RNA–Protein interactions for RNA: ENST00000316227.3

PRIMA1-201, Transcript of proline rich membrane anchor 1, humanhuman

TSL 1 (best) BASIC

Gene PRIMA1, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIMA1-201ENST00000316227 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
PRIMA1-201ENST00000316227 KIAA0586Q9BVV6 1533 aa23.9■■□□□ 1.42
PRIMA1-201ENST00000316227 CSRNP3Q8WYN3 585 aa23.9■■□□□ 1.42
PRIMA1-201ENST00000316227 PRXQ9BXM0 1461 aa23.89■■□□□ 1.42
PRIMA1-201ENST00000316227 JPH4Q96JJ6 628 aa23.89■■□□□ 1.41
PRIMA1-201ENST00000316227 EEA1Q15075 1411 aa23.89■■□□□ 1.41
PRIMA1-201ENST00000316227 SHROOM2Q13796 1616 aa23.88■■□□□ 1.41
PRIMA1-201ENST00000316227 ERCC6L2Q5T890 1561 aa23.84■■□□□ 1.41
PRIMA1-201ENST00000316227 FAM9AQ8IZU1 332 aaPredicted RBP23.84■■□□□ 1.41
PRIMA1-201ENST00000316227 PRG4Q92954 1404 aaPredicted RBP23.83■■□□□ 1.4
PRIMA1-201ENST00000316227 AEBP2Q6ZN18 517 aaPredicted RBP23.78■■□□□ 1.4
PRIMA1-201ENST00000316227 IQGAP2Q13576 1575 aa23.74■■□□□ 1.39
PRIMA1-201ENST00000316227 UGGT2Q9NYU1 1516 aa23.64■■□□□ 1.37
PRIMA1-201ENST00000316227 CARMIL2Q6F5E8 1435 aa23.62■■□□□ 1.37
PRIMA1-201ENST00000316227 DISP1Q96F81 1524 aa23.61■■□□□ 1.37
PRIMA1-201ENST00000316227 KIF21BO75037 1637 aa23.61■■□□□ 1.37
PRIMA1-201ENST00000316227 CTTNBP2Q8WZ74 1663 aa23.6■■□□□ 1.37
PRIMA1-201ENST00000316227 TNIKQ9UKE5 1360 aa23.56■■□□□ 1.36
PRIMA1-201ENST00000316227 PTPRGP23470 1445 aa23.55■■□□□ 1.36
PRIMA1-201ENST00000316227 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
PRIMA1-201ENST00000316227 KIAA0556O60303 1618 aa23.5■■□□□ 1.35
PRIMA1-201ENST00000316227 TTBK1Q5TCY1 1321 aaPredicted RBP23.5■■□□□ 1.35
PRIMA1-201ENST00000316227 GOLGA3Q08378 1498 aa23.49■■□□□ 1.35
PRIMA1-201ENST00000316227 KIF13AQ9H1H9 1805 aa23.48■■□□□ 1.35
PRIMA1-201ENST00000316227 UBTFP17480 764 aaKnown RBP23.47■■□□□ 1.35
PRIMA1-201ENST00000316227 NPM1P06748 294 aaKnown RBP eCLIP23.44■■□□□ 1.34
PRIMA1-201ENST00000316227 ADCY10Q96PN6 1610 aa23.41■■□□□ 1.34
PRIMA1-201ENST00000316227 FAM69CQ0P6D2 419 aa23.41■■□□□ 1.34
PRIMA1-201ENST00000316227 RANGAP1P46060 587 aaPredicted RBP23.4■■□□□ 1.34
PRIMA1-201ENST00000316227 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
PRIMA1-201ENST00000316227 UACAQ9BZF9 1416 aa23.38■■□□□ 1.33
PRIMA1-201ENST00000316227 SAMD9Q5K651 1589 aa23.38■■□□□ 1.33
PRIMA1-201ENST00000316227 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
PRIMA1-201ENST00000316227 UHRF1BP1LA0JNW5 1464 aa23.36■■□□□ 1.33
PRIMA1-201ENST00000316227 ABCC2Q92887 1545 aa23.32■■□□□ 1.32
PRIMA1-201ENST00000316227 PLB1Q6P1J6 1458 aa23.31■■□□□ 1.32
PRIMA1-201ENST00000316227 MAPKBP1O60336 1514 aa23.31■■□□□ 1.32
PRIMA1-201ENST00000316227 FHOD3Q2V2M9 1422 aa23.28■■□□□ 1.32
PRIMA1-201ENST00000316227 EFCAB5A4FU69 1503 aa23.28■■□□□ 1.32
PRIMA1-201ENST00000316227 DIP2BQ9P265 1576 aa23.27■■□□□ 1.32
PRIMA1-201ENST00000316227 ABCA8O94911 1581 aa23.27■■□□□ 1.32
PRIMA1-201ENST00000316227 KDM5BQ9UGL1 1544 aa23.25■■□□□ 1.31
PRIMA1-201ENST00000316227 ARHGAP35Q9NRY4 1499 aa23.23■■□□□ 1.31
PRIMA1-201ENST00000316227 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
PRIMA1-201ENST00000316227 KDM4FA0A1W2PPD8 638 aa23.15■■□□□ 1.3
PRIMA1-201ENST00000316227 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
PRIMA1-201ENST00000316227 TSPOAP1O95153 1857 aa23.15■■□□□ 1.3
PRIMA1-201ENST00000316227 KDM6BO15054 1643 aa23.15■■□□□ 1.3
PRIMA1-201ENST00000316227 ZCCHC11Q5TAX3 1644 aaKnown RBP23.14■■□□□ 1.29
PRIMA1-201ENST00000316227 RAPGEF6Q8TEU7 1601 aa23.12■■□□□ 1.29
PRIMA1-201ENST00000316227 ARID3CA6NKF2 412 aa23.12■■□□□ 1.29
PRIMA1-201ENST00000316227 CLIP1P30622 1438 aa23.11■■□□□ 1.29
PRIMA1-201ENST00000316227 ATP10BO94823 1461 aa23.11■■□□□ 1.29
PRIMA1-201ENST00000316227 NUP153P49790 1475 aaKnown RBP23.1■■□□□ 1.29
PRIMA1-201ENST00000316227 FMN1Q68DA7 1419 aa23.08■■□□□ 1.29
PRIMA1-201ENST00000316227 WDR7Q9Y4E6 1490 aa23.05■■□□□ 1.28
PRIMA1-201ENST00000316227 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
PRIMA1-201ENST00000316227 CEP162Q5TB80 1403 aa23.01■■□□□ 1.27
PRIMA1-201ENST00000316227 GLI2P10070 1586 aa22.99■■□□□ 1.27
PRIMA1-201ENST00000316227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.99■■□□□ 1.27
PRIMA1-201ENST00000316227 HNRNPUL2Q1KMD3 747 aaKnown RBP22.99■■□□□ 1.27
PRIMA1-201ENST00000316227 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
PRIMA1-201ENST00000316227 ATP1B4Q9UN42 357 aaPredicted RBP22.96■■□□□ 1.27
PRIMA1-201ENST00000316227 PPRC1Q5VV67 1664 aaKnown RBP22.95■■□□□ 1.26
PRIMA1-201ENST00000316227 CASKIN1Q8WXD9 1431 aa22.93■■□□□ 1.26
PRIMA1-201ENST00000316227 HECW1Q76N89 1606 aa22.93■■□□□ 1.26
PRIMA1-201ENST00000316227 CDK13Q14004 1512 aaKnown RBP22.92■■□□□ 1.26
PRIMA1-201ENST00000316227 PLEKHD1A6NEE1 506 aa22.91■■□□□ 1.26
PRIMA1-201ENST00000316227 COL17A1Q9UMD9 1497 aaPredicted RBP22.9■■□□□ 1.26
PRIMA1-201ENST00000316227 PCF11O94913 1555 aaKnown RBP22.89■■□□□ 1.25
PRIMA1-201ENST00000316227 MAP3K4Q9Y6R4 1608 aa22.86■■□□□ 1.25
PRIMA1-201ENST00000316227 FYCO1Q9BQS8 1478 aa22.85■■□□□ 1.25
PRIMA1-201ENST00000316227 CD109Q6YHK3 1445 aa22.84■■□□□ 1.25
PRIMA1-201ENST00000316227 ADGRL1O94910 1474 aa22.83■■□□□ 1.25
PRIMA1-201ENST00000316227 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
PRIMA1-201ENST00000316227 LRRIQ1Q96JM4 1722 aa22.8■■□□□ 1.24
PRIMA1-201ENST00000316227 CCDC18Q5T9S5 1454 aa22.79■■□□□ 1.24
PRIMA1-201ENST00000316227 TEX14Q8IWB6 1497 aa22.79■■□□□ 1.24
PRIMA1-201ENST00000316227 CFAP43Q8NDM7 1665 aa22.79■■□□□ 1.24
PRIMA1-201ENST00000316227 ABCA9Q8IUA7 1624 aa22.79■■□□□ 1.24
PRIMA1-201ENST00000316227 MAGI3Q5TCQ9 1506 aa22.78■■□□□ 1.24
PRIMA1-201ENST00000316227 TROQ12816 1431 aaPredicted RBP22.75■■□□□ 1.23
PRIMA1-201ENST00000316227 ILDR1Q86SU0 546 aaPredicted RBP22.75■■□□□ 1.23
PRIMA1-201ENST00000316227 VPS8Q8N3P4 1428 aa22.73■■□□□ 1.23
PRIMA1-201ENST00000316227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.72■■□□□ 1.23
PRIMA1-201ENST00000316227 TTC37Q6PGP7 1564 aa22.68■■□□□ 1.22
PRIMA1-201ENST00000316227 KIF14Q15058 1648 aa22.66■■□□□ 1.22
PRIMA1-201ENST00000316227 PHLDB1Q86UU1 1377 aa22.63■■□□□ 1.21
PRIMA1-201ENST00000316227 NEO1Q92859 1461 aa22.62■■□□□ 1.21
PRIMA1-201ENST00000316227 PLCH2O75038 1416 aa22.62■■□□□ 1.21
PRIMA1-201ENST00000316227 HECW2Q9P2P5 1572 aa22.6■■□□□ 1.21
PRIMA1-201ENST00000316227 MTUS2Q5JR59 1369 aa22.6■■□□□ 1.21
PRIMA1-201ENST00000316227 ARAP3Q8WWN8 1544 aa22.59■■□□□ 1.21
PRIMA1-201ENST00000316227 FANCAO15360 1455 aa22.58■■□□□ 1.2
PRIMA1-201ENST00000316227 AKNAQ7Z591 1439 aa22.56■■□□□ 1.2
PRIMA1-201ENST00000316227 TIAM1Q13009 1591 aa22.55■■□□□ 1.2
PRIMA1-201ENST00000316227 EFCAB2Q5VUJ9 269 aa22.54■■□□□ 1.2
PRIMA1-201ENST00000316227 EHBP1L1Q8N3D4 1523 aa22.52■■□□□ 1.2
PRIMA1-201ENST00000316227 RAPGEF3O95398 923 aa22.52■■□□□ 1.2
PRIMA1-201ENST00000316227 MAP3K1Q13233 1512 aa22.52■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms