RNA–Protein interactions for RNA: ENST00000333991.5

APAF1-201, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 5 BASIC

Gene APAF1, Length 4,539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-201ENST00000333991 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
APAF1-201ENST00000333991 GOLGA3Q08378 1498 aa20.73■□□□□ 0.91
APAF1-201ENST00000333991 CUX2O14529 1486 aa20.73■□□□□ 0.91
APAF1-201ENST00000333991 TDRD9Q8NDG6 1382 aaKnown RBP20.73■□□□□ 0.91
APAF1-201ENST00000333991 CHGAP10645 457 aaKnown RBP20.72■□□□□ 0.91
APAF1-201ENST00000333991 TSPY4P0CV99 314 aa20.72■□□□□ 0.91
APAF1-201ENST00000333991 TSPY10P0CW01 314 aa20.72■□□□□ 0.91
APAF1-201ENST00000333991 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
APAF1-201ENST00000333991 HNRNPUQ00839 825 aaKnown RBP eCLIP20.71■□□□□ 0.91
APAF1-201ENST00000333991 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
APAF1-201ENST00000333991 ABCC8Q09428 1581 aa20.71■□□□□ 0.91
APAF1-201ENST00000333991 PLEKHD1A6NEE1 506 aa20.7■□□□□ 0.9
APAF1-201ENST00000333991 ESF1Q9H501 851 aaKnown RBP20.7■□□□□ 0.9
APAF1-201ENST00000333991 DDX10Q13206 875 aaKnown RBP20.69■□□□□ 0.9
APAF1-201ENST00000333991 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
APAF1-201ENST00000333991 RRP7BPQ9NSQ0 103 aa20.66■□□□□ 0.9
APAF1-201ENST00000333991 CADPSQ9ULU8 1353 aa20.65■□□□□ 0.9
APAF1-201ENST00000333991 PDS5BQ9NTI5 1447 aa20.64■□□□□ 0.9
APAF1-201ENST00000333991 NEFMP07197 916 aa20.63■□□□□ 0.89
APAF1-201ENST00000333991 TNIKQ9UKE5 1360 aa20.62■□□□□ 0.89
APAF1-201ENST00000333991 CEP164Q9UPV0 1460 aa20.61■□□□□ 0.89
APAF1-201ENST00000333991 IRX6P78412 446 aaPredicted RBP20.61■□□□□ 0.89
APAF1-201ENST00000333991 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.61■□□□□ 0.89
APAF1-201ENST00000333991 CCDC136Q96JN2 1154 aa20.59■□□□□ 0.89
APAF1-201ENST00000333991 STAG3Q9UJ98 1225 aa20.57■□□□□ 0.88
APAF1-201ENST00000333991 PPM1GO15355 546 aaPredicted RBP20.55■□□□□ 0.88
APAF1-201ENST00000333991 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
APAF1-201ENST00000333991 CFDP1Q9UEE9 299 aaPredicted RBP20.54■□□□□ 0.88
APAF1-201ENST00000333991 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
APAF1-201ENST00000333991 SMARCA4P51532 1647 aa20.51■□□□□ 0.87
APAF1-201ENST00000333991 TONSLQ96HA7 1378 aa20.51■□□□□ 0.87
APAF1-201ENST00000333991 KDM2AQ9Y2K7 1162 aa20.5■□□□□ 0.87
APAF1-201ENST00000333991 PPP4R2Q9NY27 417 aa20.48■□□□□ 0.87
APAF1-201ENST00000333991 ANO8Q9HCE9 1232 aaPredicted RBP20.46■□□□□ 0.87
APAF1-201ENST00000333991 EIF4G1Q04637 1599 aaKnown RBP20.46■□□□□ 0.87
APAF1-201ENST00000333991 HIRIP3Q9BW71 556 aaPredicted RBP20.42■□□□□ 0.86
APAF1-201ENST00000333991 FANCIQ9NVI1 1328 aa20.41■□□□□ 0.86
APAF1-201ENST00000333991 DDRGK1Q96HY6 314 aa20.39■□□□□ 0.86
APAF1-201ENST00000333991 RGL3Q3MIN7 710 aa20.36■□□□□ 0.85
APAF1-201ENST00000333991 LAS1LQ9Y4W2 734 aaKnown RBP20.35■□□□□ 0.85
APAF1-201ENST00000333991 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
APAF1-201ENST00000333991 ANP32BQ92688 251 aaKnown RBP20.34■□□□□ 0.85
APAF1-201ENST00000333991 NAP1L5Q96NT1 182 aaPredicted RBP20.34■□□□□ 0.85
APAF1-201ENST00000333991 FAM9BQ8IZU0 186 aa20.34■□□□□ 0.85
APAF1-201ENST00000333991 FANCD2Q9BXW9 1451 aa20.33■□□□□ 0.84
APAF1-201ENST00000333991 RUSC2Q8N2Y8 1516 aa20.3■□□□□ 0.84
APAF1-201ENST00000333991 TRHP20396 242 aaPredicted RBP20.3■□□□□ 0.84
APAF1-201ENST00000333991 ARID4BQ4LE39 1312 aaPredicted RBP20.29■□□□□ 0.84
APAF1-201ENST00000333991 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
APAF1-201ENST00000333991 JPH4Q96JJ6 628 aa20.25■□□□□ 0.83
APAF1-201ENST00000333991 FHAD1B1AJZ9 1412 aa20.25■□□□□ 0.83
APAF1-201ENST00000333991 RSPH6AQ9H0K4 717 aa20.25■□□□□ 0.83
APAF1-201ENST00000333991 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
APAF1-201ENST00000333991 B4GALNT3Q6L9W6 998 aa20.24■□□□□ 0.83
APAF1-201ENST00000333991 ARXQ96QS3 562 aa20.23■□□□□ 0.83
APAF1-201ENST00000333991 SLC24A1O60721 1099 aa20.23■□□□□ 0.83
APAF1-201ENST00000333991 SALL2Q9Y467 1007 aaPredicted RBP20.22■□□□□ 0.83
APAF1-201ENST00000333991 CCNB3Q8WWL7 1395 aa20.22■□□□□ 0.83
APAF1-201ENST00000333991 PKNOX2Q96KN3 472 aa20.21■□□□□ 0.83
APAF1-201ENST00000333991 SIN3AQ96ST3 1273 aa20.2■□□□□ 0.82
APAF1-201ENST00000333991 RAPGEF2Q9Y4G8 1499 aa20.19■□□□□ 0.82
APAF1-201ENST00000333991 MRS2Q9HD23 443 aa20.19■□□□□ 0.82
APAF1-201ENST00000333991 CCER2I3L3R5 266 aa20.18■□□□□ 0.82
APAF1-201ENST00000333991 TNNT2P45379 298 aaPredicted RBP20.18■□□□□ 0.82
APAF1-201ENST00000333991 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
APAF1-201ENST00000333991 IPO9Q96P70 1041 aaKnown RBP20.18■□□□□ 0.82
APAF1-201ENST00000333991 HSP90AA1P07900 732 aaKnown RBP20.16■□□□□ 0.82
APAF1-201ENST00000333991 CARMIL2Q6F5E8 1435 aa20.16■□□□□ 0.82
APAF1-201ENST00000333991 TRIM44Q96DX7 344 aaPredicted RBP20.16■□□□□ 0.82
APAF1-201ENST00000333991 VPS8Q8N3P4 1428 aa20.16■□□□□ 0.82
APAF1-201ENST00000333991 USP35Q9P2H5 1018 aa20.15■□□□□ 0.82
APAF1-201ENST00000333991 MLECQ14165 292 aa20.15■□□□□ 0.82
APAF1-201ENST00000333991 RAD54L2Q9Y4B4 1467 aa20.13■□□□□ 0.81
APAF1-201ENST00000333991 FHOD3Q2V2M9 1422 aa20.13■□□□□ 0.81
APAF1-201ENST00000333991 UPF2Q9HAU5 1272 aaKnown RBP20.13■□□□□ 0.81
APAF1-201ENST00000333991 PPP1R15AO75807 674 aaPredicted RBP20.11■□□□□ 0.81
APAF1-201ENST00000333991 NESP48681 1621 aa20.1■□□□□ 0.81
APAF1-201ENST00000333991 PLEKHG5O94827 1062 aa20.09■□□□□ 0.81
APAF1-201ENST00000333991 CYB5RLQ6IPT4 315 aa20.07■□□□□ 0.8
APAF1-201ENST00000333991 UBE2Q2Q8WVN8 375 aa20.06■□□□□ 0.8
APAF1-201ENST00000333991 FGD5Q6ZNL6 1462 aa20.06■□□□□ 0.8
APAF1-201ENST00000333991 IGF1RP08069 1367 aa20.06■□□□□ 0.8
APAF1-201ENST00000333991 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
APAF1-201ENST00000333991 GGT6Q6P531 493 aa20.05■□□□□ 0.8
APAF1-201ENST00000333991 HSP90AA2PQ14568 343 aaPredicted RBP20.05■□□□□ 0.8
APAF1-201ENST00000333991 PNNQ9H307 717 aaKnown RBP20.05■□□□□ 0.8
APAF1-201ENST00000333991 L1TD1Q5T7N2 865 aaKnown RBP20.04■□□□□ 0.8
APAF1-201ENST00000333991 BECN1Q14457 450 aa20.03■□□□□ 0.8
APAF1-201ENST00000333991 AQRO60306 1485 aaKnown RBP eCLIP20.03■□□□□ 0.8
APAF1-201ENST00000333991 FOXD1Q16676 465 aa20.03■□□□□ 0.8
APAF1-201ENST00000333991 FMN1Q68DA7 1419 aa20.02■□□□□ 0.8
APAF1-201ENST00000333991 NCLP19338 710 aaKnown RBP20■□□□□ 0.79
APAF1-201ENST00000333991 OSCARQ8IYS5 282 aa19.99■□□□□ 0.79
APAF1-201ENST00000333991 EFCAB2Q5VUJ9 269 aa19.98■□□□□ 0.79
APAF1-201ENST00000333991 CC2D2AQ9P2K1 1620 aa19.98■□□□□ 0.79
APAF1-201ENST00000333991 HNRNPMP52272 730 aaKnown RBP eCLIP19.97■□□□□ 0.79
APAF1-201ENST00000333991 TMC1Q8TDI8 760 aa19.97■□□□□ 0.79
APAF1-201ENST00000333991 IL27Q8NEV9 243 aa19.97■□□□□ 0.79
APAF1-201ENST00000333991 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
APAF1-201ENST00000333991 TIMELESSQ9UNS1 1208 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms