RNA–Protein interactions for RNA: ENST00000324941.4

VPS37D-201, Transcript of VPS37D, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37D, Length 1,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37D-201ENST00000324941 ARAP1Q96P48 1450 aa43.71■■■■■ 4.59
VPS37D-201ENST00000324941 SYNJ2O15056 1496 aa43.68■■■■■ 4.58
VPS37D-201ENST00000324941 CHMP7Q8WUX9 453 aaPredicted RBP43.66■■■■■ 4.58
VPS37D-201ENST00000324941 GRIN2AQ12879 1464 aa43.65■■■■■ 4.58
VPS37D-201ENST00000324941 EFCAB5A4FU69 1503 aa43.58■■■■■ 4.57
VPS37D-201ENST00000324941 FBLN2P98095 1184 aa43.55■■■■■ 4.56
VPS37D-201ENST00000324941 IQGAP2Q13576 1575 aa43.49■■■■■ 4.55
VPS37D-201ENST00000324941 APLP2Q06481 763 aa43.47■■■■■ 4.55
VPS37D-201ENST00000324941 PPARGC1BQ86YN6 1023 aaKnown RBP43.46■■■■■ 4.55
VPS37D-201ENST00000324941 KIAA0586Q9BVV6 1533 aa43.46■■■■■ 4.55
VPS37D-201ENST00000324941 TRIM26Q12899 539 aaPredicted RBP43.45■■■■■ 4.55
VPS37D-201ENST00000324941 P3H3Q8IVL6 736 aa43.45■■■■■ 4.55
VPS37D-201ENST00000324941 SAMD9Q5K651 1589 aa43.38■■■■■ 4.54
VPS37D-201ENST00000324941 FHOD3Q2V2M9 1422 aa43.36■■■■■ 4.53
VPS37D-201ENST00000324941 PCGF6Q9BYE7 350 aa43.35■■■■■ 4.53
VPS37D-201ENST00000324941 CEP170Q5SW79 1584 aa43.34■■■■■ 4.53
VPS37D-201ENST00000324941 NUP160Q12769 1436 aa43.34■■■■■ 4.53
VPS37D-201ENST00000324941 UGGT2Q9NYU1 1516 aa43.29■■■■■ 4.52
VPS37D-201ENST00000324941 FMN1Q68DA7 1419 aa43.23■■■■■ 4.51
VPS37D-201ENST00000324941 CHD1O14646 1710 aa43.16■■■■■ 4.5
VPS37D-201ENST00000324941 TTBK1Q5TCY1 1321 aaPredicted RBP43.15■■■■■ 4.5
VPS37D-201ENST00000324941 CASKIN1Q8WXD9 1431 aa43.1■■■■■ 4.49
VPS37D-201ENST00000324941 PCF11O94913 1555 aaKnown RBP43.08■■■■■ 4.49
VPS37D-201ENST00000324941 JPH4Q96JJ6 628 aa43.08■■■■■ 4.49
VPS37D-201ENST00000324941 FYCO1Q9BQS8 1478 aa43.07■■■■■ 4.49
VPS37D-201ENST00000324941 DISP1Q96F81 1524 aa43.05■■■■■ 4.48
VPS37D-201ENST00000324941 MAP3K1Q13233 1512 aa43.04■■■■■ 4.48
VPS37D-201ENST00000324941 ATP1B4Q9UN42 357 aaPredicted RBP43.04■■■■■ 4.48
VPS37D-201ENST00000324941 KIAA0556O60303 1618 aa43.03■■■■■ 4.48
VPS37D-201ENST00000324941 CARMIL2Q6F5E8 1435 aa42.98■■■■■ 4.47
VPS37D-201ENST00000324941 TIAM1Q13009 1591 aa42.94■■■■■ 4.47
VPS37D-201ENST00000324941 KANK4Q5T7N3 995 aaPredicted RBP42.94■■■■■ 4.46
VPS37D-201ENST00000324941 CFAP43Q8NDM7 1665 aa42.82■■■■■ 4.45
VPS37D-201ENST00000324941 PRG4Q92954 1404 aaPredicted RBP42.77■■■■■ 4.44
VPS37D-201ENST00000324941 LRRC9Q6ZRR7 1453 aa42.77■■■■■ 4.44
VPS37D-201ENST00000324941 HECW1Q76N89 1606 aa42.74■■■■■ 4.43
VPS37D-201ENST00000324941 SHROOM2Q13796 1616 aa42.72■■■■■ 4.43
VPS37D-201ENST00000324941 CLASP1Q7Z460 1538 aa42.7■■■■■ 4.43
VPS37D-201ENST00000324941 CCDC18Q5T9S5 1454 aa42.69■■■■■ 4.42
VPS37D-201ENST00000324941 LRRIQ1Q96JM4 1722 aa42.63■■■■■ 4.41
VPS37D-201ENST00000324941 RAPGEF6Q8TEU7 1601 aa42.61■■■■■ 4.41
VPS37D-201ENST00000324941 EPRSP07814 1512 aaKnown RBP42.59■■■■■ 4.41
VPS37D-201ENST00000324941 MTUS2Q5JR59 1369 aa42.55■■■■■ 4.4
VPS37D-201ENST00000324941 PTPRGP23470 1445 aa42.54■■■■■ 4.4
VPS37D-201ENST00000324941 PLB1Q6P1J6 1458 aa42.51■■■■■ 4.4
VPS37D-201ENST00000324941 NUP153P49790 1475 aaKnown RBP42.5■■■■■ 4.39
VPS37D-201ENST00000324941 OSCARQ8IYS5 282 aa42.49■■■■■ 4.39
VPS37D-201ENST00000324941 CDK13Q14004 1512 aaKnown RBP42.44■■■■■ 4.38
VPS37D-201ENST00000324941 EHBP1L1Q8N3D4 1523 aa42.43■■■■■ 4.38
VPS37D-201ENST00000324941 ABCA8O94911 1581 aa42.43■■■■■ 4.38
VPS37D-201ENST00000324941 ARID3CA6NKF2 412 aa42.42■■■■■ 4.38
VPS37D-201ENST00000324941 RRBP1Q9P2E9 1410 aaKnown RBP42.42■■■■■ 4.38
VPS37D-201ENST00000324941 ERCC6L2Q5T890 1561 aa42.39■■■■■ 4.38
VPS37D-201ENST00000324941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.37■■■■■ 4.37
VPS37D-201ENST00000324941 HNRNPUL2Q1KMD3 747 aaKnown RBP42.37■■■■■ 4.37
VPS37D-201ENST00000324941 CDK11AQ9UQ88 783 aaPredicted RBP42.36■■■■■ 4.37
VPS37D-201ENST00000324941 PHLDB1Q86UU1 1377 aa42.35■■■■■ 4.37
VPS37D-201ENST00000324941 CCNB3Q8WWL7 1395 aa42.33■■■■■ 4.37
VPS37D-201ENST00000324941 MAGI3Q5TCQ9 1506 aa42.32■■■■■ 4.37
VPS37D-201ENST00000324941 SUPT6HQ7KZ85 1726 aaKnown RBP42.3■■■■■ 4.36
VPS37D-201ENST00000324941 UACAQ9BZF9 1416 aa42.28■■■■■ 4.36
VPS37D-201ENST00000324941 NCOA2Q15596 1464 aa42.26■■■■■ 4.36
VPS37D-201ENST00000324941 ATP10BO94823 1461 aa42.19■■■■■ 4.34
VPS37D-201ENST00000324941 ARHGEF11O15085 1522 aa42.15■■■■■ 4.34
VPS37D-201ENST00000324941 TROQ12816 1431 aaPredicted RBP42.12■■■■■ 4.33
VPS37D-201ENST00000324941 ABCC2Q92887 1545 aa42.11■■■■■ 4.33
VPS37D-201ENST00000324941 MYOM3Q5VTT5 1437 aa42.11■■■■■ 4.33
VPS37D-201ENST00000324941 PLEKHD1A6NEE1 506 aa42.1■■■■■ 4.33
VPS37D-201ENST00000324941 FGD6Q6ZV73 1430 aa42.09■■■■■ 4.33
VPS37D-201ENST00000324941 FAM50AQ14320 339 aaKnown RBP42.07■■■■■ 4.33
VPS37D-201ENST00000324941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP42.05■■■■■ 4.32
VPS37D-201ENST00000324941 UHRF1BP1LA0JNW5 1464 aa42.04■■■■■ 4.32
VPS37D-201ENST00000324941 HRCP23327 699 aa41.97■■■■■ 4.31
VPS37D-201ENST00000324941 ITGAEP38570 1179 aa41.95■■■■■ 4.31
VPS37D-201ENST00000324941 ADCY10Q96PN6 1610 aa41.94■■■■■ 4.3
VPS37D-201ENST00000324941 MIA2Q96PC5 1412 aa41.91■■■■■ 4.3
VPS37D-201ENST00000324941 PTPN23Q9H3S7 1636 aa41.86■■■■■ 4.29
VPS37D-201ENST00000324941 KDM5BQ9UGL1 1544 aa41.85■■■■■ 4.29
VPS37D-201ENST00000324941 KIF14Q15058 1648 aa41.84■■■■■ 4.29
VPS37D-201ENST00000324941 TCOF1Q13428 1488 aaKnown RBP41.81■■■■■ 4.28
VPS37D-201ENST00000324941 ZCCHC11Q5TAX3 1644 aaKnown RBP41.78■■■■■ 4.28
VPS37D-201ENST00000324941 CCER1Q8TC90 406 aaPredicted RBP41.77■■■■■ 4.28
VPS37D-201ENST00000324941 ITSN2Q9NZM3 1697 aa41.73■■■■■ 4.27
VPS37D-201ENST00000324941 GPATCH8Q9UKJ3 1502 aaKnown RBP41.73■■■■■ 4.27
VPS37D-201ENST00000324941 ABCC10Q5T3U5 1492 aa41.72■■■■■ 4.27
VPS37D-201ENST00000324941 CFDP1Q9UEE9 299 aaPredicted RBP41.7■■■■■ 4.27
VPS37D-201ENST00000324941 ZEB1P37275 1124 aaPredicted RBP41.69■■■■■ 4.26
VPS37D-201ENST00000324941 NPM1P06748 294 aaKnown RBP eCLIP41.58■■■■■ 4.25
VPS37D-201ENST00000324941 SETD5Q9C0A6 1442 aa41.57■■■■■ 4.25
VPS37D-201ENST00000324941 KCNH8Q96L42 1107 aa41.57■■■■■ 4.25
VPS37D-201ENST00000324941 CDC42BPAQ5VT25 1732 aa41.56■■■■■ 4.24
VPS37D-201ENST00000324941 PTPRKQ15262 1439 aa41.55■■■■■ 4.24
VPS37D-201ENST00000324941 ZNF644Q9H582 1327 aaPredicted RBP41.54■■■■■ 4.24
VPS37D-201ENST00000324941 ZNF777Q9ULD5 760 aaPredicted RBP41.52■■■■■ 4.24
VPS37D-201ENST00000324941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.51■■■■■ 4.24
VPS37D-201ENST00000324941 CAMSAP2Q08AD1 1489 aa41.51■■■■■ 4.24
VPS37D-201ENST00000324941 RAB3GAP2Q9H2M9 1393 aa41.49■■■■■ 4.23
VPS37D-201ENST00000324941 WDR7Q9Y4E6 1490 aa41.47■■■■■ 4.23
VPS37D-201ENST00000324941 TTC37Q6PGP7 1564 aa41.44■■■■■ 4.23
VPS37D-201ENST00000324941 DAPK1P53355 1430 aa41.44■■■■■ 4.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms