RNA–Protein interactions for RNA: ENST00000331483.8

P4HB-201, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene P4HB, Length 2,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-201ENST00000331483 MRC2Q9UBG0 1479 aa30.35■■■□□ 2.45
P4HB-201ENST00000331483 AQRO60306 1485 aaKnown RBP eCLIP30.34■■■□□ 2.452e-7■■■■□ 21.8
P4HB-201ENST00000331483 CTTNBP2Q8WZ74 1663 aa30.26■■■□□ 2.43
P4HB-201ENST00000331483 ITGAEP38570 1179 aa30.26■■■□□ 2.43
P4HB-201ENST00000331483 TIAM1Q13009 1591 aa30.24■■■□□ 2.43
P4HB-201ENST00000331483 PCF11O94913 1555 aaKnown RBP30.24■■■□□ 2.43
P4HB-201ENST00000331483 FHAD1B1AJZ9 1412 aa30.24■■■□□ 2.43
P4HB-201ENST00000331483 RRBP1Q9P2E9 1410 aaKnown RBP30.19■■■□□ 2.42
P4HB-201ENST00000331483 ZNF608Q9ULD9 1512 aaPredicted RBP30.18■■■□□ 2.42
P4HB-201ENST00000331483 CCNB3Q8WWL7 1395 aa30.16■■■□□ 2.42
P4HB-201ENST00000331483 EFCAB5A4FU69 1503 aa30.16■■■□□ 2.42
P4HB-201ENST00000331483 ERCC6Q03468 1493 aa30.16■■■□□ 2.42
P4HB-201ENST00000331483 LRRC9Q6ZRR7 1453 aa30.15■■■□□ 2.42
P4HB-201ENST00000331483 PBRM1Q86U86 1689 aa30.12■■■□□ 2.41
P4HB-201ENST00000331483 MAP3K1Q13233 1512 aa30.1■■■□□ 2.41
P4HB-201ENST00000331483 PHLDB1Q86UU1 1377 aa30.09■■■□□ 2.41
P4HB-201ENST00000331483 WDR62O43379 1518 aa30.09■■■□□ 2.41
P4HB-201ENST00000331483 CASKIN1Q8WXD9 1431 aa30.06■■■□□ 2.4
P4HB-201ENST00000331483 GRIN2BQ13224 1484 aa30.04■■■□□ 2.4
P4HB-201ENST00000331483 IFT140Q96RY7 1462 aa30.04■■■□□ 2.4
P4HB-201ENST00000331483 FYCO1Q9BQS8 1478 aa30.04■■■□□ 2.4
P4HB-201ENST00000331483 FMN1Q68DA7 1419 aa30.03■■■□□ 2.4
P4HB-201ENST00000331483 CFAP43Q8NDM7 1665 aa30.01■■■□□ 2.4
P4HB-201ENST00000331483 ADAMTS12P58397 1594 aa30.01■■■□□ 2.39
P4HB-201ENST00000331483 FAM50AQ14320 339 aaKnown RBP30.01■■■□□ 2.39
P4HB-201ENST00000331483 SAMD9Q5K651 1589 aa30■■■□□ 2.39
P4HB-201ENST00000331483 SNAPC4Q5SXM2 1469 aa29.99■■■□□ 2.39
P4HB-201ENST00000331483 DHX57Q6P158 1386 aaKnown RBP29.93■■■□□ 2.38
P4HB-201ENST00000331483 ARID3CA6NKF2 412 aa29.89■■■□□ 2.37
P4HB-201ENST00000331483 IQGAP2Q13576 1575 aa29.88■■■□□ 2.37
P4HB-201ENST00000331483 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
P4HB-201ENST00000331483 EIF4G3O43432 1585 aaKnown RBP29.88■■■□□ 2.37
P4HB-201ENST00000331483 MTUS2Q5JR59 1369 aa29.87■■■□□ 2.37
P4HB-201ENST00000331483 LRRIQ1Q96JM4 1722 aa29.84■■■□□ 2.37
P4HB-201ENST00000331483 FBLN2P98095 1184 aa29.84■■■□□ 2.37
P4HB-201ENST00000331483 RAB3GAP2Q9H2M9 1393 aa29.8■■■□□ 2.36
P4HB-201ENST00000331483 DIEXFQ68CQ4 756 aaKnown RBP29.77■■■□□ 2.36
P4HB-201ENST00000331483 CHMP7Q8WUX9 453 aaPredicted RBP29.75■■■□□ 2.35
P4HB-201ENST00000331483 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
P4HB-201ENST00000331483 ZNF316A6NFI3 1004 aaPredicted RBP29.74■■■□□ 2.35
P4HB-201ENST00000331483 FGD6Q6ZV73 1430 aa29.69■■■□□ 2.34
P4HB-201ENST00000331483 KIAA0586Q9BVV6 1533 aa29.69■■■□□ 2.34
P4HB-201ENST00000331483 SETD5Q9C0A6 1442 aa29.68■■■□□ 2.34
P4HB-201ENST00000331483 MAGI3Q5TCQ9 1506 aa29.67■■■□□ 2.34
P4HB-201ENST00000331483 NCOA2Q15596 1464 aa29.67■■■□□ 2.34
P4HB-201ENST00000331483 UGGT2Q9NYU1 1516 aa29.66■■■□□ 2.34
P4HB-201ENST00000331483 CLSPNQ9HAW4 1339 aa29.66■■■□□ 2.34
P4HB-201ENST00000331483 CDK13Q14004 1512 aaKnown RBP29.64■■■□□ 2.34
P4HB-201ENST00000331483 DISP1Q96F81 1524 aa29.62■■■□□ 2.33
P4HB-201ENST00000331483 MAGI1Q96QZ7 1491 aaPredicted RBP29.62■■■□□ 2.33
P4HB-201ENST00000331483 EPRSP07814 1512 aaKnown RBP29.6■■■□□ 2.33
P4HB-201ENST00000331483 SYNJ2O15056 1496 aa29.59■■■□□ 2.33
P4HB-201ENST00000331483 HECW1Q76N89 1606 aa29.58■■■□□ 2.33
P4HB-201ENST00000331483 EHBP1L1Q8N3D4 1523 aa29.57■■■□□ 2.32
P4HB-201ENST00000331483 MYOM3Q5VTT5 1437 aa29.56■■■□□ 2.32
P4HB-201ENST00000331483 CEP170Q5SW79 1584 aa29.56■■■□□ 2.32
P4HB-201ENST00000331483 CCDC18Q5T9S5 1454 aa29.56■■■□□ 2.32
P4HB-201ENST00000331483 KIAA0556O60303 1618 aa29.56■■■□□ 2.32
P4HB-201ENST00000331483 SUPT6HQ7KZ85 1726 aaKnown RBP29.55■■■□□ 2.32
P4HB-201ENST00000331483 PTPRKQ15262 1439 aa29.54■■■□□ 2.32
P4HB-201ENST00000331483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.52■■■□□ 2.32
P4HB-201ENST00000331483 MAPKBP1O60336 1514 aa29.51■■■□□ 2.31
P4HB-201ENST00000331483 JPH4Q96JJ6 628 aa29.47■■■□□ 2.31
P4HB-201ENST00000331483 SIN3AQ96ST3 1273 aa29.46■■■□□ 2.31
P4HB-201ENST00000331483 CHIC2Q9UKJ5 165 aa29.44■■■□□ 2.3
P4HB-201ENST00000331483 NEUROD1Q13562 356 aa29.44■■■□□ 2.3
P4HB-201ENST00000331483 ARHGEF11O15085 1522 aa29.43■■■□□ 2.3
P4HB-201ENST00000331483 NUP153P49790 1475 aaKnown RBP29.43■■■□□ 2.3
P4HB-201ENST00000331483 PTPN23Q9H3S7 1636 aa29.41■■■□□ 2.3
P4HB-201ENST00000331483 NUP160Q12769 1436 aa29.4■■■□□ 2.3
P4HB-201ENST00000331483 PLB1Q6P1J6 1458 aa29.4■■■□□ 2.3
P4HB-201ENST00000331483 RRP7BPQ9NSQ0 103 aa29.37■■■□□ 2.29
P4HB-201ENST00000331483 RAPGEF6Q8TEU7 1601 aa29.36■■■□□ 2.29
P4HB-201ENST00000331483 HFM1A2PYH4 1435 aa29.32■■■□□ 2.28
P4HB-201ENST00000331483 NAIPQ13075 1403 aa29.3■■■□□ 2.28
P4HB-201ENST00000331483 CARMIL2Q6F5E8 1435 aa29.3■■■□□ 2.28
P4HB-201ENST00000331483 PRG4Q92954 1404 aaPredicted RBP29.29■■■□□ 2.28
P4HB-201ENST00000331483 ZNF644Q9H582 1327 aaPredicted RBP29.29■■■□□ 2.28
P4HB-201ENST00000331483 MIER1Q8N108 512 aa29.27■■■□□ 2.28
P4HB-201ENST00000331483 CDK11AQ9UQ88 783 aaPredicted RBP29.26■■■□□ 2.27
P4HB-201ENST00000331483 TCOF1Q13428 1488 aaKnown RBP29.25■■■□□ 2.27
P4HB-201ENST00000331483 MIA2Q96PC5 1412 aa29.2■■■□□ 2.26
P4HB-201ENST00000331483 UACAQ9BZF9 1416 aa29.16■■■□□ 2.26
P4HB-201ENST00000331483 TROQ12816 1431 aaPredicted RBP29.15■■■□□ 2.26
P4HB-201ENST00000331483 TRIM52Q96A61 297 aa29.14■■■□□ 2.26
P4HB-201ENST00000331483 ZNF777Q9ULD5 760 aaPredicted RBP29.14■■■□□ 2.26
P4HB-201ENST00000331483 YTHDC1Q96MU7 727 aaKnown RBP29.11■■■□□ 2.25
P4HB-201ENST00000331483 KDM6BO15054 1643 aa29.11■■■□□ 2.25
P4HB-201ENST00000331483 CHD1O14646 1710 aa29.11■■■□□ 2.25
P4HB-201ENST00000331483 KIF14Q15058 1648 aa29.1■■■□□ 2.25
P4HB-201ENST00000331483 CFDP1Q9UEE9 299 aaPredicted RBP29.09■■■□□ 2.25
P4HB-201ENST00000331483 DAPK1P53355 1430 aa29.07■■■□□ 2.24
P4HB-201ENST00000331483 PLEKHD1A6NEE1 506 aa29.06■■■□□ 2.24
P4HB-201ENST00000331483 ABCC5O15440 1437 aa29.05■■■□□ 2.24
P4HB-201ENST00000331483 PTPRGP23470 1445 aa29.05■■■□□ 2.24
P4HB-201ENST00000331483 ATP10BO94823 1461 aa29.05■■■□□ 2.24
P4HB-201ENST00000331483 ABCA8O94911 1581 aa29.05■■■□□ 2.24
P4HB-201ENST00000331483 HIRIP3Q9BW71 556 aaPredicted RBP29.02■■■□□ 2.24
P4HB-201ENST00000331483 GPATCH8Q9UKJ3 1502 aaKnown RBP29.02■■■□□ 2.24
P4HB-201ENST00000331483 PPP1R15AO75807 674 aaPredicted RBP29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms