RNA–Protein interactions for RNA: ENST00000315732.2

LSM10-201, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM10, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-201ENST00000315732 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
LSM10-201ENST00000315732 KIAA0586Q9BVV6 1533 aa25.44■■□□□ 1.66
LSM10-201ENST00000315732 CARMIL1Q5VZK9 1371 aa25.43■■□□□ 1.66
LSM10-201ENST00000315732 CUL7Q14999 1698 aa25.4■■□□□ 1.66
LSM10-201ENST00000315732 NPM1P06748 294 aaKnown RBP eCLIP25.39■■□□□ 1.66
LSM10-201ENST00000315732 FAM69CQ0P6D2 419 aa25.24■■□□□ 1.63
LSM10-201ENST00000315732 PTPRGP23470 1445 aa25.23■■□□□ 1.63
LSM10-201ENST00000315732 CARMIL2Q6F5E8 1435 aa25.22■■□□□ 1.63
LSM10-201ENST00000315732 ABCC10Q5T3U5 1492 aa25.19■■□□□ 1.62
LSM10-201ENST00000315732 ADCY10Q96PN6 1610 aa25.19■■□□□ 1.62
LSM10-201ENST00000315732 TNIKQ9UKE5 1360 aa25.18■■□□□ 1.62
LSM10-201ENST00000315732 MAPKBP1O60336 1514 aa25.18■■□□□ 1.62
LSM10-201ENST00000315732 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
LSM10-201ENST00000315732 RAPGEF2Q9Y4G8 1499 aa25.16■■□□□ 1.62
LSM10-201ENST00000315732 IQGAP2Q13576 1575 aa25.14■■□□□ 1.61
LSM10-201ENST00000315732 AEBP2Q6ZN18 517 aaPredicted RBP25.13■■□□□ 1.61
LSM10-201ENST00000315732 KIF13AQ9H1H9 1805 aa25.13■■□□□ 1.61
LSM10-201ENST00000315732 DISP1Q96F81 1524 aa25.05■■□□□ 1.6
LSM10-201ENST00000315732 DIP2BQ9P265 1576 aa25.04■■□□□ 1.6
LSM10-201ENST00000315732 ABCC2Q92887 1545 aa25.02■■□□□ 1.6
LSM10-201ENST00000315732 UACAQ9BZF9 1416 aa25.02■■□□□ 1.6
LSM10-201ENST00000315732 UGGT2Q9NYU1 1516 aa25.02■■□□□ 1.6
LSM10-201ENST00000315732 UHRF1BP1LA0JNW5 1464 aa25.01■■□□□ 1.59
LSM10-201ENST00000315732 PLB1Q6P1J6 1458 aa24.96■■□□□ 1.59
LSM10-201ENST00000315732 ASXL2Q76L83 1435 aa24.95■■□□□ 1.59
LSM10-201ENST00000315732 PRXQ9BXM0 1461 aa24.92■■□□□ 1.58
LSM10-201ENST00000315732 KIAA0556O60303 1618 aa24.89■■□□□ 1.57
LSM10-201ENST00000315732 KDM5BQ9UGL1 1544 aa24.88■■□□□ 1.57
LSM10-201ENST00000315732 GOLGA3Q08378 1498 aa24.86■■□□□ 1.57
LSM10-201ENST00000315732 CSRNP3Q8WYN3 585 aa24.84■■□□□ 1.57
LSM10-201ENST00000315732 GLI2P10070 1586 aa24.83■■□□□ 1.57
LSM10-201ENST00000315732 KDM6BO15054 1643 aa24.82■■□□□ 1.56
LSM10-201ENST00000315732 TSPOAP1O95153 1857 aa24.81■■□□□ 1.56
LSM10-201ENST00000315732 FAM9AQ8IZU1 332 aaPredicted RBP24.79■■□□□ 1.56
LSM10-201ENST00000315732 CTTNBP2Q8WZ74 1663 aa24.78■■□□□ 1.56
LSM10-201ENST00000315732 EPRSP07814 1512 aaKnown RBP24.78■■□□□ 1.56
LSM10-201ENST00000315732 ZCCHC11Q5TAX3 1644 aaKnown RBP24.74■■□□□ 1.55
LSM10-201ENST00000315732 P3H3Q8IVL6 736 aa24.7■■□□□ 1.54
LSM10-201ENST00000315732 WDR7Q9Y4E6 1490 aa24.7■■□□□ 1.54
LSM10-201ENST00000315732 EEA1Q15075 1411 aa24.69■■□□□ 1.54
LSM10-201ENST00000315732 ABCA8O94911 1581 aa24.68■■□□□ 1.54
LSM10-201ENST00000315732 TEX14Q8IWB6 1497 aa24.67■■□□□ 1.54
LSM10-201ENST00000315732 KCNH8Q96L42 1107 aa24.67■■□□□ 1.54
LSM10-201ENST00000315732 PPRC1Q5VV67 1664 aaKnown RBP24.66■■□□□ 1.54
LSM10-201ENST00000315732 KDM4FA0A1W2PPD8 638 aa24.66■■□□□ 1.54
LSM10-201ENST00000315732 MAP3K4Q9Y6R4 1608 aa24.64■■□□□ 1.54
LSM10-201ENST00000315732 COL17A1Q9UMD9 1497 aaPredicted RBP24.61■■□□□ 1.53
LSM10-201ENST00000315732 CD109Q6YHK3 1445 aa24.6■■□□□ 1.53
LSM10-201ENST00000315732 ARID3CA6NKF2 412 aa24.57■■□□□ 1.52
LSM10-201ENST00000315732 ATP10BO94823 1461 aa24.55■■□□□ 1.52
LSM10-201ENST00000315732 MAGI3Q5TCQ9 1506 aa24.54■■□□□ 1.52
LSM10-201ENST00000315732 RANGAP1P46060 587 aaPredicted RBP24.53■■□□□ 1.52
LSM10-201ENST00000315732 SAMD9Q5K651 1589 aa24.51■■□□□ 1.51
LSM10-201ENST00000315732 CFAP43Q8NDM7 1665 aa24.47■■□□□ 1.51
LSM10-201ENST00000315732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.47■■□□□ 1.51
LSM10-201ENST00000315732 HNRNPUL2Q1KMD3 747 aaKnown RBP24.47■■□□□ 1.51
LSM10-201ENST00000315732 FHOD3Q2V2M9 1422 aa24.42■■□□□ 1.5
LSM10-201ENST00000315732 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
LSM10-201ENST00000315732 RAPGEF6Q8TEU7 1601 aa24.41■■□□□ 1.5
LSM10-201ENST00000315732 ADGRL1O94910 1474 aa24.39■■□□□ 1.5
LSM10-201ENST00000315732 KIF21BO75037 1637 aa24.38■■□□□ 1.49
LSM10-201ENST00000315732 PHLDB1Q86UU1 1377 aa24.38■■□□□ 1.49
LSM10-201ENST00000315732 PLEKHD1A6NEE1 506 aa24.37■■□□□ 1.49
LSM10-201ENST00000315732 NUP153P49790 1475 aaKnown RBP24.37■■□□□ 1.49
LSM10-201ENST00000315732 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
LSM10-201ENST00000315732 ARAP3Q8WWN8 1544 aa24.35■■□□□ 1.49
LSM10-201ENST00000315732 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
LSM10-201ENST00000315732 EFCAB5A4FU69 1503 aa24.32■■□□□ 1.48
LSM10-201ENST00000315732 EHMT2Q96KQ7 1210 aa24.31■■□□□ 1.48
LSM10-201ENST00000315732 NEO1Q92859 1461 aa24.26■■□□□ 1.47
LSM10-201ENST00000315732 RAPGEF3O95398 923 aa24.26■■□□□ 1.47
LSM10-201ENST00000315732 ATP1B4Q9UN42 357 aaPredicted RBP24.19■■□□□ 1.46
LSM10-201ENST00000315732 FMN1Q68DA7 1419 aa24.18■■□□□ 1.46
LSM10-201ENST00000315732 CDK11AQ9UQ88 783 aaPredicted RBP24.14■■□□□ 1.45
LSM10-201ENST00000315732 ARHGAP35Q9NRY4 1499 aa24.13■■□□□ 1.45
LSM10-201ENST00000315732 AKNAQ7Z591 1439 aa24.13■■□□□ 1.45
LSM10-201ENST00000315732 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.12■■□□□ 1.45
LSM10-201ENST00000315732 CDK13Q14004 1512 aaKnown RBP24.11■■□□□ 1.45
LSM10-201ENST00000315732 FANCAO15360 1455 aa24.11■■□□□ 1.45
LSM10-201ENST00000315732 DENND4BO75064 1496 aaPredicted RBP24.11■■□□□ 1.45
LSM10-201ENST00000315732 ARID4BQ4LE39 1312 aaPredicted RBP24.07■■□□□ 1.44
LSM10-201ENST00000315732 PLCH2O75038 1416 aa24.05■■□□□ 1.44
LSM10-201ENST00000315732 FRMPD1Q5SYB0 1578 aa24.04■■□□□ 1.44
LSM10-201ENST00000315732 HECW1Q76N89 1606 aa24.03■■□□□ 1.44
LSM10-201ENST00000315732 TTC37Q6PGP7 1564 aa24.03■■□□□ 1.44
LSM10-201ENST00000315732 CFAP74Q9C0B2 1584 aa24.03■■□□□ 1.44
LSM10-201ENST00000315732 EFCAB2Q5VUJ9 269 aa24.01■■□□□ 1.43
LSM10-201ENST00000315732 HECW2Q9P2P5 1572 aa24■■□□□ 1.43
LSM10-201ENST00000315732 SCAPERQ9BY12 1400 aa23.97■■□□□ 1.43
LSM10-201ENST00000315732 PTPRMP28827 1452 aa23.96■■□□□ 1.43
LSM10-201ENST00000315732 TROQ12816 1431 aaPredicted RBP23.96■■□□□ 1.43
LSM10-201ENST00000315732 MAGI2Q86UL8 1455 aa23.95■■□□□ 1.42
LSM10-201ENST00000315732 RICTORQ6R327 1708 aa23.95■■□□□ 1.42
LSM10-201ENST00000315732 ADAMTSL3P82987 1691 aa23.95■■□□□ 1.42
LSM10-201ENST00000315732 CLIP1P30622 1438 aa23.94■■□□□ 1.42
LSM10-201ENST00000315732 ARHGEF40Q8TER5 1519 aa23.92■■□□□ 1.42
LSM10-201ENST00000315732 ZMYM4Q5VZL5 1548 aa23.91■■□□□ 1.42
LSM10-201ENST00000315732 POGZQ7Z3K3 1410 aa23.91■■□□□ 1.42
LSM10-201ENST00000315732 CASKIN1Q8WXD9 1431 aa23.91■■□□□ 1.42
LSM10-201ENST00000315732 YEATS2Q9ULM3 1422 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms