RNA–Protein interactions for RNA: ENST00000319516.8

TFAP2A-201, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5 BASIC

Gene TFAP2A, Length 2,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-201ENST00000319516 FHAD1B1AJZ9 1412 aa23.63■■□□□ 1.37
TFAP2A-201ENST00000319516 MAP3K1Q13233 1512 aa23.61■■□□□ 1.37
TFAP2A-201ENST00000319516 FHOD3Q2V2M9 1422 aa23.6■■□□□ 1.37
TFAP2A-201ENST00000319516 EFCAB5A4FU69 1503 aa23.59■■□□□ 1.37
TFAP2A-201ENST00000319516 TARBP1Q13395 1621 aaKnown RBP23.58■■□□□ 1.37
TFAP2A-201ENST00000319516 PCF11O94913 1555 aaKnown RBP23.58■■□□□ 1.37
TFAP2A-201ENST00000319516 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
TFAP2A-201ENST00000319516 ATP1B4Q9UN42 357 aaPredicted RBP23.54■■□□□ 1.36
TFAP2A-201ENST00000319516 LRRC9Q6ZRR7 1453 aa23.54■■□□□ 1.36
TFAP2A-201ENST00000319516 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
TFAP2A-201ENST00000319516 CFAP43Q8NDM7 1665 aa23.51■■□□□ 1.35
TFAP2A-201ENST00000319516 FYCO1Q9BQS8 1478 aa23.48■■□□□ 1.35
TFAP2A-201ENST00000319516 CASKIN1Q8WXD9 1431 aa23.46■■□□□ 1.35
TFAP2A-201ENST00000319516 PBRM1Q86U86 1689 aa23.46■■□□□ 1.35
TFAP2A-201ENST00000319516 ITGAEP38570 1179 aa23.45■■□□□ 1.35
TFAP2A-201ENST00000319516 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.34
TFAP2A-201ENST00000319516 FMN1Q68DA7 1419 aa23.43■■□□□ 1.34
TFAP2A-201ENST00000319516 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
TFAP2A-201ENST00000319516 PHLDB1Q86UU1 1377 aa23.42■■□□□ 1.34
TFAP2A-201ENST00000319516 SAMD9Q5K651 1589 aa23.42■■□□□ 1.34
TFAP2A-201ENST00000319516 DIEXFQ68CQ4 756 aaKnown RBP23.38■■□□□ 1.33
TFAP2A-201ENST00000319516 SNAPC4Q5SXM2 1469 aa23.37■■□□□ 1.33
TFAP2A-201ENST00000319516 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
TFAP2A-201ENST00000319516 CLSPNQ9HAW4 1339 aa23.35■■□□□ 1.33
TFAP2A-201ENST00000319516 WDR62O43379 1518 aa23.35■■□□□ 1.33
TFAP2A-201ENST00000319516 ADAMTS12P58397 1594 aa23.34■■□□□ 1.33
TFAP2A-201ENST00000319516 GRIN2BQ13224 1484 aa23.33■■□□□ 1.32
TFAP2A-201ENST00000319516 IFT140Q96RY7 1462 aa23.33■■□□□ 1.32
TFAP2A-201ENST00000319516 FAM50AQ14320 339 aaKnown RBP23.32■■□□□ 1.32
TFAP2A-201ENST00000319516 ZNF608Q9ULD9 1512 aaPredicted RBP23.31■■□□□ 1.32
TFAP2A-201ENST00000319516 RAB3GAP2Q9H2M9 1393 aa23.27■■□□□ 1.32
TFAP2A-201ENST00000319516 LRRIQ1Q96JM4 1722 aa23.26■■□□□ 1.31
TFAP2A-201ENST00000319516 ERCC6Q03468 1493 aa23.26■■□□□ 1.31
TFAP2A-201ENST00000319516 IQGAP2Q13576 1575 aa23.25■■□□□ 1.31
TFAP2A-201ENST00000319516 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
TFAP2A-201ENST00000319516 SETD5Q9C0A6 1442 aa23.21■■□□□ 1.31
TFAP2A-201ENST00000319516 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
TFAP2A-201ENST00000319516 EIF4G3O43432 1585 aaKnown RBP23.17■■□□□ 1.3
TFAP2A-201ENST00000319516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.16■■□□□ 1.3
TFAP2A-201ENST00000319516 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
TFAP2A-201ENST00000319516 NCOA2Q15596 1464 aa23.12■■□□□ 1.29
TFAP2A-201ENST00000319516 EHBP1L1Q8N3D4 1523 aa23.12■■□□□ 1.29
TFAP2A-201ENST00000319516 UGGT2Q9NYU1 1516 aa23.11■■□□□ 1.29
TFAP2A-201ENST00000319516 CCDC18Q5T9S5 1454 aa23.11■■□□□ 1.29
TFAP2A-201ENST00000319516 SUPT6HQ7KZ85 1726 aaKnown RBP23.11■■□□□ 1.29
TFAP2A-201ENST00000319516 HECW1Q76N89 1606 aa23.11■■□□□ 1.29
TFAP2A-201ENST00000319516 MAPKBP1O60336 1514 aa23.09■■□□□ 1.29
TFAP2A-201ENST00000319516 GRIN2AQ12879 1464 aa23.08■■□□□ 1.28
TFAP2A-201ENST00000319516 MAGI3Q5TCQ9 1506 aa23.07■■□□□ 1.28
TFAP2A-201ENST00000319516 KIAA0586Q9BVV6 1533 aa23.07■■□□□ 1.28
TFAP2A-201ENST00000319516 MYOM3Q5VTT5 1437 aa23.06■■□□□ 1.28
TFAP2A-201ENST00000319516 EPRSP07814 1512 aaKnown RBP23.04■■□□□ 1.28
TFAP2A-201ENST00000319516 MAGI1Q96QZ7 1491 aaPredicted RBP23.02■■□□□ 1.28
TFAP2A-201ENST00000319516 KIAA0556O60303 1618 aa23.02■■□□□ 1.28
TFAP2A-201ENST00000319516 CDK13Q14004 1512 aaKnown RBP23.01■■□□□ 1.27
TFAP2A-201ENST00000319516 ARHGEF11O15085 1522 aa23■■□□□ 1.27
TFAP2A-201ENST00000319516 DISP1Q96F81 1524 aa23■■□□□ 1.27
TFAP2A-201ENST00000319516 ARID3CA6NKF2 412 aa23■■□□□ 1.27
TFAP2A-201ENST00000319516 PTPRKQ15262 1439 aa22.98■■□□□ 1.27
TFAP2A-201ENST00000319516 CHMP7Q8WUX9 453 aaPredicted RBP22.98■■□□□ 1.27
TFAP2A-201ENST00000319516 PTPN23Q9H3S7 1636 aa22.98■■□□□ 1.27
TFAP2A-201ENST00000319516 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
TFAP2A-201ENST00000319516 FBLN2P98095 1184 aa22.94■■□□□ 1.26
TFAP2A-201ENST00000319516 CEP170Q5SW79 1584 aa22.94■■□□□ 1.26
TFAP2A-201ENST00000319516 MIER1Q8N108 512 aa22.93■■□□□ 1.26
TFAP2A-201ENST00000319516 HFM1A2PYH4 1435 aa22.92■■□□□ 1.26
TFAP2A-201ENST00000319516 SIN3AQ96ST3 1273 aa22.92■■□□□ 1.26
TFAP2A-201ENST00000319516 NEUROD1Q13562 356 aa22.9■■□□□ 1.26
TFAP2A-201ENST00000319516 RAPGEF6Q8TEU7 1601 aa22.88■■□□□ 1.25
TFAP2A-201ENST00000319516 TCOF1Q13428 1488 aaKnown RBP22.88■■□□□ 1.25
TFAP2A-201ENST00000319516 SCAF1Q9H7N4 1312 aaKnown RBP22.88■■□□□ 1.25
TFAP2A-201ENST00000319516 ACIN1Q9UKV3 1341 aaKnown RBP22.87■■□□□ 1.25
TFAP2A-201ENST00000319516 NUP153P49790 1475 aaKnown RBP22.87■■□□□ 1.25
TFAP2A-201ENST00000319516 NAIPQ13075 1403 aa22.87■■□□□ 1.25
TFAP2A-201ENST00000319516 CENPBP07199 599 aaPredicted RBP22.85■■□□□ 1.25
TFAP2A-201ENST00000319516 NUP160Q12769 1436 aa22.83■■□□□ 1.25
TFAP2A-201ENST00000319516 MIA2Q96PC5 1412 aa22.83■■□□□ 1.24
TFAP2A-201ENST00000319516 UACAQ9BZF9 1416 aa22.82■■□□□ 1.24
TFAP2A-201ENST00000319516 CHIC2Q9UKJ5 165 aa22.81■■□□□ 1.24
TFAP2A-201ENST00000319516 JPH4Q96JJ6 628 aa22.8■■□□□ 1.24
TFAP2A-201ENST00000319516 RRP7BPQ9NSQ0 103 aa22.79■■□□□ 1.24
TFAP2A-201ENST00000319516 CARMIL2Q6F5E8 1435 aa22.78■■□□□ 1.24
TFAP2A-201ENST00000319516 PLB1Q6P1J6 1458 aa22.77■■□□□ 1.24
TFAP2A-201ENST00000319516 TIMELESSQ9UNS1 1208 aa22.77■■□□□ 1.24
TFAP2A-201ENST00000319516 CDK11AQ9UQ88 783 aaPredicted RBP22.77■■□□□ 1.24
TFAP2A-201ENST00000319516 YTHDC1Q96MU7 727 aaKnown RBP22.76■■□□□ 1.23
TFAP2A-201ENST00000319516 GCC2Q8IWJ2 1684 aa22.74■■□□□ 1.23
TFAP2A-201ENST00000319516 AKNAQ7Z591 1439 aa22.7■■□□□ 1.22
TFAP2A-201ENST00000319516 PRG4Q92954 1404 aaPredicted RBP22.7■■□□□ 1.22
TFAP2A-201ENST00000319516 TROQ12816 1431 aaPredicted RBP22.69■■□□□ 1.22
TFAP2A-201ENST00000319516 PPP1R15AO75807 674 aaPredicted RBP22.68■■□□□ 1.22
TFAP2A-201ENST00000319516 KDM6BO15054 1643 aa22.67■■□□□ 1.22
TFAP2A-201ENST00000319516 TONSLQ96HA7 1378 aa22.67■■□□□ 1.22
TFAP2A-201ENST00000319516 ZNF644Q9H582 1327 aaPredicted RBP22.67■■□□□ 1.22
TFAP2A-201ENST00000319516 DAPK1P53355 1430 aa22.66■■□□□ 1.22
TFAP2A-201ENST00000319516 TRIM52Q96A61 297 aa22.65■■□□□ 1.22
TFAP2A-201ENST00000319516 DNMT1P26358 1616 aaKnown RBP22.64■■□□□ 1.21
TFAP2A-201ENST00000319516 ABCC5O15440 1437 aa22.62■■□□□ 1.21
TFAP2A-201ENST00000319516 KIF14Q15058 1648 aa22.62■■□□□ 1.21
TFAP2A-201ENST00000319516 ABCA8O94911 1581 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms