RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 A0A0G2JS52 829 aa12.1□□□□□ -0.47
CD28-201ENST00000324106 KDM2AQ9Y2K7 1162 aa12.1□□□□□ -0.47
CD28-201ENST00000324106 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
CD28-201ENST00000324106 MYT1Q01538 1121 aa12.1□□□□□ -0.47
CD28-201ENST00000324106 HMGXB3Q12766 1538 aa12.09□□□□□ -0.47
CD28-201ENST00000324106 GOLGA3Q08378 1498 aa12.08□□□□□ -0.48
CD28-201ENST00000324106 CC2D2AQ9P2K1 1620 aa12.08□□□□□ -0.48
CD28-201ENST00000324106 CDCA8Q53HL2 280 aa12.08□□□□□ -0.48
CD28-201ENST00000324106 WDR43Q15061 677 aaKnown RBP eCLIP12.07□□□□□ -0.48
CD28-201ENST00000324106 TMC1Q8TDI8 760 aa12.05□□□□□ -0.48
CD28-201ENST00000324106 RRP7BPQ9NSQ0 103 aa12.04□□□□□ -0.48
CD28-201ENST00000324106 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.04□□□□□ -0.48
CD28-201ENST00000324106 CARMIL2Q6F5E8 1435 aa12.02□□□□□ -0.48
CD28-201ENST00000324106 CEP164Q9UPV0 1460 aa12.01□□□□□ -0.49
CD28-201ENST00000324106 ZBTB7CA1YPR0 619 aa12.01□□□□□ -0.49
CD28-201ENST00000324106 KANK1Q14678 1352 aa12□□□□□ -0.49
CD28-201ENST00000324106 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.49
CD28-201ENST00000324106 FHAD1B1AJZ9 1412 aa11.99□□□□□ -0.49
CD28-201ENST00000324106 CFAP53Q96M91 514 aa11.99□□□□□ -0.49
CD28-201ENST00000324106 CCNB3Q8WWL7 1395 aa11.98□□□□□ -0.49
CD28-201ENST00000324106 CARMIL1Q5VZK9 1371 aa11.98□□□□□ -0.49
CD28-201ENST00000324106 RGL3Q3MIN7 710 aa11.97□□□□□ -0.49
CD28-201ENST00000324106 UPF2Q9HAU5 1272 aaKnown RBP11.97□□□□□ -0.49
CD28-201ENST00000324106 POGKQ9P215 609 aa11.97□□□□□ -0.49
CD28-201ENST00000324106 CUX2O14529 1486 aa11.96□□□□□ -0.5
CD28-201ENST00000324106 PLEKHG5O94827 1062 aa11.94□□□□□ -0.5
CD28-201ENST00000324106 MYH16Q9H6N6 1097 aa11.94□□□□□ -0.5
CD28-201ENST00000324106 LMOD2Q6P5Q4 547 aa11.94□□□□□ -0.5
CD28-201ENST00000324106 DDX10Q13206 875 aaKnown RBP11.93□□□□□ -0.5
CD28-201ENST00000324106 PRDM2Q13029 1718 aa11.93□□□□□ -0.5
CD28-201ENST00000324106 TNIKQ9UKE5 1360 aa11.92□□□□□ -0.5
CD28-201ENST00000324106 FAM9BQ8IZU0 186 aa11.92□□□□□ -0.5
CD28-201ENST00000324106 HNRNPUQ00839 825 aaKnown RBP eCLIP11.92□□□□□ -0.5
CD28-201ENST00000324106 CECR2Q9BXF3 1484 aa11.92□□□□□ -0.5
CD28-201ENST00000324106 CEP162Q5TB80 1403 aa11.92□□□□□ -0.5
CD28-201ENST00000324106 HSP90AA1P07900 732 aaKnown RBP11.92□□□□□ -0.5
CD28-201ENST00000324106 MLECQ14165 292 aa11.92□□□□□ -0.5
CD28-201ENST00000324106 EFCAB2Q5VUJ9 269 aa11.91□□□□□ -0.5
CD28-201ENST00000324106 KNSTRNQ9Y448 316 aa11.9□□□□□ -0.51
CD28-201ENST00000324106 SENP3Q9H4L4 574 aaPredicted RBP11.89□□□□□ -0.51
CD28-201ENST00000324106 MRS2Q9HD23 443 aa11.89□□□□□ -0.51
CD28-201ENST00000324106 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
CD28-201ENST00000324106 NUDCQ9Y266 331 aa11.89□□□□□ -0.51
CD28-201ENST00000324106 SOGA1O94964 1423 aa11.89□□□□□ -0.51
CD28-201ENST00000324106 ANP32AP39687 249 aaKnown RBP11.88□□□□□ -0.51
CD28-201ENST00000324106 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
CD28-201ENST00000324106 CARD11Q9BXL7 1154 aa11.86□□□□□ -0.51
CD28-201ENST00000324106 CADPSQ9ULU8 1353 aa11.86□□□□□ -0.51
CD28-201ENST00000324106 GGT6Q6P531 493 aa11.84□□□□□ -0.51
CD28-201ENST00000324106 ARXQ96QS3 562 aa11.84□□□□□ -0.51
CD28-201ENST00000324106 PPM1GO15355 546 aaPredicted RBP11.83□□□□□ -0.52
CD28-201ENST00000324106 NPHP1O15259 732 aa11.83□□□□□ -0.52
CD28-201ENST00000324106 TDRD9Q8NDG6 1382 aaKnown RBP11.83□□□□□ -0.52
CD28-201ENST00000324106 MAPK8IP3Q9UPT6 1336 aa11.82□□□□□ -0.52
CD28-201ENST00000324106 PNNQ9H307 717 aaKnown RBP11.82□□□□□ -0.52
CD28-201ENST00000324106 SMARCA4P51532 1647 aa11.81□□□□□ -0.52
CD28-201ENST00000324106 LAMC3Q9Y6N6 1575 aa11.81□□□□□ -0.52
CD28-201ENST00000324106 RSPH4AQ5TD94 716 aa11.8□□□□□ -0.52
CD28-201ENST00000324106 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
CD28-201ENST00000324106 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
CD28-201ENST00000324106 FMN1Q68DA7 1419 aa11.79□□□□□ -0.52
CD28-201ENST00000324106 EID1Q9Y6B2 187 aa11.78□□□□□ -0.52
CD28-201ENST00000324106 EIF5BO60841 1220 aaKnown RBP11.77□□□□□ -0.52
CD28-201ENST00000324106 CCDC136Q96JN2 1154 aa11.76□□□□□ -0.53
CD28-201ENST00000324106 CHMP4BQ9H444 224 aaKnown RBP11.76□□□□□ -0.53
CD28-201ENST00000324106 GTF3C3Q9Y5Q9 886 aa11.76□□□□□ -0.53
CD28-201ENST00000324106 WDR97A6NE52 1622 aa11.76□□□□□ -0.53
CD28-201ENST00000324106 TMF1P82094 1093 aa11.76□□□□□ -0.53
CD28-201ENST00000324106 ABCC8Q09428 1581 aa11.75□□□□□ -0.53
CD28-201ENST00000324106 JPH4Q96JJ6 628 aa11.75□□□□□ -0.53
CD28-201ENST00000324106 SRPK2P78362 688 aaKnown RBP11.75□□□□□ -0.53
CD28-201ENST00000324106 CCDC88BA6NC98 1476 aa11.73□□□□□ -0.53
CD28-201ENST00000324106 TIMELESSQ9UNS1 1208 aa11.72□□□□□ -0.53
CD28-201ENST00000324106 DCAF11Q8TEB1 546 aa11.72□□□□□ -0.53
CD28-201ENST00000324106 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.53
CD28-201ENST00000324106 ANKRD30AQ9BXX3 1397 aa11.71□□□□□ -0.53
CD28-201ENST00000324106 SPAG9O60271 1321 aaKnown RBP11.71□□□□□ -0.53
CD28-201ENST00000324106 CDK11BP21127 795 aaKnown RBP11.71□□□□□ -0.54
CD28-201ENST00000324106 CHMP4AQ9BY43 222 aa11.71□□□□□ -0.54
CD28-201ENST00000324106 MROH2BQ7Z745 1585 aa11.7□□□□□ -0.54
CD28-201ENST00000324106 MS4A1P11836 297 aa11.7□□□□□ -0.54
CD28-201ENST00000324106 CYB5RLQ6IPT4 315 aa11.7□□□□□ -0.54
CD28-201ENST00000324106 KIF3BO15066 747 aa11.7□□□□□ -0.54
CD28-201ENST00000324106 FKBP8Q14318 412 aa11.69□□□□□ -0.54
CD28-201ENST00000324106 THOC2Q8NI27 1593 aaKnown RBP11.69□□□□□ -0.54
CD28-201ENST00000324106 ARHGAP35Q9NRY4 1499 aa11.69□□□□□ -0.54
CD28-201ENST00000324106 AEBP2Q6ZN18 517 aaPredicted RBP11.68□□□□□ -0.54
CD28-201ENST00000324106 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
CD28-201ENST00000324106 U2SURPO15042 1029 aaKnown RBP11.67□□□□□ -0.54
CD28-201ENST00000324106 ATAD2BQ9ULI0 1458 aa11.67□□□□□ -0.54
CD28-201ENST00000324106 WASHC2CQ9Y4E1 1318 aa11.67□□□□□ -0.54
CD28-201ENST00000324106 HIRIP3Q9BW71 556 aaPredicted RBP11.66□□□□□ -0.54
CD28-201ENST00000324106 CSB-PGBD3P0DP91 1061 aa11.66□□□□□ -0.54
CD28-201ENST00000324106 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
CD28-201ENST00000324106 CASC1Q6TDU7 716 aa11.66□□□□□ -0.54
CD28-201ENST00000324106 PKD2Q13563 968 aa11.65□□□□□ -0.54
CD28-201ENST00000324106 LAS1LQ9Y4W2 734 aaKnown RBP11.65□□□□□ -0.54
CD28-201ENST00000324106 PTPRGP23470 1445 aa11.65□□□□□ -0.54
CD28-201ENST00000324106 STK26Q9P289 416 aa11.64□□□□□ -0.55
CD28-201ENST00000324106 RTF1Q92541 710 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms