RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 ADCY10Q96PN6 1610 aa21.13■□□□□ 0.97
ABCD3-201ENST00000315713 CUL7Q14999 1698 aa21.12■□□□□ 0.97
ABCD3-201ENST00000315713 JPH4Q96JJ6 628 aa21.08■□□□□ 0.97
ABCD3-201ENST00000315713 DIP2BQ9P265 1576 aa21.07■□□□□ 0.96
ABCD3-201ENST00000315713 MAPKBP1O60336 1514 aa21.06■□□□□ 0.96
ABCD3-201ENST00000315713 TSPOAP1O95153 1857 aa21.05■□□□□ 0.96
ABCD3-201ENST00000315713 ABCC10Q5T3U5 1492 aa21.02■□□□□ 0.96
ABCD3-201ENST00000315713 KIAA0586Q9BVV6 1533 aa20.99■□□□□ 0.95
ABCD3-201ENST00000315713 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
ABCD3-201ENST00000315713 IGF1RP08069 1367 aa20.95■□□□□ 0.94
ABCD3-201ENST00000315713 KDM6BO15054 1643 aa20.93■□□□□ 0.94
ABCD3-201ENST00000315713 FAM69CQ0P6D2 419 aa20.92■□□□□ 0.94
ABCD3-201ENST00000315713 NPM1P06748 294 aaKnown RBP eCLIP20.89■□□□□ 0.93
ABCD3-201ENST00000315713 IQGAP2Q13576 1575 aa20.87■□□□□ 0.93
ABCD3-201ENST00000315713 PPRC1Q5VV67 1664 aaKnown RBP20.84■□□□□ 0.93
ABCD3-201ENST00000315713 CARMIL1Q5VZK9 1371 aa20.82■□□□□ 0.92
ABCD3-201ENST00000315713 PTPRGP23470 1445 aa20.79■□□□□ 0.92
ABCD3-201ENST00000315713 ABCC2Q92887 1545 aa20.79■□□□□ 0.92
ABCD3-201ENST00000315713 CARMIL2Q6F5E8 1435 aa20.77■□□□□ 0.91
ABCD3-201ENST00000315713 TTBK1Q5TCY1 1321 aaPredicted RBP20.77■□□□□ 0.91
ABCD3-201ENST00000315713 TNIKQ9UKE5 1360 aa20.76■□□□□ 0.91
ABCD3-201ENST00000315713 DISP1Q96F81 1524 aa20.73■□□□□ 0.91
ABCD3-201ENST00000315713 GLI2P10070 1586 aa20.73■□□□□ 0.91
ABCD3-201ENST00000315713 CTTNBP2Q8WZ74 1663 aa20.73■□□□□ 0.91
ABCD3-201ENST00000315713 ASXL2Q76L83 1435 aa20.72■□□□□ 0.91
ABCD3-201ENST00000315713 ZCCHC11Q5TAX3 1644 aaKnown RBP20.72■□□□□ 0.91
ABCD3-201ENST00000315713 UHRF1BP1LA0JNW5 1464 aa20.71■□□□□ 0.91
ABCD3-201ENST00000315713 KIAA0556O60303 1618 aa20.71■□□□□ 0.91
ABCD3-201ENST00000315713 MAP3K4Q9Y6R4 1608 aa20.7■□□□□ 0.9
ABCD3-201ENST00000315713 PLB1Q6P1J6 1458 aa20.69■□□□□ 0.9
ABCD3-201ENST00000315713 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
ABCD3-201ENST00000315713 UACAQ9BZF9 1416 aa20.67■□□□□ 0.9
ABCD3-201ENST00000315713 RAPGEF2Q9Y4G8 1499 aa20.66■□□□□ 0.9
ABCD3-201ENST00000315713 KDM4FA0A1W2PPD8 638 aa20.65■□□□□ 0.9
ABCD3-201ENST00000315713 KDM5BQ9UGL1 1544 aa20.63■□□□□ 0.89
ABCD3-201ENST00000315713 EPRSP07814 1512 aaKnown RBP20.62■□□□□ 0.89
ABCD3-201ENST00000315713 ADGRL1O94910 1474 aa20.56■□□□□ 0.88
ABCD3-201ENST00000315713 COL17A1Q9UMD9 1497 aaPredicted RBP20.55■□□□□ 0.88
ABCD3-201ENST00000315713 TEX14Q8IWB6 1497 aa20.54■□□□□ 0.88
ABCD3-201ENST00000315713 CFAP43Q8NDM7 1665 aa20.51■□□□□ 0.87
ABCD3-201ENST00000315713 WDR7Q9Y4E6 1490 aa20.51■□□□□ 0.87
ABCD3-201ENST00000315713 ABCA8O94911 1581 aa20.5■□□□□ 0.87
ABCD3-201ENST00000315713 GOLGA3Q08378 1498 aa20.45■□□□□ 0.86
ABCD3-201ENST00000315713 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
ABCD3-201ENST00000315713 HECW2Q9P2P5 1572 aa20.4■□□□□ 0.86
ABCD3-201ENST00000315713 KIF21BO75037 1637 aa20.39■□□□□ 0.86
ABCD3-201ENST00000315713 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
ABCD3-201ENST00000315713 MAGI3Q5TCQ9 1506 aa20.37■□□□□ 0.85
ABCD3-201ENST00000315713 CD109Q6YHK3 1445 aa20.35■□□□□ 0.85
ABCD3-201ENST00000315713 SAMD9Q5K651 1589 aa20.31■□□□□ 0.84
ABCD3-201ENST00000315713 ABCA9Q8IUA7 1624 aa20.29■□□□□ 0.84
ABCD3-201ENST00000315713 KCNH8Q96L42 1107 aa20.29■□□□□ 0.84
ABCD3-201ENST00000315713 RAPGEF6Q8TEU7 1601 aa20.28■□□□□ 0.84
ABCD3-201ENST00000315713 ATP10BO94823 1461 aa20.24■□□□□ 0.83
ABCD3-201ENST00000315713 ARID3CA6NKF2 412 aa20.24■□□□□ 0.83
ABCD3-201ENST00000315713 ARAP3Q8WWN8 1544 aa20.22■□□□□ 0.83
ABCD3-201ENST00000315713 ILDR1Q86SU0 546 aaPredicted RBP20.22■□□□□ 0.83
ABCD3-201ENST00000315713 P3H3Q8IVL6 736 aa20.2■□□□□ 0.82
ABCD3-201ENST00000315713 FRMPD1Q5SYB0 1578 aa20.19■□□□□ 0.82
ABCD3-201ENST00000315713 ADAMTSL3P82987 1691 aa20.17■□□□□ 0.82
ABCD3-201ENST00000315713 EEA1Q15075 1411 aa20.17■□□□□ 0.82
ABCD3-201ENST00000315713 BCORL1Q5H9F3 1711 aa20.13■□□□□ 0.81
ABCD3-201ENST00000315713 NUP153P49790 1475 aaKnown RBP20.13■□□□□ 0.81
ABCD3-201ENST00000315713 FAM9AQ8IZU1 332 aaPredicted RBP20.13■□□□□ 0.81
ABCD3-201ENST00000315713 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
ABCD3-201ENST00000315713 RICTORQ6R327 1708 aa20.11■□□□□ 0.81
ABCD3-201ENST00000315713 NEO1Q92859 1461 aa20.11■□□□□ 0.81
ABCD3-201ENST00000315713 FHOD3Q2V2M9 1422 aa20.1■□□□□ 0.81
ABCD3-201ENST00000315713 MADDQ8WXG6 1647 aa20.09■□□□□ 0.81
ABCD3-201ENST00000315713 ARHGEF40Q8TER5 1519 aa20.09■□□□□ 0.81
ABCD3-201ENST00000315713 CFAP74Q9C0B2 1584 aa20.07■□□□□ 0.8
ABCD3-201ENST00000315713 PHLDB1Q86UU1 1377 aa20.07■□□□□ 0.8
ABCD3-201ENST00000315713 TTC37Q6PGP7 1564 aa20.06■□□□□ 0.8
ABCD3-201ENST00000315713 PTPRMP28827 1452 aa20.05■□□□□ 0.8
ABCD3-201ENST00000315713 RIMS1Q86UR5 1692 aaKnown RBP20.05■□□□□ 0.8
ABCD3-201ENST00000315713 RAPGEF3O95398 923 aa20.04■□□□□ 0.8
ABCD3-201ENST00000315713 EFCAB5A4FU69 1503 aa20.02■□□□□ 0.8
ABCD3-201ENST00000315713 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.02■□□□□ 0.8
ABCD3-201ENST00000315713 RANGAP1P46060 587 aaPredicted RBP20.02■□□□□ 0.8
ABCD3-201ENST00000315713 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.8
ABCD3-201ENST00000315713 SIGLEC1Q9BZZ2 1709 aa20.02■□□□□ 0.79
ABCD3-201ENST00000315713 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.01■□□□□ 0.79
ABCD3-201ENST00000315713 PCF11O94913 1555 aaKnown RBP19.97■□□□□ 0.79
ABCD3-201ENST00000315713 CDK13Q14004 1512 aaKnown RBP19.97■□□□□ 0.79
ABCD3-201ENST00000315713 ZMYM4Q5VZL5 1548 aa19.97■□□□□ 0.79
ABCD3-201ENST00000315713 FANCAO15360 1455 aa19.96■□□□□ 0.79
ABCD3-201ENST00000315713 DENND4BO75064 1496 aaPredicted RBP19.95■□□□□ 0.78
ABCD3-201ENST00000315713 FER1L4A9Z1Z3 1794 aa19.95■□□□□ 0.78
ABCD3-201ENST00000315713 MYO5CQ9NQX4 1742 aa19.93■□□□□ 0.78
ABCD3-201ENST00000315713 AKNAQ7Z591 1439 aa19.93■□□□□ 0.78
ABCD3-201ENST00000315713 LMTK3Q96Q04 1460 aa19.92■□□□□ 0.78
ABCD3-201ENST00000315713 ZFYVE16Q7Z3T8 1539 aa19.92■□□□□ 0.78
ABCD3-201ENST00000315713 ARID4BQ4LE39 1312 aaPredicted RBP19.9■□□□□ 0.78
ABCD3-201ENST00000315713 HECW1Q76N89 1606 aa19.89■□□□□ 0.77
ABCD3-201ENST00000315713 LRRIQ1Q96JM4 1722 aa19.89■□□□□ 0.77
ABCD3-201ENST00000315713 EHMT2Q96KQ7 1210 aa19.89■□□□□ 0.77
ABCD3-201ENST00000315713 PLEKHD1A6NEE1 506 aa19.87■□□□□ 0.77
ABCD3-201ENST00000315713 YEATS2Q9ULM3 1422 aa19.86■□□□□ 0.77
ABCD3-201ENST00000315713 KIF14Q15058 1648 aa19.86■□□□□ 0.77
ABCD3-201ENST00000315713 UBTFP17480 764 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms