RNA–Protein interactions for RNA: ENST00000320640.10

ITFG1-201, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITFG1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-201ENST00000320640 LAS1LQ9Y4W2 734 aaKnown RBP21.11■□□□□ 0.97
ITFG1-201ENST00000320640 CCER2I3L3R5 266 aa21.09■□□□□ 0.97
ITFG1-201ENST00000320640 ZBTB47Q9UFB7 747 aaPredicted RBP21.09■□□□□ 0.97
ITFG1-201ENST00000320640 ANP32AP39687 249 aaKnown RBP21.07■□□□□ 0.96
ITFG1-201ENST00000320640 UBE2Q2Q8WVN8 375 aa21.06■□□□□ 0.96
ITFG1-201ENST00000320640 NACADO15069 1562 aa21.05■□□□□ 0.96
ITFG1-201ENST00000320640 FAM9BQ8IZU0 186 aa21.04■□□□□ 0.96
ITFG1-201ENST00000320640 WDR97A6NE52 1622 aa21.03■□□□□ 0.96
ITFG1-201ENST00000320640 EEA1Q15075 1411 aa21■□□□□ 0.95
ITFG1-201ENST00000320640 RAB3GAP2Q9H2M9 1393 aa21■□□□□ 0.95
ITFG1-201ENST00000320640 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
ITFG1-201ENST00000320640 NEFMP07197 916 aa20.98■□□□□ 0.95
ITFG1-201ENST00000320640 BRPF3Q9ULD4 1205 aa20.98■□□□□ 0.95
ITFG1-201ENST00000320640 IPO9Q96P70 1041 aaKnown RBP20.97■□□□□ 0.95
ITFG1-201ENST00000320640 CEP164Q9UPV0 1460 aa20.96■□□□□ 0.95
ITFG1-201ENST00000320640 FAM50AQ14320 339 aaKnown RBP20.95■□□□□ 0.95
ITFG1-201ENST00000320640 TIMELESSQ9UNS1 1208 aa20.95■□□□□ 0.94
ITFG1-201ENST00000320640 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
ITFG1-201ENST00000320640 CCDC184Q52MB2 194 aa20.94■□□□□ 0.94
ITFG1-201ENST00000320640 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.93
ITFG1-201ENST00000320640 KIF21BO75037 1637 aa20.88■□□□□ 0.93
ITFG1-201ENST00000320640 BAZ1AQ9NRL2 1556 aaPredicted RBP20.86■□□□□ 0.93
ITFG1-201ENST00000320640 MAPKBP1O60336 1514 aa20.84■□□□□ 0.93
ITFG1-201ENST00000320640 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.93
ITFG1-201ENST00000320640 MRS2Q9HD23 443 aa20.78■□□□□ 0.92
ITFG1-201ENST00000320640 PKNOX2Q96KN3 472 aa20.74■□□□□ 0.91
ITFG1-201ENST00000320640 TONSLQ96HA7 1378 aa20.73■□□□□ 0.91
ITFG1-201ENST00000320640 RRBP1Q9P2E9 1410 aaKnown RBP20.71■□□□□ 0.91
ITFG1-201ENST00000320640 AKNAQ7Z591 1439 aa20.7■□□□□ 0.9
ITFG1-201ENST00000320640 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
ITFG1-201ENST00000320640 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
ITFG1-201ENST00000320640 WASHC2AQ641Q2 1341 aa20.68■□□□□ 0.9
ITFG1-201ENST00000320640 SLC4A3P48751 1232 aa20.68■□□□□ 0.9
ITFG1-201ENST00000320640 POLR3GLQ9BT43 218 aa20.65■□□□□ 0.9
ITFG1-201ENST00000320640 ARAP1Q96P48 1450 aa20.63■□□□□ 0.89
ITFG1-201ENST00000320640 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
ITFG1-201ENST00000320640 SKAP1Q86WV1 359 aa20.61■□□□□ 0.89
ITFG1-201ENST00000320640 FRAT1Q92837 279 aaPredicted RBP20.59■□□□□ 0.89
ITFG1-201ENST00000320640 HSPA5P11021 654 aaKnown RBP20.59■□□□□ 0.89
ITFG1-201ENST00000320640 GSE1Q14687 1217 aa20.59■□□□□ 0.89
ITFG1-201ENST00000320640 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
ITFG1-201ENST00000320640 CUX2O14529 1486 aa20.57■□□□□ 0.88
ITFG1-201ENST00000320640 P3H3Q8IVL6 736 aa20.56■□□□□ 0.88
ITFG1-201ENST00000320640 ARXQ96QS3 562 aa20.56■□□□□ 0.88
ITFG1-201ENST00000320640 ZBED9Q6R2W3 1325 aa20.54■□□□□ 0.88
ITFG1-201ENST00000320640 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
ITFG1-201ENST00000320640 WASHC2CQ9Y4E1 1318 aa20.53■□□□□ 0.88
ITFG1-201ENST00000320640 PDE4AP27815 886 aa20.52■□□□□ 0.88
ITFG1-201ENST00000320640 PPM1GO15355 546 aaPredicted RBP20.51■□□□□ 0.87
ITFG1-201ENST00000320640 C11orf95C9JLR9 678 aaPredicted RBP20.51■□□□□ 0.87
ITFG1-201ENST00000320640 PRKRIP1Q9H875 184 aaPredicted RBP20.51■□□□□ 0.87
ITFG1-201ENST00000320640 USP35Q9P2H5 1018 aa20.5■□□□□ 0.87
ITFG1-201ENST00000320640 NFKBIBQ15653 356 aa20.49■□□□□ 0.87
ITFG1-201ENST00000320640 DAXXQ9UER7 740 aaPredicted RBP20.48■□□□□ 0.87
ITFG1-201ENST00000320640 PHLDB1Q86UU1 1377 aa20.46■□□□□ 0.87
ITFG1-201ENST00000320640 EXOC6Q8TAG9 804 aa20.45■□□□□ 0.86
ITFG1-201ENST00000320640 NUDCQ9Y266 331 aa20.43■□□□□ 0.86
ITFG1-201ENST00000320640 EIF4G2P78344 907 aaKnown RBP eCLIP20.41■□□□□ 0.86
ITFG1-201ENST00000320640 RSPH6AQ9H0K4 717 aa20.41■□□□□ 0.86
ITFG1-201ENST00000320640 ZMYND15Q9H091 742 aa20.41■□□□□ 0.86
ITFG1-201ENST00000320640 DCAF11Q8TEB1 546 aa20.4■□□□□ 0.86
ITFG1-201ENST00000320640 PLEKHG5O94827 1062 aa20.38■□□□□ 0.85
ITFG1-201ENST00000320640 ARID4BQ4LE39 1312 aaPredicted RBP20.37■□□□□ 0.85
ITFG1-201ENST00000320640 FRAT2O75474 233 aaPredicted RBP20.37■□□□□ 0.85
ITFG1-201ENST00000320640 BACH2Q9BYV9 841 aa20.36■□□□□ 0.85
ITFG1-201ENST00000320640 GLIPR1L2Q4G1C9 344 aa20.34■□□□□ 0.85
ITFG1-201ENST00000320640 TCERG1O14776 1098 aaKnown RBP20.33■□□□□ 0.84
ITFG1-201ENST00000320640 PABPN1Q86U42 306 aaKnown RBP eCLIP20.33■□□□□ 0.84
ITFG1-201ENST00000320640 FOXD1Q16676 465 aa20.32■□□□□ 0.84
ITFG1-201ENST00000320640 NAP1L5Q96NT1 182 aaPredicted RBP20.32■□□□□ 0.84
ITFG1-201ENST00000320640 CNTLNQ9NXG0 1405 aa20.31■□□□□ 0.84
ITFG1-201ENST00000320640 SMARCA4P51532 1647 aa20.3■□□□□ 0.84
ITFG1-201ENST00000320640 PLIN1O60240 522 aa20.3■□□□□ 0.84
ITFG1-201ENST00000320640 ARHGAP35Q9NRY4 1499 aa20.29■□□□□ 0.84
ITFG1-201ENST00000320640 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
ITFG1-201ENST00000320640 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.84
ITFG1-201ENST00000320640 FAM43AQ8N2R8 423 aa20.26■□□□□ 0.83
ITFG1-201ENST00000320640 RRAGDQ9NQL2 400 aaPredicted RBP20.25■□□□□ 0.83
ITFG1-201ENST00000320640 RRP7BPQ9NSQ0 103 aa20.25■□□□□ 0.83
ITFG1-201ENST00000320640 DDRGK1Q96HY6 314 aa20.24■□□□□ 0.83
ITFG1-201ENST00000320640 ZNF326Q5BKZ1 582 aaKnown RBP20.24■□□□□ 0.83
ITFG1-201ENST00000320640 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
ITFG1-201ENST00000320640 TMC1Q8TDI8 760 aa20.22■□□□□ 0.83
ITFG1-201ENST00000320640 RRP1P56182 461 aaKnown RBP20.22■□□□□ 0.83
ITFG1-201ENST00000320640 CCDC7Q96M83 1385 aa20.21■□□□□ 0.83
ITFG1-201ENST00000320640 PODXL2Q9NZ53 605 aa20.21■□□□□ 0.83
ITFG1-201ENST00000320640 L3MBTL2Q969R5 705 aa20.19■□□□□ 0.82
ITFG1-201ENST00000320640 PRXQ9BXM0 1461 aa20.19■□□□□ 0.82
ITFG1-201ENST00000320640 POGKQ9P215 609 aa20.19■□□□□ 0.82
ITFG1-201ENST00000320640 HSP90AA2PQ14568 343 aaPredicted RBP20.18■□□□□ 0.82
ITFG1-201ENST00000320640 KIF7Q2M1P5 1343 aa20.17■□□□□ 0.82
ITFG1-201ENST00000320640 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
ITFG1-201ENST00000320640 CCDC18Q5T9S5 1454 aa20.16■□□□□ 0.82
ITFG1-201ENST00000320640 RCAN3Q9UKA8 241 aa20.16■□□□□ 0.82
ITFG1-201ENST00000320640 RNF123Q5XPI4 1314 aa20.15■□□□□ 0.82
ITFG1-201ENST00000320640 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.82
ITFG1-201ENST00000320640 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.81
ITFG1-201ENST00000320640 RGS3P49796 1198 aa20.14■□□□□ 0.81
ITFG1-201ENST00000320640 NCAPD3P42695 1498 aa20.13■□□□□ 0.81
ITFG1-201ENST00000320640 SLKQ9H2G2 1235 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms