RNA–Protein interactions for RNA: ENST00000332904.7

CDHR1-201, Transcript of cadherin related family member 1, humanhuman

TSL 1 (best) BASIC

Gene CDHR1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-201ENST00000332904 HNRNPUQ00839 825 aaKnown RBP eCLIP25.23■■□□□ 1.63
CDHR1-201ENST00000332904 SETD5Q9C0A6 1442 aa25.17■■□□□ 1.62
CDHR1-201ENST00000332904 PRXQ9BXM0 1461 aa25.16■■□□□ 1.62
CDHR1-201ENST00000332904 NBR1Q14596 966 aa25.15■■□□□ 1.62
CDHR1-201ENST00000332904 PABPN1Q86U42 306 aaKnown RBP eCLIP25.14■■□□□ 1.62
CDHR1-201ENST00000332904 FAM50AQ14320 339 aaKnown RBP25.12■■□□□ 1.61
CDHR1-201ENST00000332904 ERICH3Q5RHP9 1530 aa25.11■■□□□ 1.61
CDHR1-201ENST00000332904 UNC13AQ9UPW8 1703 aa25.1■■□□□ 1.61
CDHR1-201ENST00000332904 ANO8Q9HCE9 1232 aaPredicted RBP25.09■■□□□ 1.61
CDHR1-201ENST00000332904 B4GALNT3Q6L9W6 998 aa25.07■■□□□ 1.6
CDHR1-201ENST00000332904 ARHGAP35Q9NRY4 1499 aa25.07■■□□□ 1.6
CDHR1-201ENST00000332904 MYT1LQ9UL68 1186 aa25.06■■□□□ 1.6
CDHR1-201ENST00000332904 TOP2BQ02880 1626 aa25.05■■□□□ 1.6
CDHR1-201ENST00000332904 PAK3O75914 559 aaPredicted RBP25.05■■□□□ 1.6
CDHR1-201ENST00000332904 PPP4R2Q9NY27 417 aa25.02■■□□□ 1.6
CDHR1-201ENST00000332904 PHLDB1Q86UU1 1377 aa25■■□□□ 1.59
CDHR1-201ENST00000332904 NOP58Q9Y2X3 529 aaKnown RBP24.98■■□□□ 1.59
CDHR1-201ENST00000332904 TIMELESSQ9UNS1 1208 aa24.97■■□□□ 1.59
CDHR1-201ENST00000332904 CCDC184Q52MB2 194 aa24.93■■□□□ 1.58
CDHR1-201ENST00000332904 PEG3Q9GZU2 1588 aa24.92■■□□□ 1.58
CDHR1-201ENST00000332904 TONSLQ96HA7 1378 aa24.91■■□□□ 1.58
CDHR1-201ENST00000332904 SALL2Q9Y467 1007 aaPredicted RBP24.89■■□□□ 1.58
CDHR1-201ENST00000332904 TIAM1Q13009 1591 aa24.89■■□□□ 1.57
CDHR1-201ENST00000332904 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
CDHR1-201ENST00000332904 ATP1B4Q9UN42 357 aaPredicted RBP24.86■■□□□ 1.57
CDHR1-201ENST00000332904 LRRC9Q6ZRR7 1453 aa24.85■■□□□ 1.57
CDHR1-201ENST00000332904 ERICH6BQ5W0A0 696 aa24.85■■□□□ 1.57
CDHR1-201ENST00000332904 ATAD2BQ9ULI0 1458 aa24.84■■□□□ 1.57
CDHR1-201ENST00000332904 FAM9BQ8IZU0 186 aa24.83■■□□□ 1.57
CDHR1-201ENST00000332904 KIF27Q86VH2 1401 aa24.82■■□□□ 1.56
CDHR1-201ENST00000332904 IL27Q8NEV9 243 aa24.79■■□□□ 1.56
CDHR1-201ENST00000332904 WASHC2AQ641Q2 1341 aa24.79■■□□□ 1.56
CDHR1-201ENST00000332904 CCDC136Q96JN2 1154 aa24.79■■□□□ 1.56
CDHR1-201ENST00000332904 RTN4Q9NQC3 1192 aaKnown RBP24.78■■□□□ 1.56
CDHR1-201ENST00000332904 P3H3Q8IVL6 736 aa24.78■■□□□ 1.56
CDHR1-201ENST00000332904 CUX1P39880 1505 aa24.73■■□□□ 1.55
CDHR1-201ENST00000332904 BICRAQ9NZM4 1560 aa24.73■■□□□ 1.55
CDHR1-201ENST00000332904 RTL5Q5HYW3 569 aaPredicted RBP24.71■■□□□ 1.55
CDHR1-201ENST00000332904 HSPA5P11021 654 aaKnown RBP24.71■■□□□ 1.55
CDHR1-201ENST00000332904 MAP3K1Q13233 1512 aa24.68■■□□□ 1.54
CDHR1-201ENST00000332904 IPO9Q96P70 1041 aaKnown RBP24.68■■□□□ 1.54
CDHR1-201ENST00000332904 MRS2Q9HD23 443 aa24.67■■□□□ 1.54
CDHR1-201ENST00000332904 ANP32AP39687 249 aaKnown RBP24.66■■□□□ 1.54
CDHR1-201ENST00000332904 FHAD1B1AJZ9 1412 aa24.65■■□□□ 1.54
CDHR1-201ENST00000332904 ZBTB47Q9UFB7 747 aaPredicted RBP24.64■■□□□ 1.53
CDHR1-201ENST00000332904 SENP3-EIF4A1A0A087X0R7 540 aa24.63■■□□□ 1.53
CDHR1-201ENST00000332904 ZBED9Q6R2W3 1325 aa24.62■■□□□ 1.53
CDHR1-201ENST00000332904 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.62■■□□□ 1.53
CDHR1-201ENST00000332904 CCDC18Q5T9S5 1454 aa24.62■■□□□ 1.53
CDHR1-201ENST00000332904 PRKRIP1Q9H875 184 aaPredicted RBP24.61■■□□□ 1.53
CDHR1-201ENST00000332904 AKNAQ7Z591 1439 aa24.61■■□□□ 1.53
CDHR1-201ENST00000332904 C11orf95C9JLR9 678 aaPredicted RBP24.6■■□□□ 1.53
CDHR1-201ENST00000332904 KDM5BQ9UGL1 1544 aa24.6■■□□□ 1.53
CDHR1-201ENST00000332904 CNGB1Q14028 1251 aaPredicted RBP24.58■■□□□ 1.53
CDHR1-201ENST00000332904 PCF11O94913 1555 aaKnown RBP24.56■■□□□ 1.52
CDHR1-201ENST00000332904 AQRO60306 1485 aaKnown RBP eCLIP24.56■■□□□ 1.521e-8■■■□□ 18.6
CDHR1-201ENST00000332904 IGF1RP08069 1367 aa24.56■■□□□ 1.52
CDHR1-201ENST00000332904 CNTLNQ9NXG0 1405 aa24.55■■□□□ 1.52
CDHR1-201ENST00000332904 PTPRKQ15262 1439 aa24.55■■□□□ 1.52
CDHR1-201ENST00000332904 UACAQ9BZF9 1416 aa24.54■■□□□ 1.52
CDHR1-201ENST00000332904 NPM2Q86SE8 214 aaKnown RBP24.53■■□□□ 1.52
CDHR1-201ENST00000332904 EIF4G2P78344 907 aaKnown RBP eCLIP24.52■■□□□ 1.52
CDHR1-201ENST00000332904 CFAP43Q8NDM7 1665 aa24.52■■□□□ 1.52
CDHR1-201ENST00000332904 LAS1LQ9Y4W2 734 aaKnown RBP24.51■■□□□ 1.51
CDHR1-201ENST00000332904 NCOA2Q15596 1464 aa24.48■■□□□ 1.51
CDHR1-201ENST00000332904 FHOD3Q2V2M9 1422 aa24.47■■□□□ 1.51
CDHR1-201ENST00000332904 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
CDHR1-201ENST00000332904 FGD6Q6ZV73 1430 aa24.46■■□□□ 1.51
CDHR1-201ENST00000332904 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
CDHR1-201ENST00000332904 PTPN23Q9H3S7 1636 aa24.44■■□□□ 1.5
CDHR1-201ENST00000332904 CCDC7Q96M83 1385 aa24.43■■□□□ 1.5
CDHR1-201ENST00000332904 NEFMP07197 916 aa24.43■■□□□ 1.5
CDHR1-201ENST00000332904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.42■■□□□ 1.5
CDHR1-201ENST00000332904 NAIPQ13075 1403 aa24.41■■□□□ 1.5
CDHR1-201ENST00000332904 RRP7BPQ9NSQ0 103 aa24.38■■□□□ 1.49
CDHR1-201ENST00000332904 SMG6Q86US8 1419 aaKnown RBP24.38■■□□□ 1.49
CDHR1-201ENST00000332904 NUDCQ9Y266 331 aa24.38■■□□□ 1.49
CDHR1-201ENST00000332904 FOXD1Q16676 465 aa24.36■■□□□ 1.49
CDHR1-201ENST00000332904 L3MBTL2Q969R5 705 aa24.36■■□□□ 1.49
CDHR1-201ENST00000332904 CHIC2Q9UKJ5 165 aa24.36■■□□□ 1.49
CDHR1-201ENST00000332904 NCOA1Q15788 1441 aa24.36■■□□□ 1.49
CDHR1-201ENST00000332904 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
CDHR1-201ENST00000332904 RNF123Q5XPI4 1314 aa24.33■■□□□ 1.48
CDHR1-201ENST00000332904 KIF7Q2M1P5 1343 aa24.31■■□□□ 1.48
CDHR1-201ENST00000332904 BRPF3Q9ULD4 1205 aa24.31■■□□□ 1.48
CDHR1-201ENST00000332904 FMN1Q68DA7 1419 aa24.3■■□□□ 1.48
CDHR1-201ENST00000332904 FYCO1Q9BQS8 1478 aa24.3■■□□□ 1.48
CDHR1-201ENST00000332904 MTUS2Q5JR59 1369 aa24.29■■□□□ 1.48
CDHR1-201ENST00000332904 DENND4BO75064 1496 aaPredicted RBP24.29■■□□□ 1.48
CDHR1-201ENST00000332904 NBPF8Q3BBV2 869 aa24.28■■□□□ 1.48
CDHR1-201ENST00000332904 POLR3GLQ9BT43 218 aa24.28■■□□□ 1.48
CDHR1-201ENST00000332904 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
CDHR1-201ENST00000332904 FGD5Q6ZNL6 1462 aa24.24■■□□□ 1.47
CDHR1-201ENST00000332904 PDE4AP27815 886 aa24.23■■□□□ 1.47
CDHR1-201ENST00000332904 WASHC2CQ9Y4E1 1318 aa24.22■■□□□ 1.47
CDHR1-201ENST00000332904 CFTRP13569 1480 aa24.21■■□□□ 1.47
CDHR1-201ENST00000332904 EXOC6Q8TAG9 804 aa24.21■■□□□ 1.47
CDHR1-201ENST00000332904 USP35Q9P2H5 1018 aa24.19■■□□□ 1.46
CDHR1-201ENST00000332904 EIF5BO60841 1220 aaKnown RBP24.19■■□□□ 1.46
CDHR1-201ENST00000332904 MPHOSPH9Q99550 1183 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms