RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 CSRNP3Q8WYN3 585 aa7.14□□□□□ -1.27
SDR42E1-201ENST00000328945 C14orf37Q86TY3 774 aa7.13□□□□□ -1.27
SDR42E1-201ENST00000328945 TONSLQ96HA7 1378 aa7.12□□□□□ -1.27
SDR42E1-201ENST00000328945 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.11□□□□□ -1.27
SDR42E1-201ENST00000328945 ZBTB7CA1YPR0 619 aa7.11□□□□□ -1.27
SDR42E1-201ENST00000328945 GOLGA6L22H0YM25 854 aa7.1□□□□□ -1.27
SDR42E1-201ENST00000328945 NACADO15069 1562 aa7.1□□□□□ -1.27
SDR42E1-201ENST00000328945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.09□□□□□ -1.27
SDR42E1-201ENST00000328945 LAS1LQ9Y4W2 734 aaKnown RBP7.09□□□□□ -1.28
SDR42E1-201ENST00000328945 DDX10Q13206 875 aaKnown RBP7.08□□□□□ -1.28
SDR42E1-201ENST00000328945 L1TD1Q5T7N2 865 aaKnown RBP7.08□□□□□ -1.28
SDR42E1-201ENST00000328945 ARID4BQ4LE39 1312 aaPredicted RBP7.08□□□□□ -1.28
SDR42E1-201ENST00000328945 IRX6P78412 446 aaPredicted RBP7.08□□□□□ -1.28
SDR42E1-201ENST00000328945 FAM9BQ8IZU0 186 aa7.08□□□□□ -1.28
SDR42E1-201ENST00000328945 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.07□□□□□ -1.28
SDR42E1-201ENST00000328945 RSPH6AQ9H0K4 717 aa7.07□□□□□ -1.28
SDR42E1-201ENST00000328945 PTMAP06454 111 aaKnown RBP7.07□□□□□ -1.28
SDR42E1-201ENST00000328945 RBM19Q9Y4C8 960 aaKnown RBP7.06□□□□□ -1.28
SDR42E1-201ENST00000328945 PPP4R2Q9NY27 417 aa7.06□□□□□ -1.28
SDR42E1-201ENST00000328945 MRS2Q9HD23 443 aa7.05□□□□□ -1.28
SDR42E1-201ENST00000328945 HAP1P54257 671 aaPredicted RBP7.04□□□□□ -1.28
SDR42E1-201ENST00000328945 DNTTIP2Q5QJE6 756 aaKnown RBP7.04□□□□□ -1.28
SDR42E1-201ENST00000328945 PPP1R15AO75807 674 aaPredicted RBP7.03□□□□□ -1.28
SDR42E1-201ENST00000328945 TRHP20396 242 aaPredicted RBP7.02□□□□□ -1.29
SDR42E1-201ENST00000328945 PNNQ9H307 717 aaKnown RBP7.02□□□□□ -1.29
SDR42E1-201ENST00000328945 CHAF1AQ13111 956 aaPredicted RBP7.02□□□□□ -1.29
SDR42E1-201ENST00000328945 CHMP7Q8WUX9 453 aaPredicted RBP7.01□□□□□ -1.29
SDR42E1-201ENST00000328945 PRKCSHP14314 528 aaPredicted RBP7.01□□□□□ -1.29
SDR42E1-201ENST00000328945 TSHZ2Q9NRE2 1034 aa7.01□□□□□ -1.29
SDR42E1-201ENST00000328945 MSNP26038 577 aaKnown RBP7□□□□□ -1.29
SDR42E1-201ENST00000328945 HSP90AA2PQ14568 343 aaPredicted RBP7□□□□□ -1.29
SDR42E1-201ENST00000328945 TMC1Q8TDI8 760 aa6.99□□□□□ -1.29
SDR42E1-201ENST00000328945 KCNH8Q96L42 1107 aa6.99□□□□□ -1.29
SDR42E1-201ENST00000328945 RB1CC1Q8TDY2 1594 aa6.99□□□□□ -1.29
SDR42E1-201ENST00000328945 ERCC6Q03468 1493 aa6.98□□□□□ -1.29
SDR42E1-201ENST00000328945 MYH16Q9H6N6 1097 aa6.97□□□□□ -1.29
SDR42E1-201ENST00000328945 KDM2AQ9Y2K7 1162 aa6.96□□□□□ -1.3
SDR42E1-201ENST00000328945 VSIG10Q8N0Z9 540 aa6.96□□□□□ -1.3
SDR42E1-201ENST00000328945 AMER1Q5JTC6 1135 aaPredicted RBP6.96□□□□□ -1.3
SDR42E1-201ENST00000328945 GOLGA6L6A8MZA4 724 aa6.96□□□□□ -1.3
SDR42E1-201ENST00000328945 CHIC2Q9UKJ5 165 aa6.96□□□□□ -1.3
SDR42E1-201ENST00000328945 PKNOX2Q96KN3 472 aa6.96□□□□□ -1.3
SDR42E1-201ENST00000328945 USP35Q9P2H5 1018 aa6.96□□□□□ -1.3
SDR42E1-201ENST00000328945 TULP1O00294 542 aaPredicted RBP6.95□□□□□ -1.3
SDR42E1-201ENST00000328945 NPHP1O15259 732 aa6.95□□□□□ -1.3
SDR42E1-201ENST00000328945 LMOD2Q6P5Q4 547 aa6.95□□□□□ -1.3
SDR42E1-201ENST00000328945 PTMSP20962 102 aa6.94□□□□□ -1.3
SDR42E1-201ENST00000328945 WDR43Q15061 677 aaKnown RBP eCLIP6.94□□□□□ -1.3
SDR42E1-201ENST00000328945 TNNT3P45378 269 aaPredicted RBP6.94□□□□□ -1.3
SDR42E1-201ENST00000328945 IPO9Q96P70 1041 aaKnown RBP6.93□□□□□ -1.3
SDR42E1-201ENST00000328945 SALL2Q9Y467 1007 aaPredicted RBP6.93□□□□□ -1.3
SDR42E1-201ENST00000328945 ZRSR1Q15695 479 aaKnown RBP6.92□□□□□ -1.3
SDR42E1-201ENST00000328945 NRDCO43847 1150 aa6.92□□□□□ -1.3
SDR42E1-201ENST00000328945 CASC1Q6TDU7 716 aa6.91□□□□□ -1.3
SDR42E1-201ENST00000328945 FANCIQ9NVI1 1328 aa6.9□□□□□ -1.3
SDR42E1-201ENST00000328945 GOLGA6L3A6NEY3 463 aa6.9□□□□□ -1.3
SDR42E1-201ENST00000328945 HSCBQ8IWL3 235 aa6.9□□□□□ -1.3
SDR42E1-201ENST00000328945 CLIP1P30622 1438 aa6.9□□□□□ -1.3
SDR42E1-201ENST00000328945 CCER2I3L3R5 266 aa6.9□□□□□ -1.31
SDR42E1-201ENST00000328945 B4GALNT3Q6L9W6 998 aa6.9□□□□□ -1.31
SDR42E1-201ENST00000328945 TSPY4P0CV99 314 aa6.9□□□□□ -1.31
SDR42E1-201ENST00000328945 TSPY10P0CW01 314 aa6.9□□□□□ -1.31
SDR42E1-201ENST00000328945 EIF4G2P78344 907 aaKnown RBP eCLIP6.89□□□□□ -1.31
SDR42E1-201ENST00000328945 KIAA2012Q0VF49 1180 aa6.89□□□□□ -1.31
SDR42E1-201ENST00000328945 RGS3P49796 1198 aa6.88□□□□□ -1.31
SDR42E1-201ENST00000328945 ARID3AQ99856 593 aa6.88□□□□□ -1.31
SDR42E1-201ENST00000328945 CEP162Q5TB80 1403 aa6.88□□□□□ -1.31
SDR42E1-201ENST00000328945 HSP90AB1P08238 724 aaKnown RBP6.88□□□□□ -1.31
SDR42E1-201ENST00000328945 GBP4Q96PP9 640 aa6.87□□□□□ -1.31
SDR42E1-201ENST00000328945 PODXL2Q9NZ53 605 aa6.87□□□□□ -1.31
SDR42E1-201ENST00000328945 MLECQ14165 292 aa6.87□□□□□ -1.31
SDR42E1-201ENST00000328945 TCERG1O14776 1098 aaKnown RBP6.87□□□□□ -1.31
SDR42E1-201ENST00000328945 GSE1Q14687 1217 aa6.86□□□□□ -1.31
SDR42E1-201ENST00000328945 EEA1Q15075 1411 aa6.85□□□□□ -1.31
SDR42E1-201ENST00000328945 MTUS2Q5JR59 1369 aa6.84□□□□□ -1.31
SDR42E1-201ENST00000328945 FTSJ3Q8IY81 847 aaKnown RBP6.84□□□□□ -1.31
SDR42E1-201ENST00000328945 GOLGA3Q08378 1498 aa6.83□□□□□ -1.32
SDR42E1-201ENST00000328945 NCBP3Q53F19 620 aaKnown RBP6.83□□□□□ -1.32
SDR42E1-201ENST00000328945 PLCB2Q00722 1185 aa6.83□□□□□ -1.32
SDR42E1-201ENST00000328945 A0A0U1RQG5 324 aaPredicted RBP6.83□□□□□ -1.32
SDR42E1-201ENST00000328945 RRP7BPQ9NSQ0 103 aa6.83□□□□□ -1.32
SDR42E1-201ENST00000328945 HIRIP3Q9BW71 556 aaPredicted RBP6.83□□□□□ -1.32
SDR42E1-201ENST00000328945 TAOK2Q9UL54 1235 aa6.82□□□□□ -1.32
SDR42E1-201ENST00000328945 SYAP1Q96A49 352 aaPredicted RBP6.82□□□□□ -1.32
SDR42E1-201ENST00000328945 PLEKHD1A6NEE1 506 aa6.82□□□□□ -1.32
SDR42E1-201ENST00000328945 RGL3Q3MIN7 710 aa6.82□□□□□ -1.32
SDR42E1-201ENST00000328945 GZF1Q9H116 711 aaPredicted RBP6.82□□□□□ -1.32
SDR42E1-201ENST00000328945 DRC7Q8IY82 874 aa6.81□□□□□ -1.32
SDR42E1-201ENST00000328945 CHMP4BQ9H444 224 aaKnown RBP6.81□□□□□ -1.32
SDR42E1-201ENST00000328945 POGKQ9P215 609 aa6.81□□□□□ -1.32
SDR42E1-201ENST00000328945 DDX11L8A8MPP1 907 aa6.81□□□□□ -1.32
SDR42E1-201ENST00000328945 AEBP2Q6ZN18 517 aaPredicted RBP6.81□□□□□ -1.32
SDR42E1-201ENST00000328945 TIMELESSQ9UNS1 1208 aa6.8□□□□□ -1.32
SDR42E1-201ENST00000328945 MTERF4Q7Z6M4 381 aaKnown RBP6.8□□□□□ -1.32
SDR42E1-201ENST00000328945 SETQ01105 290 aaPredicted RBP6.8□□□□□ -1.32
SDR42E1-201ENST00000328945 SLKQ9H2G2 1235 aaPredicted RBP6.8□□□□□ -1.32
SDR42E1-201ENST00000328945 MS4A1P11836 297 aa6.8□□□□□ -1.32
SDR42E1-201ENST00000328945 EIF4G1Q04637 1599 aaKnown RBP6.8□□□□□ -1.32
SDR42E1-201ENST00000328945 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.8□□□□□ -1.32
SDR42E1-201ENST00000328945 ANO8Q9HCE9 1232 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms