RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 RUSC2Q8N2Y8 1516 aa25.16■■□□□ 1.62
RPP40-201ENST00000319533 IGF1RP08069 1367 aa25.09■■□□□ 1.61
RPP40-201ENST00000319533 PHF23Q9BUL5 403 aaPredicted RBP25.08■■□□□ 1.61
RPP40-201ENST00000319533 KIF27Q86VH2 1401 aa25.05■■□□□ 1.6
RPP40-201ENST00000319533 KIAA0586Q9BVV6 1533 aa25.04■■□□□ 1.6
RPP40-201ENST00000319533 KIF13AQ9H1H9 1805 aa25.03■■□□□ 1.6
RPP40-201ENST00000319533 CUL7Q14999 1698 aa25.02■■□□□ 1.6
RPP40-201ENST00000319533 MAPKBP1O60336 1514 aa24.96■■□□□ 1.59
RPP40-201ENST00000319533 ABCC10Q5T3U5 1492 aa24.95■■□□□ 1.58
RPP40-201ENST00000319533 ADCY10Q96PN6 1610 aa24.94■■□□□ 1.58
RPP40-201ENST00000319533 NPM1P06748 294 aaKnown RBP eCLIP24.92■■□□□ 1.58
RPP40-201ENST00000319533 CARMIL1Q5VZK9 1371 aa24.89■■□□□ 1.57
RPP40-201ENST00000319533 FAM69CQ0P6D2 419 aa24.88■■□□□ 1.57
RPP40-201ENST00000319533 DIP2BQ9P265 1576 aa24.86■■□□□ 1.57
RPP40-201ENST00000319533 PTPRGP23470 1445 aa24.8■■□□□ 1.56
RPP40-201ENST00000319533 SENP3Q9H4L4 574 aaPredicted RBP24.8■■□□□ 1.56
RPP40-201ENST00000319533 TNIKQ9UKE5 1360 aa24.77■■□□□ 1.56
RPP40-201ENST00000319533 CARMIL2Q6F5E8 1435 aa24.77■■□□□ 1.56
RPP40-201ENST00000319533 IQGAP2Q13576 1575 aa24.74■■□□□ 1.55
RPP40-201ENST00000319533 ABCC2Q92887 1545 aa24.71■■□□□ 1.55
RPP40-201ENST00000319533 UHRF1BP1LA0JNW5 1464 aa24.68■■□□□ 1.54
RPP40-201ENST00000319533 DISP1Q96F81 1524 aa24.67■■□□□ 1.54
RPP40-201ENST00000319533 RAPGEF2Q9Y4G8 1499 aa24.65■■□□□ 1.54
RPP40-201ENST00000319533 KDM6BO15054 1643 aa24.64■■□□□ 1.53
RPP40-201ENST00000319533 UGGT2Q9NYU1 1516 aa24.63■■□□□ 1.53
RPP40-201ENST00000319533 UACAQ9BZF9 1416 aa24.62■■□□□ 1.53
RPP40-201ENST00000319533 PLB1Q6P1J6 1458 aa24.62■■□□□ 1.53
RPP40-201ENST00000319533 TTBK1Q5TCY1 1321 aaPredicted RBP24.61■■□□□ 1.53
RPP40-201ENST00000319533 GLI2P10070 1586 aa24.61■■□□□ 1.53
RPP40-201ENST00000319533 ASXL2Q76L83 1435 aa24.61■■□□□ 1.53
RPP40-201ENST00000319533 TSPOAP1O95153 1857 aa24.6■■□□□ 1.53
RPP40-201ENST00000319533 KDM5BQ9UGL1 1544 aa24.56■■□□□ 1.52
RPP40-201ENST00000319533 KIAA0556O60303 1618 aa24.53■■□□□ 1.52
RPP40-201ENST00000319533 PPRC1Q5VV67 1664 aaKnown RBP24.52■■□□□ 1.52
RPP40-201ENST00000319533 KDM4FA0A1W2PPD8 638 aa24.48■■□□□ 1.51
RPP40-201ENST00000319533 EPRSP07814 1512 aaKnown RBP24.48■■□□□ 1.51
RPP40-201ENST00000319533 ZCCHC11Q5TAX3 1644 aaKnown RBP24.45■■□□□ 1.5
RPP40-201ENST00000319533 MAP3K4Q9Y6R4 1608 aa24.43■■□□□ 1.5
RPP40-201ENST00000319533 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
RPP40-201ENST00000319533 PRXQ9BXM0 1461 aa24.41■■□□□ 1.5
RPP40-201ENST00000319533 GOLGA3Q08378 1498 aa24.39■■□□□ 1.5
RPP40-201ENST00000319533 COL17A1Q9UMD9 1497 aaPredicted RBP24.38■■□□□ 1.49
RPP40-201ENST00000319533 TEX14Q8IWB6 1497 aa24.36■■□□□ 1.49
RPP40-201ENST00000319533 WDR7Q9Y4E6 1490 aa24.36■■□□□ 1.49
RPP40-201ENST00000319533 ABCA8O94911 1581 aa24.34■■□□□ 1.49
RPP40-201ENST00000319533 MAGI3Q5TCQ9 1506 aa24.25■■□□□ 1.47
RPP40-201ENST00000319533 ADGRL1O94910 1474 aa24.23■■□□□ 1.47
RPP40-201ENST00000319533 CFAP43Q8NDM7 1665 aa24.22■■□□□ 1.47
RPP40-201ENST00000319533 CD109Q6YHK3 1445 aa24.21■■□□□ 1.47
RPP40-201ENST00000319533 KCNH8Q96L42 1107 aa24.16■■□□□ 1.46
RPP40-201ENST00000319533 CSRNP3Q8WYN3 585 aa24.15■■□□□ 1.46
RPP40-201ENST00000319533 ATP10BO94823 1461 aa24.13■■□□□ 1.45
RPP40-201ENST00000319533 SAMD9Q5K651 1589 aa24.12■■□□□ 1.45
RPP40-201ENST00000319533 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
RPP40-201ENST00000319533 P3H3Q8IVL6 736 aa24.09■■□□□ 1.45
RPP40-201ENST00000319533 ARAP3Q8WWN8 1544 aa24.06■■□□□ 1.44
RPP40-201ENST00000319533 EEA1Q15075 1411 aa24.06■■□□□ 1.44
RPP40-201ENST00000319533 ABCA9Q8IUA7 1624 aa24.03■■□□□ 1.44
RPP40-201ENST00000319533 RAPGEF6Q8TEU7 1601 aa24.02■■□□□ 1.44
RPP40-201ENST00000319533 PHLDB1Q86UU1 1377 aa24.02■■□□□ 1.44
RPP40-201ENST00000319533 ARID3CA6NKF2 412 aa24.01■■□□□ 1.43
RPP40-201ENST00000319533 NUP153P49790 1475 aaKnown RBP23.95■■□□□ 1.42
RPP40-201ENST00000319533 HECW2Q9P2P5 1572 aa23.93■■□□□ 1.42
RPP40-201ENST00000319533 NEO1Q92859 1461 aa23.93■■□□□ 1.42
RPP40-201ENST00000319533 KIF21BO75037 1637 aa23.92■■□□□ 1.42
RPP40-201ENST00000319533 FHOD3Q2V2M9 1422 aa23.9■■□□□ 1.42
RPP40-201ENST00000319533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.87■■□□□ 1.41
RPP40-201ENST00000319533 HNRNPUL2Q1KMD3 747 aaKnown RBP23.87■■□□□ 1.41
RPP40-201ENST00000319533 EFCAB5A4FU69 1503 aa23.85■■□□□ 1.41
RPP40-201ENST00000319533 RAPGEF3O95398 923 aa23.85■■□□□ 1.41
RPP40-201ENST00000319533 FRMPD1Q5SYB0 1578 aa23.82■■□□□ 1.4
RPP40-201ENST00000319533 RANGAP1P46060 587 aaPredicted RBP23.82■■□□□ 1.4
RPP40-201ENST00000319533 PLEKHD1A6NEE1 506 aa23.81■■□□□ 1.4
RPP40-201ENST00000319533 ILDR1Q86SU0 546 aaPredicted RBP23.8■■□□□ 1.4
RPP40-201ENST00000319533 ADAMTSL3P82987 1691 aa23.79■■□□□ 1.4
RPP40-201ENST00000319533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.75■■□□□ 1.39
RPP40-201ENST00000319533 AKNAQ7Z591 1439 aa23.74■■□□□ 1.39
RPP40-201ENST00000319533 DENND4BO75064 1496 aaPredicted RBP23.74■■□□□ 1.39
RPP40-201ENST00000319533 PTPRMP28827 1452 aa23.74■■□□□ 1.39
RPP40-201ENST00000319533 FANCAO15360 1455 aa23.72■■□□□ 1.39
RPP40-201ENST00000319533 CFAP74Q9C0B2 1584 aa23.72■■□□□ 1.39
RPP40-201ENST00000319533 RICTORQ6R327 1708 aa23.72■■□□□ 1.39
RPP40-201ENST00000319533 BCORL1Q5H9F3 1711 aa23.71■■□□□ 1.39
RPP40-201ENST00000319533 TTC37Q6PGP7 1564 aa23.69■■□□□ 1.38
RPP40-201ENST00000319533 ARHGEF40Q8TER5 1519 aa23.69■■□□□ 1.38
RPP40-201ENST00000319533 CDK13Q14004 1512 aaKnown RBP23.67■■□□□ 1.38
RPP40-201ENST00000319533 ZMYM4Q5VZL5 1548 aa23.66■■□□□ 1.38
RPP40-201ENST00000319533 ARID4BQ4LE39 1312 aaPredicted RBP23.63■■□□□ 1.37
RPP40-201ENST00000319533 MADDQ8WXG6 1647 aa23.63■■□□□ 1.37
RPP40-201ENST00000319533 PLCH2O75038 1416 aa23.63■■□□□ 1.37
RPP40-201ENST00000319533 FMN1Q68DA7 1419 aa23.63■■□□□ 1.37
RPP40-201ENST00000319533 MAGI2Q86UL8 1455 aa23.62■■□□□ 1.37
RPP40-201ENST00000319533 ARHGAP35Q9NRY4 1499 aa23.62■■□□□ 1.37
RPP40-201ENST00000319533 UBTFP17480 764 aaKnown RBP23.61■■□□□ 1.37
RPP40-201ENST00000319533 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
RPP40-201ENST00000319533 ZFYVE16Q7Z3T8 1539 aa23.58■■□□□ 1.36
RPP40-201ENST00000319533 YEATS2Q9ULM3 1422 aa23.57■■□□□ 1.36
RPP40-201ENST00000319533 POGZQ7Z3K3 1410 aa23.55■■□□□ 1.36
RPP40-201ENST00000319533 SCAPERQ9BY12 1400 aa23.55■■□□□ 1.36
RPP40-201ENST00000319533 PCF11O94913 1555 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms