RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 MAPKBP1O60336 1514 aa20.05■□□□□ 0.8
CHRNA3-201ENST00000326828 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
CHRNA3-201ENST00000326828 SETD5Q9C0A6 1442 aa20.04■□□□□ 0.8
CHRNA3-201ENST00000326828 CNGB1Q14028 1251 aaPredicted RBP20■□□□□ 0.79
CHRNA3-201ENST00000326828 ARHGAP35Q9NRY4 1499 aa20■□□□□ 0.79
CHRNA3-201ENST00000326828 CDK11AQ9UQ88 783 aaPredicted RBP19.99■□□□□ 0.79
CHRNA3-201ENST00000326828 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
CHRNA3-201ENST00000326828 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
CHRNA3-201ENST00000326828 PHLDB1Q86UU1 1377 aa19.97■□□□□ 0.79
CHRNA3-201ENST00000326828 BICRAQ9NZM4 1560 aa19.95■□□□□ 0.78
CHRNA3-201ENST00000326828 CCER2I3L3R5 266 aa19.94■□□□□ 0.78
CHRNA3-201ENST00000326828 CUX2O14529 1486 aa19.93■□□□□ 0.78
CHRNA3-201ENST00000326828 TONSLQ96HA7 1378 aa19.93■□□□□ 0.78
CHRNA3-201ENST00000326828 ERICH3Q5RHP9 1530 aa19.93■□□□□ 0.78
CHRNA3-201ENST00000326828 SENP3-EIF4A1A0A087X0R7 540 aa19.89■□□□□ 0.78
CHRNA3-201ENST00000326828 FAM9BQ8IZU0 186 aa19.86■□□□□ 0.77
CHRNA3-201ENST00000326828 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
CHRNA3-201ENST00000326828 B4GALNT3Q6L9W6 998 aa19.86■□□□□ 0.77
CHRNA3-201ENST00000326828 CUX1P39880 1505 aa19.85■□□□□ 0.77
CHRNA3-201ENST00000326828 NBR1Q14596 966 aa19.83■□□□□ 0.76
CHRNA3-201ENST00000326828 CCDC184Q52MB2 194 aa19.81■□□□□ 0.76
CHRNA3-201ENST00000326828 LRRC9Q6ZRR7 1453 aa19.8■□□□□ 0.76
CHRNA3-201ENST00000326828 TIAM1Q13009 1591 aa19.77■□□□□ 0.76
CHRNA3-201ENST00000326828 CHIC2Q9UKJ5 165 aa19.77■□□□□ 0.75
CHRNA3-201ENST00000326828 IGF1RP08069 1367 aa19.76■□□□□ 0.75
CHRNA3-201ENST00000326828 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
CHRNA3-201ENST00000326828 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
CHRNA3-201ENST00000326828 FANCIQ9NVI1 1328 aa19.74■□□□□ 0.75
CHRNA3-201ENST00000326828 TIMELESSQ9UNS1 1208 aa19.73■□□□□ 0.75
CHRNA3-201ENST00000326828 FHOD3Q2V2M9 1422 aa19.73■□□□□ 0.75
CHRNA3-201ENST00000326828 HSPA5P11021 654 aaKnown RBP19.72■□□□□ 0.75
CHRNA3-201ENST00000326828 POLR3GLQ9BT43 218 aa19.72■□□□□ 0.75
CHRNA3-201ENST00000326828 RRP7BPQ9NSQ0 103 aa19.72■□□□□ 0.75
CHRNA3-201ENST00000326828 DEKP35659 375 aaKnown RBP19.71■□□□□ 0.75
CHRNA3-201ENST00000326828 MRS2Q9HD23 443 aa19.69■□□□□ 0.74
CHRNA3-201ENST00000326828 PPP4R2Q9NY27 417 aa19.69■□□□□ 0.74
CHRNA3-201ENST00000326828 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
CHRNA3-201ENST00000326828 FOXD1Q16676 465 aa19.67■□□□□ 0.74
CHRNA3-201ENST00000326828 ARID3CA6NKF2 412 aa19.66■□□□□ 0.74
CHRNA3-201ENST00000326828 PAK3O75914 559 aaPredicted RBP19.62■□□□□ 0.73
CHRNA3-201ENST00000326828 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
CHRNA3-201ENST00000326828 MTUS2Q5JR59 1369 aa19.61■□□□□ 0.73
CHRNA3-201ENST00000326828 CCDC18Q5T9S5 1454 aa19.61■□□□□ 0.73
CHRNA3-201ENST00000326828 EIF4G2P78344 907 aaKnown RBP eCLIP19.59■□□□□ 0.73
CHRNA3-201ENST00000326828 C11orf95C9JLR9 678 aaPredicted RBP19.59■□□□□ 0.73
CHRNA3-201ENST00000326828 PCF11O94913 1555 aaKnown RBP19.58■□□□□ 0.73
CHRNA3-201ENST00000326828 PTPRKQ15262 1439 aa19.57■□□□□ 0.72
CHRNA3-201ENST00000326828 NOP58Q9Y2X3 529 aaKnown RBP19.56■□□□□ 0.72
CHRNA3-201ENST00000326828 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.72
CHRNA3-201ENST00000326828 PRKRIP1Q9H875 184 aaPredicted RBP19.53■□□□□ 0.72
CHRNA3-201ENST00000326828 FGD6Q6ZV73 1430 aa19.53■□□□□ 0.72
CHRNA3-201ENST00000326828 ZNF326Q5BKZ1 582 aaKnown RBP19.52■□□□□ 0.72
CHRNA3-201ENST00000326828 NPM2Q86SE8 214 aaKnown RBP19.51■□□□□ 0.71
CHRNA3-201ENST00000326828 L3MBTL2Q969R5 705 aa19.51■□□□□ 0.71
CHRNA3-201ENST00000326828 CCDC136Q96JN2 1154 aa19.5■□□□□ 0.71
CHRNA3-201ENST00000326828 CFTRP13569 1480 aa19.5■□□□□ 0.71
CHRNA3-201ENST00000326828 FGD5Q6ZNL6 1462 aa19.5■□□□□ 0.71
CHRNA3-201ENST00000326828 UACAQ9BZF9 1416 aa19.49■□□□□ 0.71
CHRNA3-201ENST00000326828 MAP3K1Q13233 1512 aa19.49■□□□□ 0.71
CHRNA3-201ENST00000326828 AKNAQ7Z591 1439 aa19.45■□□□□ 0.7
CHRNA3-201ENST00000326828 RTN4Q9NQC3 1192 aaKnown RBP19.45■□□□□ 0.7
CHRNA3-201ENST00000326828 SALL2Q9Y467 1007 aaPredicted RBP19.45■□□□□ 0.7
CHRNA3-201ENST00000326828 RTL5Q5HYW3 569 aaPredicted RBP19.44■□□□□ 0.7
CHRNA3-201ENST00000326828 ANP32AP39687 249 aaKnown RBP19.44■□□□□ 0.7
CHRNA3-201ENST00000326828 NAIPQ13075 1403 aa19.43■□□□□ 0.7
CHRNA3-201ENST00000326828 HFM1A2PYH4 1435 aa19.42■□□□□ 0.7
CHRNA3-201ENST00000326828 RAD54L2Q9Y4B4 1467 aa19.42■□□□□ 0.7
CHRNA3-201ENST00000326828 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
CHRNA3-201ENST00000326828 ZBED9Q6R2W3 1325 aa19.41■□□□□ 0.7
CHRNA3-201ENST00000326828 ERICH6BQ5W0A0 696 aa19.41■□□□□ 0.7
CHRNA3-201ENST00000326828 CNTLNQ9NXG0 1405 aa19.41■□□□□ 0.7
CHRNA3-201ENST00000326828 MPHOSPH9Q99550 1183 aa19.4■□□□□ 0.7
CHRNA3-201ENST00000326828 ZBTB47Q9UFB7 747 aaPredicted RBP19.4■□□□□ 0.7
CHRNA3-201ENST00000326828 NBPF8Q3BBV2 869 aa19.39■□□□□ 0.69
CHRNA3-201ENST00000326828 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
CHRNA3-201ENST00000326828 CASKIN1Q8WXD9 1431 aa19.38■□□□□ 0.69
CHRNA3-201ENST00000326828 CCDC7Q96M83 1385 aa19.38■□□□□ 0.69
CHRNA3-201ENST00000326828 PTPN23Q9H3S7 1636 aa19.37■□□□□ 0.69
CHRNA3-201ENST00000326828 CFAP43Q8NDM7 1665 aa19.37■□□□□ 0.69
CHRNA3-201ENST00000326828 MYT1LQ9UL68 1186 aa19.36■□□□□ 0.69
CHRNA3-201ENST00000326828 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
CHRNA3-201ENST00000326828 LAS1LQ9Y4W2 734 aaKnown RBP19.36■□□□□ 0.69
CHRNA3-201ENST00000326828 ANO8Q9HCE9 1232 aaPredicted RBP19.36■□□□□ 0.69
CHRNA3-201ENST00000326828 KIF7Q2M1P5 1343 aa19.35■□□□□ 0.69
CHRNA3-201ENST00000326828 NCOA2Q15596 1464 aa19.33■□□□□ 0.68
CHRNA3-201ENST00000326828 IPO9Q96P70 1041 aaKnown RBP19.32■□□□□ 0.68
CHRNA3-201ENST00000326828 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
CHRNA3-201ENST00000326828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.31■□□□□ 0.68
CHRNA3-201ENST00000326828 KDM5BQ9UGL1 1544 aa19.31■□□□□ 0.68
CHRNA3-201ENST00000326828 MYOM3Q5VTT5 1437 aa19.3■□□□□ 0.68
CHRNA3-201ENST00000326828 IL27Q8NEV9 243 aa19.3■□□□□ 0.68
CHRNA3-201ENST00000326828 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
CHRNA3-201ENST00000326828 HMGXB3Q12766 1538 aa19.3■□□□□ 0.68
CHRNA3-201ENST00000326828 NUDCQ9Y266 331 aa19.28■□□□□ 0.68
CHRNA3-201ENST00000326828 TMC1Q8TDI8 760 aa19.27■□□□□ 0.68
CHRNA3-201ENST00000326828 TDRD9Q8NDG6 1382 aaKnown RBP19.26■□□□□ 0.67
CHRNA3-201ENST00000326828 PRKCSHP14314 528 aaPredicted RBP19.24■□□□□ 0.67
CHRNA3-201ENST00000326828 DNAJC5BQ9UF47 199 aa19.24■□□□□ 0.67
CHRNA3-201ENST00000326828 NCOA1Q15788 1441 aa19.24■□□□□ 0.67
CHRNA3-201ENST00000326828 SKAP1Q86WV1 359 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms