RNA–Protein interactions for RNA: ENST00000332624.7

TRAK2-201, Transcript of trafficking kinesin protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAK2, Length 6,510 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK2-201ENST00000332624 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
TRAK2-201ENST00000332624 ANP32BQ92688 251 aaKnown RBP13.46□□□□□ -0.25
TRAK2-201ENST00000332624 CCDC180Q9P1Z9 1646 aa13.45□□□□□ -0.26
TRAK2-201ENST00000332624 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
TRAK2-201ENST00000332624 CHMP7Q8WUX9 453 aaPredicted RBP13.43□□□□□ -0.26
TRAK2-201ENST00000332624 WRNQ14191 1432 aaPredicted RBP eCLIP13.41□□□□□ -0.26
TRAK2-201ENST00000332624 SENP3-EIF4A1A0A087X0R7 540 aa13.41□□□□□ -0.26
TRAK2-201ENST00000332624 GLIPR1L2Q4G1C9 344 aa13.4□□□□□ -0.26
TRAK2-201ENST00000332624 ARXQ96QS3 562 aa13.39□□□□□ -0.27
TRAK2-201ENST00000332624 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
TRAK2-201ENST00000332624 RGL3Q3MIN7 710 aa13.37□□□□□ -0.27
TRAK2-201ENST00000332624 SUPT16HQ9Y5B9 1047 aaKnown RBP13.35□□□□□ -0.27
TRAK2-201ENST00000332624 SIN3AQ96ST3 1273 aa13.35□□□□□ -0.27
TRAK2-201ENST00000332624 SENP3Q9H4L4 574 aaPredicted RBP13.33□□□□□ -0.27
TRAK2-201ENST00000332624 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
TRAK2-201ENST00000332624 PLEKHD1A6NEE1 506 aa13.33□□□□□ -0.28
TRAK2-201ENST00000332624 CEP164Q9UPV0 1460 aa13.32□□□□□ -0.28
TRAK2-201ENST00000332624 KIF27Q86VH2 1401 aa13.31□□□□□ -0.28
TRAK2-201ENST00000332624 CFDP1Q9UEE9 299 aaPredicted RBP13.3□□□□□ -0.28
TRAK2-201ENST00000332624 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
TRAK2-201ENST00000332624 CARD11Q9BXL7 1154 aa13.28□□□□□ -0.28
TRAK2-201ENST00000332624 BAZ1BQ9UIG0 1483 aaKnown RBP13.27□□□□□ -0.29
TRAK2-201ENST00000332624 MYH16Q9H6N6 1097 aa13.27□□□□□ -0.29
TRAK2-201ENST00000332624 KNSTRNQ9Y448 316 aa13.25□□□□□ -0.29
TRAK2-201ENST00000332624 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
TRAK2-201ENST00000332624 ANP32EQ9BTT0 268 aa13.22□□□□□ -0.29
TRAK2-201ENST00000332624 BECN1Q14457 450 aa13.22□□□□□ -0.29
TRAK2-201ENST00000332624 CCNB3Q8WWL7 1395 aa13.21□□□□□ -0.29
TRAK2-201ENST00000332624 CDCA8Q53HL2 280 aa13.21□□□□□ -0.3
TRAK2-201ENST00000332624 CECR2Q9BXF3 1484 aa13.2□□□□□ -0.3
TRAK2-201ENST00000332624 SOGA1O94964 1423 aa13.2□□□□□ -0.3
TRAK2-201ENST00000332624 PPP4R2Q9NY27 417 aa13.2□□□□□ -0.3
TRAK2-201ENST00000332624 PPP1R15AO75807 674 aaPredicted RBP13.2□□□□□ -0.3
TRAK2-201ENST00000332624 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
TRAK2-201ENST00000332624 CFAP53Q96M91 514 aa13.19□□□□□ -0.3
TRAK2-201ENST00000332624 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
TRAK2-201ENST00000332624 NACADO15069 1562 aa13.18□□□□□ -0.3
TRAK2-201ENST00000332624 PPM1GO15355 546 aaPredicted RBP13.16□□□□□ -0.3
TRAK2-201ENST00000332624 B4GALNT3Q6L9W6 998 aa13.16□□□□□ -0.3
TRAK2-201ENST00000332624 ZBTB7CA1YPR0 619 aa13.15□□□□□ -0.3
TRAK2-201ENST00000332624 C14orf37Q86TY3 774 aa13.15□□□□□ -0.3
TRAK2-201ENST00000332624 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.31
TRAK2-201ENST00000332624 RGS3P49796 1198 aa13.14□□□□□ -0.31
TRAK2-201ENST00000332624 FTSJ3Q8IY81 847 aaKnown RBP13.14□□□□□ -0.31
TRAK2-201ENST00000332624 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
TRAK2-201ENST00000332624 LAS1LQ9Y4W2 734 aaKnown RBP13.12□□□□□ -0.31
TRAK2-201ENST00000332624 FHAD1B1AJZ9 1412 aa13.12□□□□□ -0.31
TRAK2-201ENST00000332624 TNNT2P45379 298 aaPredicted RBP13.11□□□□□ -0.31
TRAK2-201ENST00000332624 FRAT1Q92837 279 aaPredicted RBP13.11□□□□□ -0.31
TRAK2-201ENST00000332624 TIMELESSQ9UNS1 1208 aa13.11□□□□□ -0.31
TRAK2-201ENST00000332624 CARMIL1Q5VZK9 1371 aa13.11□□□□□ -0.31
TRAK2-201ENST00000332624 TRIM44Q96DX7 344 aaPredicted RBP13.11□□□□□ -0.31
TRAK2-201ENST00000332624 GOLGA6L22H0YM25 854 aa13.11□□□□□ -0.31
TRAK2-201ENST00000332624 DCAF11Q8TEB1 546 aa13.1□□□□□ -0.31
TRAK2-201ENST00000332624 KANK4Q5T7N3 995 aaPredicted RBP13.1□□□□□ -0.31
TRAK2-201ENST00000332624 A0A0G2JS52 829 aa13.09□□□□□ -0.31
TRAK2-201ENST00000332624 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
TRAK2-201ENST00000332624 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
TRAK2-201ENST00000332624 NOP58Q9Y2X3 529 aaKnown RBP13.08□□□□□ -0.32
TRAK2-201ENST00000332624 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.32
TRAK2-201ENST00000332624 CUX2O14529 1486 aa13.08□□□□□ -0.32
TRAK2-201ENST00000332624 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
TRAK2-201ENST00000332624 NUDCQ9Y266 331 aa13.07□□□□□ -0.32
TRAK2-201ENST00000332624 SETD5Q9C0A6 1442 aa13.07□□□□□ -0.32
TRAK2-201ENST00000332624 HSPA5P11021 654 aaKnown RBP13.06□□□□□ -0.32
TRAK2-201ENST00000332624 POGKQ9P215 609 aa13.05□□□□□ -0.32
TRAK2-201ENST00000332624 TMF1P82094 1093 aa13.04□□□□□ -0.32
TRAK2-201ENST00000332624 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
TRAK2-201ENST00000332624 FOXD1Q16676 465 aa13.03□□□□□ -0.32
TRAK2-201ENST00000332624 ABCC8Q09428 1581 aa13.02□□□□□ -0.32
TRAK2-201ENST00000332624 CCDC88BA6NC98 1476 aa13.02□□□□□ -0.33
TRAK2-201ENST00000332624 CASC1Q6TDU7 716 aa13.01□□□□□ -0.33
TRAK2-201ENST00000332624 RBM19Q9Y4C8 960 aaKnown RBP13.01□□□□□ -0.33
TRAK2-201ENST00000332624 ARID4BQ4LE39 1312 aaPredicted RBP13.01□□□□□ -0.33
TRAK2-201ENST00000332624 TPRNQ4KMQ1 711 aa13.01□□□□□ -0.33
TRAK2-201ENST00000332624 RTN4Q9NQC3 1192 aaKnown RBP13.01□□□□□ -0.33
TRAK2-201ENST00000332624 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
TRAK2-201ENST00000332624 EIF4G1Q04637 1599 aaKnown RBP13□□□□□ -0.33
TRAK2-201ENST00000332624 RAB3GAP2Q9H2M9 1393 aa13□□□□□ -0.33
TRAK2-201ENST00000332624 PKD2Q13563 968 aa12.99□□□□□ -0.33
TRAK2-201ENST00000332624 ARHGAP35Q9NRY4 1499 aa12.99□□□□□ -0.33
TRAK2-201ENST00000332624 PTMAP06454 111 aaKnown RBP12.99□□□□□ -0.33
TRAK2-201ENST00000332624 ERICH6BQ5W0A0 696 aa12.98□□□□□ -0.33
TRAK2-201ENST00000332624 MS4A1P11836 297 aa12.96□□□□□ -0.33
TRAK2-201ENST00000332624 MPHOSPH9Q99550 1183 aa12.94□□□□□ -0.34
TRAK2-201ENST00000332624 CHMP4BQ9H444 224 aaKnown RBP12.94□□□□□ -0.34
TRAK2-201ENST00000332624 ERCC6Q03468 1493 aa12.94□□□□□ -0.34
TRAK2-201ENST00000332624 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
TRAK2-201ENST00000332624 LMOD2Q6P5Q4 547 aa12.94□□□□□ -0.34
TRAK2-201ENST00000332624 MORC1Q86VD1 984 aa12.94□□□□□ -0.34
TRAK2-201ENST00000332624 SAFB2Q14151 953 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAK2-201ENST00000332624 DNTTIP2Q5QJE6 756 aaKnown RBP12.93□□□□□ -0.34
TRAK2-201ENST00000332624 ZRSR1Q15695 479 aaKnown RBP12.93□□□□□ -0.34
TRAK2-201ENST00000332624 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
TRAK2-201ENST00000332624 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
TRAK2-201ENST00000332624 KTN1Q86UP2 1357 aaKnown RBP12.92□□□□□ -0.34
TRAK2-201ENST00000332624 KANK1Q14678 1352 aa12.91□□□□□ -0.34
TRAK2-201ENST00000332624 PNNQ9H307 717 aaKnown RBP12.9□□□□□ -0.34
TRAK2-201ENST00000332624 RCAN3Q9UKA8 241 aa12.9□□□□□ -0.34
TRAK2-201ENST00000332624 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms