RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 AQRO60306 1485 aaKnown RBP eCLIP24.28■■□□□ 1.485e-7■■■■■ 28.2
PGBD2-201ENST00000329291 ZEB1P37275 1124 aaPredicted RBP24.26■■□□□ 1.47
PGBD2-201ENST00000329291 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
PGBD2-201ENST00000329291 P3H3Q8IVL6 736 aa24.23■■□□□ 1.47
PGBD2-201ENST00000329291 CTTNBP2Q8WZ74 1663 aa24.23■■□□□ 1.47
PGBD2-201ENST00000329291 ZNF608Q9ULD9 1512 aaPredicted RBP24.22■■□□□ 1.47
PGBD2-201ENST00000329291 FHAD1B1AJZ9 1412 aa24.21■■□□□ 1.47
PGBD2-201ENST00000329291 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
PGBD2-201ENST00000329291 CCER1Q8TC90 406 aaPredicted RBP24.16■■□□□ 1.46
PGBD2-201ENST00000329291 HNRNPUL2Q1KMD3 747 aaKnown RBP24.15■■□□□ 1.46
PGBD2-201ENST00000329291 EIF4G3O43432 1585 aaKnown RBP24.14■■□□□ 1.46
PGBD2-201ENST00000329291 EFCAB5A4FU69 1503 aa24.13■■□□□ 1.45
PGBD2-201ENST00000329291 FHOD3Q2V2M9 1422 aa24.11■■□□□ 1.45
PGBD2-201ENST00000329291 SNAPC4Q5SXM2 1469 aa24.06■■□□□ 1.44
PGBD2-201ENST00000329291 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
PGBD2-201ENST00000329291 TIAM1Q13009 1591 aa24■■□□□ 1.43
PGBD2-201ENST00000329291 ATP1B4Q9UN42 357 aaPredicted RBP24■■□□□ 1.43
PGBD2-201ENST00000329291 PCF11O94913 1555 aaKnown RBP24■■□□□ 1.43
PGBD2-201ENST00000329291 MAP3K1Q13233 1512 aa23.99■■□□□ 1.43
PGBD2-201ENST00000329291 SAMD9Q5K651 1589 aa23.98■■□□□ 1.43
PGBD2-201ENST00000329291 IQGAP2Q13576 1575 aa23.96■■□□□ 1.43
PGBD2-201ENST00000329291 RRBP1Q9P2E9 1410 aaKnown RBP23.95■■□□□ 1.42
PGBD2-201ENST00000329291 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
PGBD2-201ENST00000329291 LRRC9Q6ZRR7 1453 aa23.94■■□□□ 1.42
PGBD2-201ENST00000329291 FMN1Q68DA7 1419 aa23.94■■□□□ 1.42
PGBD2-201ENST00000329291 CASKIN1Q8WXD9 1431 aa23.94■■□□□ 1.42
PGBD2-201ENST00000329291 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
PGBD2-201ENST00000329291 FYCO1Q9BQS8 1478 aa23.9■■□□□ 1.42
PGBD2-201ENST00000329291 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
PGBD2-201ENST00000329291 KIAA0586Q9BVV6 1533 aa23.88■■□□□ 1.41
PGBD2-201ENST00000329291 CCNB3Q8WWL7 1395 aa23.87■■□□□ 1.41
PGBD2-201ENST00000329291 CFAP43Q8NDM7 1665 aa23.85■■□□□ 1.41
PGBD2-201ENST00000329291 PHLDB1Q86UU1 1377 aa23.84■■□□□ 1.41
PGBD2-201ENST00000329291 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
PGBD2-201ENST00000329291 FBLN2P98095 1184 aa23.82■■□□□ 1.4
PGBD2-201ENST00000329291 ITGAEP38570 1179 aa23.77■■□□□ 1.4
PGBD2-201ENST00000329291 CEP170Q5SW79 1584 aa23.77■■□□□ 1.4
PGBD2-201ENST00000329291 NUP160Q12769 1436 aa23.74■■□□□ 1.39
PGBD2-201ENST00000329291 LRRIQ1Q96JM4 1722 aa23.73■■□□□ 1.39
PGBD2-201ENST00000329291 KIAA0556O60303 1618 aa23.71■■□□□ 1.39
PGBD2-201ENST00000329291 DISP1Q96F81 1524 aa23.69■■□□□ 1.38
PGBD2-201ENST00000329291 FAM50AQ14320 339 aaKnown RBP23.67■■□□□ 1.38
PGBD2-201ENST00000329291 MTUS2Q5JR59 1369 aa23.66■■□□□ 1.38
PGBD2-201ENST00000329291 HECW1Q76N89 1606 aa23.65■■□□□ 1.38
PGBD2-201ENST00000329291 CCDC18Q5T9S5 1454 aa23.64■■□□□ 1.37
PGBD2-201ENST00000329291 DHX57Q6P158 1386 aaKnown RBP23.63■■□□□ 1.37
PGBD2-201ENST00000329291 JPH4Q96JJ6 628 aa23.61■■□□□ 1.37
PGBD2-201ENST00000329291 CARMIL2Q6F5E8 1435 aa23.6■■□□□ 1.37
PGBD2-201ENST00000329291 MAGI3Q5TCQ9 1506 aa23.6■■□□□ 1.37
PGBD2-201ENST00000329291 ARID3CA6NKF2 412 aa23.59■■□□□ 1.37
PGBD2-201ENST00000329291 CHD1O14646 1710 aa23.58■■□□□ 1.36
PGBD2-201ENST00000329291 EPRSP07814 1512 aaKnown RBP23.56■■□□□ 1.36
PGBD2-201ENST00000329291 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
PGBD2-201ENST00000329291 FGD6Q6ZV73 1430 aa23.55■■□□□ 1.36
PGBD2-201ENST00000329291 EHBP1L1Q8N3D4 1523 aa23.55■■□□□ 1.36
PGBD2-201ENST00000329291 RAB3GAP2Q9H2M9 1393 aa23.54■■□□□ 1.36
PGBD2-201ENST00000329291 CDK13Q14004 1512 aaKnown RBP23.54■■□□□ 1.36
PGBD2-201ENST00000329291 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.51■■□□□ 1.35
PGBD2-201ENST00000329291 RAPGEF6Q8TEU7 1601 aa23.51■■□□□ 1.35
PGBD2-201ENST00000329291 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
PGBD2-201ENST00000329291 SUPT6HQ7KZ85 1726 aaKnown RBP23.49■■□□□ 1.35
PGBD2-201ENST00000329291 MYOM3Q5VTT5 1437 aa23.48■■□□□ 1.35
PGBD2-201ENST00000329291 ARHGEF11O15085 1522 aa23.47■■□□□ 1.35
PGBD2-201ENST00000329291 CLSPNQ9HAW4 1339 aa23.47■■□□□ 1.35
PGBD2-201ENST00000329291 NUP153P49790 1475 aaKnown RBP23.45■■□□□ 1.35
PGBD2-201ENST00000329291 PTPRKQ15262 1439 aa23.44■■□□□ 1.34
PGBD2-201ENST00000329291 PRG4Q92954 1404 aaPredicted RBP23.43■■□□□ 1.34
PGBD2-201ENST00000329291 PLB1Q6P1J6 1458 aa23.41■■□□□ 1.34
PGBD2-201ENST00000329291 CDK11AQ9UQ88 783 aaPredicted RBP23.38■■□□□ 1.33
PGBD2-201ENST00000329291 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
PGBD2-201ENST00000329291 ABCA8O94911 1581 aa23.34■■□□□ 1.33
PGBD2-201ENST00000329291 PTPN23Q9H3S7 1636 aa23.34■■□□□ 1.33
PGBD2-201ENST00000329291 ZNF316A6NFI3 1004 aaPredicted RBP23.34■■□□□ 1.33
PGBD2-201ENST00000329291 MAPKBP1O60336 1514 aa23.33■■□□□ 1.32
PGBD2-201ENST00000329291 PTPRGP23470 1445 aa23.33■■□□□ 1.32
PGBD2-201ENST00000329291 TCOF1Q13428 1488 aaKnown RBP23.3■■□□□ 1.32
PGBD2-201ENST00000329291 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
PGBD2-201ENST00000329291 DIEXFQ68CQ4 756 aaKnown RBP23.27■■□□□ 1.32
PGBD2-201ENST00000329291 TROQ12816 1431 aaPredicted RBP23.26■■□□□ 1.31
PGBD2-201ENST00000329291 HFM1A2PYH4 1435 aa23.26■■□□□ 1.31
PGBD2-201ENST00000329291 MIA2Q96PC5 1412 aa23.26■■□□□ 1.31
PGBD2-201ENST00000329291 CHIC2Q9UKJ5 165 aa23.24■■□□□ 1.31
PGBD2-201ENST00000329291 NAIPQ13075 1403 aa23.24■■□□□ 1.31
PGBD2-201ENST00000329291 ZNF644Q9H582 1327 aaPredicted RBP23.22■■□□□ 1.31
PGBD2-201ENST00000329291 SIN3AQ96ST3 1273 aa23.21■■□□□ 1.31
PGBD2-201ENST00000329291 ATP10BO94823 1461 aa23.21■■□□□ 1.31
PGBD2-201ENST00000329291 RRP7BPQ9NSQ0 103 aa23.21■■□□□ 1.31
PGBD2-201ENST00000329291 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
PGBD2-201ENST00000329291 UACAQ9BZF9 1416 aa23.19■■□□□ 1.3
PGBD2-201ENST00000329291 ADCY10Q96PN6 1610 aa23.18■■□□□ 1.3
PGBD2-201ENST00000329291 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
PGBD2-201ENST00000329291 NEUROD1Q13562 356 aa23.14■■□□□ 1.3
PGBD2-201ENST00000329291 KIF14Q15058 1648 aa23.13■■□□□ 1.29
PGBD2-201ENST00000329291 GPATCH8Q9UKJ3 1502 aaKnown RBP23.11■■□□□ 1.29
PGBD2-201ENST00000329291 ITSN2Q9NZM3 1697 aa23.11■■□□□ 1.29
PGBD2-201ENST00000329291 ABCC2Q92887 1545 aa23.1■■□□□ 1.29
PGBD2-201ENST00000329291 ABCC5O15440 1437 aa23.09■■□□□ 1.29
PGBD2-201ENST00000329291 CFDP1Q9UEE9 299 aaPredicted RBP23.09■■□□□ 1.29
PGBD2-201ENST00000329291 DAPK1P53355 1430 aa23.08■■□□□ 1.29
PGBD2-201ENST00000329291 KDM6BO15054 1643 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms