RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 EFCAB5A4FU69 1503 aa28.8■■■□□ 2.2
CD55-201ENST00000314754 FHAD1B1AJZ9 1412 aa28.79■■■□□ 2.2
CD55-201ENST00000314754 TIAM1Q13009 1591 aa28.74■■■□□ 2.19
CD55-201ENST00000314754 P3H3Q8IVL6 736 aa28.73■■■□□ 2.19
CD55-201ENST00000314754 RRBP1Q9P2E9 1410 aaKnown RBP28.72■■■□□ 2.19
CD55-201ENST00000314754 PCF11O94913 1555 aaKnown RBP28.71■■■□□ 2.19
CD55-201ENST00000314754 PBRM1Q86U86 1689 aa28.71■■■□□ 2.19
CD55-201ENST00000314754 FHOD3Q2V2M9 1422 aa28.7■■■□□ 2.19
CD55-201ENST00000314754 CFAP43Q8NDM7 1665 aa28.63■■■□□ 2.17
CD55-201ENST00000314754 WDR62O43379 1518 aa28.63■■■□□ 2.17
CD55-201ENST00000314754 AQRO60306 1485 aaKnown RBP eCLIP28.62■■■□□ 2.173e-7■■■■□ 25.8
CD55-201ENST00000314754 FYCO1Q9BQS8 1478 aa28.62■■■□□ 2.17
CD55-201ENST00000314754 LRRC9Q6ZRR7 1453 aa28.61■■■□□ 2.17
CD55-201ENST00000314754 CCNB3Q8WWL7 1395 aa28.58■■■□□ 2.17
CD55-201ENST00000314754 CASKIN1Q8WXD9 1431 aa28.58■■■□□ 2.17
CD55-201ENST00000314754 SAMD9Q5K651 1589 aa28.58■■■□□ 2.16
CD55-201ENST00000314754 IFT140Q96RY7 1462 aa28.57■■■□□ 2.16
CD55-201ENST00000314754 FMN1Q68DA7 1419 aa28.56■■■□□ 2.16
CD55-201ENST00000314754 ADAMTS12P58397 1594 aa28.53■■■□□ 2.16
CD55-201ENST00000314754 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
CD55-201ENST00000314754 ZNF608Q9ULD9 1512 aaPredicted RBP28.52■■■□□ 2.16
CD55-201ENST00000314754 ATP1B4Q9UN42 357 aaPredicted RBP28.49■■■□□ 2.15
CD55-201ENST00000314754 SNAPC4Q5SXM2 1469 aa28.47■■■□□ 2.15
CD55-201ENST00000314754 ERCC6Q03468 1493 aa28.45■■■□□ 2.15
CD55-201ENST00000314754 LRRIQ1Q96JM4 1722 aa28.45■■■□□ 2.14
CD55-201ENST00000314754 THOC2Q8NI27 1593 aaKnown RBP28.43■■■□□ 2.14
CD55-201ENST00000314754 PHLDB1Q86UU1 1377 aa28.43■■■□□ 2.14
CD55-201ENST00000314754 IQGAP2Q13576 1575 aa28.39■■■□□ 2.14
CD55-201ENST00000314754 EIF4G3O43432 1585 aaKnown RBP28.38■■■□□ 2.13
CD55-201ENST00000314754 CLSPNQ9HAW4 1339 aa28.36■■■□□ 2.13
CD55-201ENST00000314754 ITGAEP38570 1179 aa28.34■■■□□ 2.13
CD55-201ENST00000314754 DHX57Q6P158 1386 aaKnown RBP28.33■■■□□ 2.13
CD55-201ENST00000314754 UGGT2Q9NYU1 1516 aa28.25■■■□□ 2.11
CD55-201ENST00000314754 MTUS2Q5JR59 1369 aa28.24■■■□□ 2.11
CD55-201ENST00000314754 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.23■■■□□ 2.114e-6■■□□□ 11.8
CD55-201ENST00000314754 KIAA0586Q9BVV6 1533 aa28.21■■■□□ 2.11
CD55-201ENST00000314754 GRIN2AQ12879 1464 aa28.2■■■□□ 2.11
CD55-201ENST00000314754 MAGI1Q96QZ7 1491 aaPredicted RBP28.2■■■□□ 2.1
CD55-201ENST00000314754 FAM50AQ14320 339 aaKnown RBP28.19■■■□□ 2.1
CD55-201ENST00000314754 CCDC18Q5T9S5 1454 aa28.19■■■□□ 2.1
CD55-201ENST00000314754 HECW1Q76N89 1606 aa28.17■■■□□ 2.1
CD55-201ENST00000314754 EHBP1L1Q8N3D4 1523 aa28.17■■■□□ 2.1
CD55-201ENST00000314754 RAB3GAP2Q9H2M9 1393 aa28.16■■■□□ 2.1
CD55-201ENST00000314754 FGD6Q6ZV73 1430 aa28.15■■■□□ 2.1
CD55-201ENST00000314754 SETD5Q9C0A6 1442 aa28.14■■■□□ 2.09
CD55-201ENST00000314754 MAGI3Q5TCQ9 1506 aa28.13■■■□□ 2.09
CD55-201ENST00000314754 ZNF316A6NFI3 1004 aaPredicted RBP28.12■■■□□ 2.09
CD55-201ENST00000314754 SUPT6HQ7KZ85 1726 aaKnown RBP28.12■■■□□ 2.09
CD55-201ENST00000314754 NCOA2Q15596 1464 aa28.11■■■□□ 2.09
CD55-201ENST00000314754 SYNJ2O15056 1496 aa28.1■■■□□ 2.09
CD55-201ENST00000314754 DIEXFQ68CQ4 756 aaKnown RBP28.09■■■□□ 2.09
CD55-201ENST00000314754 KIAA0556O60303 1618 aa28.08■■■□□ 2.09
CD55-201ENST00000314754 DISP1Q96F81 1524 aa28.07■■■□□ 2.08
CD55-201ENST00000314754 EPRSP07814 1512 aaKnown RBP28.07■■■□□ 2.08
CD55-201ENST00000314754 MYOM3Q5VTT5 1437 aa28.06■■■□□ 2.08
CD55-201ENST00000314754 CEP170Q5SW79 1584 aa28.06■■■□□ 2.08
CD55-201ENST00000314754 ARHGEF11O15085 1522 aa28.05■■■□□ 2.08
CD55-201ENST00000314754 CDK13Q14004 1512 aaKnown RBP28.04■■■□□ 2.08
CD55-201ENST00000314754 CHMP7Q8WUX9 453 aaPredicted RBP28.02■■■□□ 2.08
CD55-201ENST00000314754 MAPKBP1O60336 1514 aa27.99■■■□□ 2.07
CD55-201ENST00000314754 ARID3CA6NKF2 412 aa27.96■■■□□ 2.07
CD55-201ENST00000314754 NUP160Q12769 1436 aa27.95■■■□□ 2.06
CD55-201ENST00000314754 FBLN2P98095 1184 aa27.94■■■□□ 2.06
CD55-201ENST00000314754 PTPN23Q9H3S7 1636 aa27.93■■■□□ 2.06
CD55-201ENST00000314754 PTPRKQ15262 1439 aa27.92■■■□□ 2.06
CD55-201ENST00000314754 RAPGEF6Q8TEU7 1601 aa27.9■■■□□ 2.06
CD55-201ENST00000314754 NUP153P49790 1475 aaKnown RBP27.88■■■□□ 2.05
CD55-201ENST00000314754 HFM1A2PYH4 1435 aa27.87■■■□□ 2.05
CD55-201ENST00000314754 TCOF1Q13428 1488 aaKnown RBP27.87■■■□□ 2.05
CD55-201ENST00000314754 MIA2Q96PC5 1412 aa27.83■■■□□ 2.05
CD55-201ENST00000314754 CARMIL2Q6F5E8 1435 aa27.83■■■□□ 2.04
CD55-201ENST00000314754 JPH4Q96JJ6 628 aa27.79■■■□□ 2.04
CD55-201ENST00000314754 NAIPQ13075 1403 aa27.76■■■□□ 2.04
CD55-201ENST00000314754 PLB1Q6P1J6 1458 aa27.76■■■□□ 2.04
CD55-201ENST00000314754 CDK11AQ9UQ88 783 aaPredicted RBP27.75■■■□□ 2.03
CD55-201ENST00000314754 UACAQ9BZF9 1416 aa27.71■■■□□ 2.03
CD55-201ENST00000314754 PELP1Q8IZL8 1130 aaKnown RBP27.71■■■□□ 2.03
CD55-201ENST00000314754 SIN3AQ96ST3 1273 aa27.69■■■□□ 2.02
CD55-201ENST00000314754 AKNAQ7Z591 1439 aa27.69■■■□□ 2.02
CD55-201ENST00000314754 CHD1O14646 1710 aa27.69■■■□□ 2.02
CD55-201ENST00000314754 TROQ12816 1431 aaPredicted RBP27.67■■■□□ 2.02
CD55-201ENST00000314754 TIMELESSQ9UNS1 1208 aa27.66■■■□□ 2.02
CD55-201ENST00000314754 GCC2Q8IWJ2 1684 aa27.66■■■□□ 2.02
CD55-201ENST00000314754 PRG4Q92954 1404 aaPredicted RBP27.64■■■□□ 2.01
CD55-201ENST00000314754 CHIC2Q9UKJ5 165 aa27.63■■■□□ 2.01
CD55-201ENST00000314754 NEUROD1Q13562 356 aa27.63■■■□□ 2.01
CD55-201ENST00000314754 ABCA8O94911 1581 aa27.62■■■□□ 2.01
CD55-201ENST00000314754 RRP7BPQ9NSQ0 103 aa27.6■■■□□ 2.01
CD55-201ENST00000314754 KIF14Q15058 1648 aa27.6■■■□□ 2.01
CD55-201ENST00000314754 KDM6BO15054 1643 aa27.6■■■□□ 2.01
CD55-201ENST00000314754 ADCY10Q96PN6 1610 aa27.6■■■□□ 2.01
CD55-201ENST00000314754 DNMT1P26358 1616 aaKnown RBP27.56■■■□□ 2
CD55-201ENST00000314754 MIER1Q8N108 512 aa27.56■■■□□ 2
CD55-201ENST00000314754 ITSN2Q9NZM3 1697 aa27.55■■■□□ 2
CD55-201ENST00000314754 DAPK1P53355 1430 aa27.55■■■□□ 2
CD55-201ENST00000314754 ZNF644Q9H582 1327 aaPredicted RBP27.54■■■□□ 2
CD55-201ENST00000314754 ROCK1Q13464 1354 aa27.52■■■□□ 2
CD55-201ENST00000314754 ABCC5O15440 1437 aa27.5■■□□□ 1.99
CD55-201ENST00000314754 GPATCH8Q9UKJ3 1502 aaKnown RBP27.49■■□□□ 1.99
CD55-201ENST00000314754 ATP10BO94823 1461 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms