RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SOGA1O94964 1423 aa15.55■□□□□ 0.08
COL4A5-201ENST00000328300 CANXP27824 592 aaKnown RBP15.53■□□□□ 0.08
COL4A5-201ENST00000328300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.08
COL4A5-201ENST00000328300 WIZO95785 1651 aa15.52■□□□□ 0.08
COL4A5-201ENST00000328300 CCNB3Q8WWL7 1395 aa15.52■□□□□ 0.07
COL4A5-201ENST00000328300 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
COL4A5-201ENST00000328300 GTF3C3Q9Y5Q9 886 aa15.51■□□□□ 0.07
COL4A5-201ENST00000328300 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
COL4A5-201ENST00000328300 VPS8Q8N3P4 1428 aa15.5■□□□□ 0.07
COL4A5-201ENST00000328300 KCNH8Q96L42 1107 aa15.47■□□□□ 0.07
COL4A5-201ENST00000328300 CDCA8Q53HL2 280 aa15.47■□□□□ 0.07
COL4A5-201ENST00000328300 EIF4G2P78344 907 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL4A5-201ENST00000328300 TIMELESSQ9UNS1 1208 aa15.45■□□□□ 0.06
COL4A5-201ENST00000328300 SLC24A1O60721 1099 aa15.45■□□□□ 0.06
COL4A5-201ENST00000328300 RAPGEF2Q9Y4G8 1499 aa15.44■□□□□ 0.06
COL4A5-201ENST00000328300 RRP7BPQ9NSQ0 103 aa15.43■□□□□ 0.06
COL4A5-201ENST00000328300 ARHGAP35Q9NRY4 1499 aa15.41■□□□□ 0.06
COL4A5-201ENST00000328300 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
COL4A5-201ENST00000328300 KANK1Q14678 1352 aa15.4■□□□□ 0.06
COL4A5-201ENST00000328300 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.37■□□□□ 0.05
COL4A5-201ENST00000328300 FANCD2Q9BXW9 1451 aa15.37■□□□□ 0.05
COL4A5-201ENST00000328300 PPP1R15AO75807 674 aaPredicted RBP15.36■□□□□ 0.05
COL4A5-201ENST00000328300 TMC1Q8TDI8 760 aa15.35■□□□□ 0.05
COL4A5-201ENST00000328300 WDR43Q15061 677 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL4A5-201ENST00000328300 DDX10Q13206 875 aaKnown RBP15.34■□□□□ 0.05
COL4A5-201ENST00000328300 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
COL4A5-201ENST00000328300 TDRD9Q8NDG6 1382 aaKnown RBP15.32■□□□□ 0.04
COL4A5-201ENST00000328300 RSPH4AQ5TD94 716 aa15.3■□□□□ 0.04
COL4A5-201ENST00000328300 HDGFP51858 240 aaKnown RBP15.3■□□□□ 0.04
COL4A5-201ENST00000328300 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.04
COL4A5-201ENST00000328300 SETD5Q9C0A6 1442 aa15.28■□□□□ 0.04
COL4A5-201ENST00000328300 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.03
COL4A5-201ENST00000328300 MRS2Q9HD23 443 aa15.25■□□□□ 0.03
COL4A5-201ENST00000328300 CFAP53Q96M91 514 aa15.25■□□□□ 0.03
COL4A5-201ENST00000328300 EFCAB2Q5VUJ9 269 aa15.24■□□□□ 0.03
COL4A5-201ENST00000328300 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
COL4A5-201ENST00000328300 ANKRD30AQ9BXX3 1397 aa15.23■□□□□ 0.03
COL4A5-201ENST00000328300 FAM9BQ8IZU0 186 aa15.22■□□□□ 0.03
COL4A5-201ENST00000328300 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
COL4A5-201ENST00000328300 CARD11Q9BXL7 1154 aa15.21■□□□□ 0.03
COL4A5-201ENST00000328300 ANP32AP39687 249 aaKnown RBP15.21■□□□□ 0.03
COL4A5-201ENST00000328300 KNSTRNQ9Y448 316 aa15.18■□□□□ 0.02
COL4A5-201ENST00000328300 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
COL4A5-201ENST00000328300 UPF2Q9HAU5 1272 aaKnown RBP15.18■□□□□ 0.02
COL4A5-201ENST00000328300 FGD5Q6ZNL6 1462 aa15.15■□□□□ 0.02
COL4A5-201ENST00000328300 RGL3Q3MIN7 710 aa15.15■□□□□ 0.02
COL4A5-201ENST00000328300 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
COL4A5-201ENST00000328300 JPH4Q96JJ6 628 aa15.12■□□□□ 0.01
COL4A5-201ENST00000328300 FHOD3Q2V2M9 1422 aa15.11■□□□□ 0.01
COL4A5-201ENST00000328300 CFTRP13569 1480 aa15.11■□□□□ 0.01
COL4A5-201ENST00000328300 TMF1P82094 1093 aa15.11■□□□□ 0.01
COL4A5-201ENST00000328300 PNNQ9H307 717 aaKnown RBP15.11■□□□□ 0.01
COL4A5-201ENST00000328300 EIF5BO60841 1220 aaKnown RBP15.1■□□□□ 0.01
COL4A5-201ENST00000328300 NUDCQ9Y266 331 aa15.1■□□□□ 0.01
COL4A5-201ENST00000328300 POGKQ9P215 609 aa15.1■□□□□ 0.01
COL4A5-201ENST00000328300 C14orf37Q86TY3 774 aa15.1■□□□□ 0.01
COL4A5-201ENST00000328300 FKBP8Q14318 412 aa15.09■□□□□ 0.01
COL4A5-201ENST00000328300 MYH16Q9H6N6 1097 aa15.09■□□□□ 0.01
COL4A5-201ENST00000328300 PTPRGP23470 1445 aa15.07■□□□□ 0
COL4A5-201ENST00000328300 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
COL4A5-201ENST00000328300 IGF1RP08069 1367 aa15.05■□□□□ 0
COL4A5-201ENST00000328300 KANK4Q5T7N3 995 aaPredicted RBP15.05■□□□□ 0
COL4A5-201ENST00000328300 CCDC136Q96JN2 1154 aa15.05■□□□□ 0
COL4A5-201ENST00000328300 EIF3AQ14152 1382 aaKnown RBP15.05■□□□□ -0
COL4A5-201ENST00000328300 CHMP4BQ9H444 224 aaKnown RBP15.04■□□□□ -0
COL4A5-201ENST00000328300 CUX1P39880 1505 aa15.03■□□□□ -0
COL4A5-201ENST00000328300 GRIN2BQ13224 1484 aa15.03■□□□□ -0
COL4A5-201ENST00000328300 MRC2Q9UBG0 1479 aa15.03■□□□□ -0
COL4A5-201ENST00000328300 NPM2Q86SE8 214 aaKnown RBP15.03■□□□□ -0
COL4A5-201ENST00000328300 PKD2Q13563 968 aa15.02■□□□□ -0
COL4A5-201ENST00000328300 MIER1Q8N108 512 aa15.02■□□□□ -0
COL4A5-201ENST00000328300 NUP155O75694 1391 aa15.02□□□□□ -0.01
COL4A5-201ENST00000328300 RAB3GAP2Q9H2M9 1393 aa15.02□□□□□ -0.01
COL4A5-201ENST00000328300 DCAF11Q8TEB1 546 aa15.02□□□□□ -0.01
COL4A5-201ENST00000328300 IFT140Q96RY7 1462 aa15.02□□□□□ -0.01
COL4A5-201ENST00000328300 KIF21BO75037 1637 aa15.01□□□□□ -0.01
COL4A5-201ENST00000328300 SPAG9O60271 1321 aaKnown RBP15.01□□□□□ -0.01
COL4A5-201ENST00000328300 MAPK8IP3Q9UPT6 1336 aa15.01□□□□□ -0.01
COL4A5-201ENST00000328300 SIN3AQ96ST3 1273 aa15□□□□□ -0.01
COL4A5-201ENST00000328300 MS4A1P11836 297 aa15□□□□□ -0.01
COL4A5-201ENST00000328300 MPHOSPH9Q99550 1183 aa15□□□□□ -0.01
COL4A5-201ENST00000328300 CCER2I3L3R5 266 aa14.99□□□□□ -0.01
COL4A5-201ENST00000328300 UACAQ9BZF9 1416 aa14.98□□□□□ -0.01
COL4A5-201ENST00000328300 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
COL4A5-201ENST00000328300 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
COL4A5-201ENST00000328300 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
COL4A5-201ENST00000328300 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
COL4A5-201ENST00000328300 EFCAB5A4FU69 1503 aa14.96□□□□□ -0.02
COL4A5-201ENST00000328300 HSP90AA1P07900 732 aaKnown RBP14.95□□□□□ -0.02
COL4A5-201ENST00000328300 HAP1P54257 671 aaPredicted RBP14.95□□□□□ -0.02
COL4A5-201ENST00000328300 SALL2Q9Y467 1007 aaPredicted RBP14.94□□□□□ -0.02
COL4A5-201ENST00000328300 RAD54L2Q9Y4B4 1467 aa14.94□□□□□ -0.02
COL4A5-201ENST00000328300 ROCK2O75116 1388 aaKnown RBP14.94□□□□□ -0.02
COL4A5-201ENST00000328300 GGT6Q6P531 493 aa14.94□□□□□ -0.02
COL4A5-201ENST00000328300 HIRIP3Q9BW71 556 aaPredicted RBP14.93□□□□□ -0.02
COL4A5-201ENST00000328300 MYOM3Q5VTT5 1437 aa14.93□□□□□ -0.02
COL4A5-201ENST00000328300 TOP2BQ02880 1626 aa14.93□□□□□ -0.02
COL4A5-201ENST00000328300 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
COL4A5-201ENST00000328300 CASKIN1Q8WXD9 1431 aa14.92□□□□□ -0.02
COL4A5-201ENST00000328300 HDGFL2Q7Z4V5 671 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms