RNA–Protein interactions for RNA: ENST00000316364.9

SEMA6D-201, Transcript of semaphorin 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6D, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-201ENST00000316364 TONSLQ96HA7 1378 aa16.27■□□□□ 0.19
SEMA6D-201ENST00000316364 PPP1R15AO75807 674 aaPredicted RBP16.26■□□□□ 0.19
SEMA6D-201ENST00000316364 RTL5Q5HYW3 569 aaPredicted RBP16.24■□□□□ 0.19
SEMA6D-201ENST00000316364 ZBTB7CA1YPR0 619 aa16.22■□□□□ 0.19
SEMA6D-201ENST00000316364 AEBP2Q6ZN18 517 aaPredicted RBP16.22■□□□□ 0.19
SEMA6D-201ENST00000316364 CCNB3Q8WWL7 1395 aa16.19■□□□□ 0.18
SEMA6D-201ENST00000316364 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.18
SEMA6D-201ENST00000316364 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
SEMA6D-201ENST00000316364 KIF27Q86VH2 1401 aa16.17■□□□□ 0.18
SEMA6D-201ENST00000316364 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
SEMA6D-201ENST00000316364 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
SEMA6D-201ENST00000316364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
SEMA6D-201ENST00000316364 TSHZ2Q9NRE2 1034 aa16.11■□□□□ 0.17
SEMA6D-201ENST00000316364 RUSC2Q8N2Y8 1516 aa16.1■□□□□ 0.17
SEMA6D-201ENST00000316364 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
SEMA6D-201ENST00000316364 CCER2I3L3R5 266 aa16.1■□□□□ 0.17
SEMA6D-201ENST00000316364 DHX57Q6P158 1386 aaKnown RBP16.1■□□□□ 0.17
SEMA6D-201ENST00000316364 TSPY4P0CV99 314 aa16.06■□□□□ 0.16
SEMA6D-201ENST00000316364 TSPY10P0CW01 314 aa16.06■□□□□ 0.16
SEMA6D-201ENST00000316364 SMARCA4P51532 1647 aa16.06■□□□□ 0.16
SEMA6D-201ENST00000316364 NPHP1O15259 732 aa16.06■□□□□ 0.16
SEMA6D-201ENST00000316364 KANK4Q5T7N3 995 aaPredicted RBP16.06■□□□□ 0.16
SEMA6D-201ENST00000316364 ANP32AP39687 249 aaKnown RBP16.05■□□□□ 0.16
SEMA6D-201ENST00000316364 KCNH8Q96L42 1107 aa16.05■□□□□ 0.16
SEMA6D-201ENST00000316364 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
SEMA6D-201ENST00000316364 HIRIP3Q9BW71 556 aaPredicted RBP16.02■□□□□ 0.16
SEMA6D-201ENST00000316364 SETD5Q9C0A6 1442 aa16.02■□□□□ 0.16
SEMA6D-201ENST00000316364 RAPGEF2Q9Y4G8 1499 aa16.02■□□□□ 0.15
SEMA6D-201ENST00000316364 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
SEMA6D-201ENST00000316364 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
SEMA6D-201ENST00000316364 RBM19Q9Y4C8 960 aaKnown RBP15.98■□□□□ 0.15
SEMA6D-201ENST00000316364 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
SEMA6D-201ENST00000316364 FHAD1B1AJZ9 1412 aa15.98■□□□□ 0.15
SEMA6D-201ENST00000316364 EIF4G2P78344 907 aaKnown RBP eCLIP15.98■□□□□ 0.15
SEMA6D-201ENST00000316364 ARXQ96QS3 562 aa15.98■□□□□ 0.15
SEMA6D-201ENST00000316364 FAM9BQ8IZU0 186 aa15.97■□□□□ 0.15
SEMA6D-201ENST00000316364 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
SEMA6D-201ENST00000316364 MRS2Q9HD23 443 aa15.96■□□□□ 0.14
SEMA6D-201ENST00000316364 LMOD2Q6P5Q4 547 aa15.95■□□□□ 0.14
SEMA6D-201ENST00000316364 CDK11BP21127 795 aaKnown RBP15.93■□□□□ 0.14
SEMA6D-201ENST00000316364 ERICH6BQ5W0A0 696 aa15.93■□□□□ 0.14
SEMA6D-201ENST00000316364 PPP4R2Q9NY27 417 aa15.93■□□□□ 0.14
SEMA6D-201ENST00000316364 IRX6P78412 446 aaPredicted RBP15.92■□□□□ 0.14
SEMA6D-201ENST00000316364 KIF21BO75037 1637 aa15.92■□□□□ 0.14
SEMA6D-201ENST00000316364 CCDC136Q96JN2 1154 aa15.9■□□□□ 0.14
SEMA6D-201ENST00000316364 PLEKHD1A6NEE1 506 aa15.89■□□□□ 0.13
SEMA6D-201ENST00000316364 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
SEMA6D-201ENST00000316364 HDGFP51858 240 aaKnown RBP15.85■□□□□ 0.13
SEMA6D-201ENST00000316364 CHIC2Q9UKJ5 165 aa15.84■□□□□ 0.13
SEMA6D-201ENST00000316364 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
SEMA6D-201ENST00000316364 CUX2O14529 1486 aa15.83■□□□□ 0.12
SEMA6D-201ENST00000316364 ARHGAP35Q9NRY4 1499 aa15.81■□□□□ 0.12
SEMA6D-201ENST00000316364 TMC1Q8TDI8 760 aa15.79■□□□□ 0.12
SEMA6D-201ENST00000316364 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
SEMA6D-201ENST00000316364 RRBP1Q9P2E9 1410 aaKnown RBP15.79■□□□□ 0.12
SEMA6D-201ENST00000316364 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
SEMA6D-201ENST00000316364 NBR1Q14596 966 aa15.77■□□□□ 0.12
SEMA6D-201ENST00000316364 MLECQ14165 292 aa15.76■□□□□ 0.11
SEMA6D-201ENST00000316364 ERICH3Q5RHP9 1530 aa15.75■□□□□ 0.11
SEMA6D-201ENST00000316364 HSP90AA1P07900 732 aaKnown RBP15.73■□□□□ 0.11
SEMA6D-201ENST00000316364 NOP58Q9Y2X3 529 aaKnown RBP15.73■□□□□ 0.11
SEMA6D-201ENST00000316364 MYH16Q9H6N6 1097 aa15.72■□□□□ 0.11
SEMA6D-201ENST00000316364 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
SEMA6D-201ENST00000316364 TMX4Q9H1E5 349 aaPredicted RBP15.72■□□□□ 0.11
SEMA6D-201ENST00000316364 WDR43Q15061 677 aaKnown RBP eCLIP15.71■□□□□ 0.11
SEMA6D-201ENST00000316364 HSPA5P11021 654 aaKnown RBP15.71■□□□□ 0.1
SEMA6D-201ENST00000316364 KDM2AQ9Y2K7 1162 aa15.71■□□□□ 0.1
SEMA6D-201ENST00000316364 CCDC9Q9Y3X0 531 aaKnown RBP15.71■□□□□ 0.1
SEMA6D-201ENST00000316364 FANCIQ9NVI1 1328 aa15.69■□□□□ 0.1
SEMA6D-201ENST00000316364 B4GALNT3Q6L9W6 998 aa15.69■□□□□ 0.1
SEMA6D-201ENST00000316364 POGKQ9P215 609 aa15.68■□□□□ 0.1
SEMA6D-201ENST00000316364 PRXQ9BXM0 1461 aa15.68■□□□□ 0.1
SEMA6D-201ENST00000316364 FMN1Q68DA7 1419 aa15.67■□□□□ 0.1
SEMA6D-201ENST00000316364 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
SEMA6D-201ENST00000316364 EIF4G1Q04637 1599 aaKnown RBP15.65■□□□□ 0.1
SEMA6D-201ENST00000316364 UPF2Q9HAU5 1272 aaKnown RBP15.64■□□□□ 0.09
SEMA6D-201ENST00000316364 GOLGA2Q08379 1002 aa15.63■□□□□ 0.09
SEMA6D-201ENST00000316364 DEKP35659 375 aaKnown RBP15.63■□□□□ 0.09
SEMA6D-201ENST00000316364 TULP1O00294 542 aaPredicted RBP15.61■□□□□ 0.09
SEMA6D-201ENST00000316364 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.6■□□□□ 0.09
SEMA6D-201ENST00000316364 DDRGK1Q96HY6 314 aa15.6■□□□□ 0.09
SEMA6D-201ENST00000316364 PPM1GO15355 546 aaPredicted RBP15.6■□□□□ 0.09
SEMA6D-201ENST00000316364 IGF1RP08069 1367 aa15.59■□□□□ 0.09
SEMA6D-201ENST00000316364 CFAP53Q96M91 514 aa15.59■□□□□ 0.09
SEMA6D-201ENST00000316364 PHF23Q9BUL5 403 aaPredicted RBP15.59■□□□□ 0.09
SEMA6D-201ENST00000316364 LRRC9Q6ZRR7 1453 aa15.58■□□□□ 0.08
SEMA6D-201ENST00000316364 ANP32BQ92688 251 aaKnown RBP15.58■□□□□ 0.08
SEMA6D-201ENST00000316364 PHLDB1Q86UU1 1377 aa15.57■□□□□ 0.08
SEMA6D-201ENST00000316364 TOP2BQ02880 1626 aa15.57■□□□□ 0.08
SEMA6D-201ENST00000316364 SALL2Q9Y467 1007 aaPredicted RBP15.56■□□□□ 0.08
SEMA6D-201ENST00000316364 FHOD3Q2V2M9 1422 aa15.56■□□□□ 0.08
SEMA6D-201ENST00000316364 KANK1Q14678 1352 aa15.55■□□□□ 0.08
SEMA6D-201ENST00000316364 CCDC18Q5T9S5 1454 aa15.54■□□□□ 0.08
SEMA6D-201ENST00000316364 MEX3CQ5U5Q3 659 aaKnown RBP15.54■□□□□ 0.08
SEMA6D-201ENST00000316364 MPHOSPH9Q99550 1183 aa15.54■□□□□ 0.08
SEMA6D-201ENST00000316364 FOXD1Q16676 465 aa15.54■□□□□ 0.08
SEMA6D-201ENST00000316364 CFDP1Q9UEE9 299 aaPredicted RBP15.54■□□□□ 0.08
SEMA6D-201ENST00000316364 CDCA8Q53HL2 280 aa15.54■□□□□ 0.08
SEMA6D-201ENST00000316364 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
SEMA6D-201ENST00000316364 ZBED9Q6R2W3 1325 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms