9orf85-201ENST00000334731 RAPGEF6Q8TEU7 1601 aa18.49■□□□□ 0.55
C9orf85-201ENST00000334731 NUP153P49790 1475 aaKnown RBP18.49■□□□□ 0.55
C9orf85-201ENST00000334731 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
C9orf85-201ENST00000334731 KDM4FA0A1W2PPD8 638 aa18.45■□□□□ 0.54
C9orf85-201ENST00000334731 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
C9orf85-201ENST00000334731 PLEKHD1A6NEE1 506 aa18.43■□□□□ 0.54
C9orf85-201ENST00000334731 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.54
C9orf85-201ENST00000334731 PPP4R3CPQ6ZMV5 832 aa18.38■□□□□ 0.53
C9orf85-201ENST00000334731 ABCA9Q8IUA7 1624 aa18.37■□□□□ 0.53
C9orf85-201ENST00000334731 FMN1Q68DA7 1419 aa18.36■□□□□ 0.53
C9orf85-201ENST00000334731 PHLDB1Q86UU1 1377 aa18.35■□□□□ 0.53
C9orf85-201ENST00000334731 ATP1B4Q9UN42 357 aaPredicted RBP18.35■□□□□ 0.53
C9orf85-201ENST00000334731 ARAP3Q8WWN8 1544 aa18.34■□□□□ 0.53
C9orf85-201ENST00000334731 CDK13Q14004 1512 aaKnown RBP18.31■□□□□ 0.52
C9orf85-201ENST00000334731 RAPGEF3O95398 923 aa18.3■□□□□ 0.52
C9orf85-201ENST00000334731 NEO1Q92859 1461 aa18.3■□□□□ 0.52
C9orf85-201ENST00000334731 ADGRL1O94910 1474 aa18.27■□□□□ 0.52
C9orf85-201ENST00000334731 CDK11AQ9UQ88 783 aaPredicted RBP18.26■□□□□ 0.51
C9orf85-201ENST00000334731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.26■□□□□ 0.51
C9orf85-201ENST00000334731 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
C9orf85-201ENST00000334731 AKNAQ7Z591 1439 aa18.22■□□□□ 0.51
C9orf85-201ENST00000334731 FANCAO15360 1455 aa18.21■□□□□ 0.51
C9orf85-201ENST00000334731 PLCH2O75038 1416 aa18.2■□□□□ 0.5
C9orf85-201ENST00000334731 CASKIN1Q8WXD9 1431 aa18.2■□□□□ 0.5
C9orf85-201ENST00000334731 TTC37Q6PGP7 1564 aa18.2■□□□□ 0.5
C9orf85-201ENST00000334731 CLIP1P30622 1438 aa18.19■□□□□ 0.5
C9orf85-201ENST00000334731 TROQ12816 1431 aaPredicted RBP18.18■□□□□ 0.5
C9orf85-201ENST00000334731 DENND4BO75064 1496 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms