RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 TDRD9Q8NDG6 1382 aaKnown RBP23.35■■□□□ 1.33
TSC22D3-201ENST00000315660 GAPVD1Q14C86 1478 aa23.33■■□□□ 1.32
TSC22D3-201ENST00000315660 EFCAB5A4FU69 1503 aa23.32■■□□□ 1.32
TSC22D3-201ENST00000315660 CTTNBP2Q8WZ74 1663 aa23.32■■□□□ 1.32
TSC22D3-201ENST00000315660 CCNB3Q8WWL7 1395 aa23.31■■□□□ 1.32
TSC22D3-201ENST00000315660 P3H3Q8IVL6 736 aa23.3■■□□□ 1.32
TSC22D3-201ENST00000315660 PCF11O94913 1555 aaKnown RBP23.29■■□□□ 1.32
TSC22D3-201ENST00000315660 FHOD3Q2V2M9 1422 aa23.28■■□□□ 1.32
TSC22D3-201ENST00000315660 LRRC9Q6ZRR7 1453 aa23.28■■□□□ 1.32
TSC22D3-201ENST00000315660 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
TSC22D3-201ENST00000315660 CFAP43Q8NDM7 1665 aa23.24■■□□□ 1.31
TSC22D3-201ENST00000315660 FYCO1Q9BQS8 1478 aa23.22■■□□□ 1.31
TSC22D3-201ENST00000315660 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.31
TSC22D3-201ENST00000315660 CASKIN1Q8WXD9 1431 aa23.2■■□□□ 1.3
TSC22D3-201ENST00000315660 DHX57Q6P158 1386 aaKnown RBP23.19■■□□□ 1.3
TSC22D3-201ENST00000315660 CLSPNQ9HAW4 1339 aa23.19■■□□□ 1.3
TSC22D3-201ENST00000315660 MRC2Q9UBG0 1479 aa23.18■■□□□ 1.3
TSC22D3-201ENST00000315660 DIEXFQ68CQ4 756 aaKnown RBP23.18■■□□□ 1.3
TSC22D3-201ENST00000315660 ZNF316A6NFI3 1004 aaPredicted RBP23.16■■□□□ 1.3
TSC22D3-201ENST00000315660 ATP1B4Q9UN42 357 aaPredicted RBP23.16■■□□□ 1.3
TSC22D3-201ENST00000315660 PHLDB1Q86UU1 1377 aa23.15■■□□□ 1.3
TSC22D3-201ENST00000315660 FMN1Q68DA7 1419 aa23.15■■□□□ 1.3
TSC22D3-201ENST00000315660 SAMD9Q5K651 1589 aa23.14■■□□□ 1.29
TSC22D3-201ENST00000315660 ITGAEP38570 1179 aa23.1■■□□□ 1.29
TSC22D3-201ENST00000315660 SNAPC4Q5SXM2 1469 aa23.1■■□□□ 1.29
TSC22D3-201ENST00000315660 PBRM1Q86U86 1689 aa23.1■■□□□ 1.29
TSC22D3-201ENST00000315660 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
TSC22D3-201ENST00000315660 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
TSC22D3-201ENST00000315660 WDR62O43379 1518 aa23.01■■□□□ 1.27
TSC22D3-201ENST00000315660 GRIN2BQ13224 1484 aa23.01■■□□□ 1.27
TSC22D3-201ENST00000315660 RAB3GAP2Q9H2M9 1393 aa23■■□□□ 1.27
TSC22D3-201ENST00000315660 FAM50AQ14320 339 aaKnown RBP23■■□□□ 1.27
TSC22D3-201ENST00000315660 IFT140Q96RY7 1462 aa23■■□□□ 1.27
TSC22D3-201ENST00000315660 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
TSC22D3-201ENST00000315660 SETD5Q9C0A6 1442 aa22.97■■□□□ 1.27
TSC22D3-201ENST00000315660 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
TSC22D3-201ENST00000315660 CENPBP07199 599 aaPredicted RBP22.95■■□□□ 1.26
TSC22D3-201ENST00000315660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.95■■□□□ 1.26
TSC22D3-201ENST00000315660 ZNF608Q9ULD9 1512 aaPredicted RBP22.95■■□□□ 1.26
TSC22D3-201ENST00000315660 LRRIQ1Q96JM4 1722 aa22.95■■□□□ 1.26
TSC22D3-201ENST00000315660 IQGAP2Q13576 1575 aa22.94■■□□□ 1.26
TSC22D3-201ENST00000315660 MTUS2Q5JR59 1369 aa22.94■■□□□ 1.26
TSC22D3-201ENST00000315660 FGD6Q6ZV73 1430 aa22.9■■□□□ 1.26
TSC22D3-201ENST00000315660 MAPKBP1O60336 1514 aa22.86■■□□□ 1.25
TSC22D3-201ENST00000315660 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
TSC22D3-201ENST00000315660 EHBP1L1Q8N3D4 1523 aa22.85■■□□□ 1.25
TSC22D3-201ENST00000315660 NCOA2Q15596 1464 aa22.84■■□□□ 1.25
TSC22D3-201ENST00000315660 CCDC18Q5T9S5 1454 aa22.83■■□□□ 1.25
TSC22D3-201ENST00000315660 UGGT2Q9NYU1 1516 aa22.83■■□□□ 1.25
TSC22D3-201ENST00000315660 SUPT6HQ7KZ85 1726 aaKnown RBP22.82■■□□□ 1.24
TSC22D3-201ENST00000315660 EIF4G3O43432 1585 aaKnown RBP22.81■■□□□ 1.24
TSC22D3-201ENST00000315660 HECW1Q76N89 1606 aa22.81■■□□□ 1.24
TSC22D3-201ENST00000315660 MYOM3Q5VTT5 1437 aa22.81■■□□□ 1.24
TSC22D3-201ENST00000315660 GTF3C3Q9Y5Q9 886 aa22.8■■□□□ 1.24
TSC22D3-201ENST00000315660 MAGI3Q5TCQ9 1506 aa22.79■■□□□ 1.24
TSC22D3-201ENST00000315660 KIAA0586Q9BVV6 1533 aa22.78■■□□□ 1.24
TSC22D3-201ENST00000315660 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
TSC22D3-201ENST00000315660 GRIN2AQ12879 1464 aa22.76■■□□□ 1.23
TSC22D3-201ENST00000315660 EPRSP07814 1512 aaKnown RBP22.75■■□□□ 1.23
TSC22D3-201ENST00000315660 PTPRKQ15262 1439 aa22.72■■□□□ 1.23
TSC22D3-201ENST00000315660 MIER1Q8N108 512 aa22.72■■□□□ 1.23
TSC22D3-201ENST00000315660 DISP1Q96F81 1524 aa22.7■■□□□ 1.23
TSC22D3-201ENST00000315660 MAGI1Q96QZ7 1491 aaPredicted RBP22.7■■□□□ 1.22
TSC22D3-201ENST00000315660 KIAA0556O60303 1618 aa22.7■■□□□ 1.22
TSC22D3-201ENST00000315660 CDK13Q14004 1512 aaKnown RBP22.69■■□□□ 1.22
TSC22D3-201ENST00000315660 HFM1A2PYH4 1435 aa22.69■■□□□ 1.22
TSC22D3-201ENST00000315660 PTPN23Q9H3S7 1636 aa22.69■■□□□ 1.22
TSC22D3-201ENST00000315660 SYNJ2O15056 1496 aa22.64■■□□□ 1.22
TSC22D3-201ENST00000315660 TCOF1Q13428 1488 aaKnown RBP22.64■■□□□ 1.22
TSC22D3-201ENST00000315660 SIN3AQ96ST3 1273 aa22.64■■□□□ 1.21
TSC22D3-201ENST00000315660 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
TSC22D3-201ENST00000315660 NAIPQ13075 1403 aa22.62■■□□□ 1.21
TSC22D3-201ENST00000315660 ARID3CA6NKF2 412 aa22.6■■□□□ 1.21
TSC22D3-201ENST00000315660 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
TSC22D3-201ENST00000315660 TIMELESSQ9UNS1 1208 aa22.6■■□□□ 1.21
TSC22D3-201ENST00000315660 MIA2Q96PC5 1412 aa22.58■■□□□ 1.21
TSC22D3-201ENST00000315660 UACAQ9BZF9 1416 aa22.58■■□□□ 1.21
TSC22D3-201ENST00000315660 NUP153P49790 1475 aaKnown RBP22.58■■□□□ 1.2
TSC22D3-201ENST00000315660 RAPGEF6Q8TEU7 1601 aa22.57■■□□□ 1.2
TSC22D3-201ENST00000315660 NUP160Q12769 1436 aa22.53■■□□□ 1.2
TSC22D3-201ENST00000315660 FBLN2P98095 1184 aa22.53■■□□□ 1.2
TSC22D3-201ENST00000315660 YTHDC1Q96MU7 727 aaKnown RBP22.51■■□□□ 1.19
TSC22D3-201ENST00000315660 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
TSC22D3-201ENST00000315660 GCC2Q8IWJ2 1684 aa22.48■■□□□ 1.19
TSC22D3-201ENST00000315660 RRP7BPQ9NSQ0 103 aa22.47■■□□□ 1.19
TSC22D3-201ENST00000315660 CHIC2Q9UKJ5 165 aa22.47■■□□□ 1.19
TSC22D3-201ENST00000315660 CDK11AQ9UQ88 783 aaPredicted RBP22.47■■□□□ 1.19
TSC22D3-201ENST00000315660 JPH4Q96JJ6 628 aa22.46■■□□□ 1.19
TSC22D3-201ENST00000315660 CARMIL2Q6F5E8 1435 aa22.46■■□□□ 1.19
TSC22D3-201ENST00000315660 PPP1R15AO75807 674 aaPredicted RBP22.45■■□□□ 1.18
TSC22D3-201ENST00000315660 PLB1Q6P1J6 1458 aa22.44■■□□□ 1.18
TSC22D3-201ENST00000315660 TROQ12816 1431 aaPredicted RBP22.41■■□□□ 1.18
TSC22D3-201ENST00000315660 TONSLQ96HA7 1378 aa22.41■■□□□ 1.18
TSC22D3-201ENST00000315660 PRG4Q92954 1404 aaPredicted RBP22.39■■□□□ 1.17
TSC22D3-201ENST00000315660 DAPK1P53355 1430 aa22.39■■□□□ 1.17
TSC22D3-201ENST00000315660 KDM6BO15054 1643 aa22.38■■□□□ 1.17
TSC22D3-201ENST00000315660 DNMT1P26358 1616 aaKnown RBP22.36■■□□□ 1.17
TSC22D3-201ENST00000315660 ROCK1Q13464 1354 aa22.36■■□□□ 1.17
TSC22D3-201ENST00000315660 ABCC5O15440 1437 aa22.36■■□□□ 1.17
TSC22D3-201ENST00000315660 ZNF644Q9H582 1327 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms