RNA–Protein interactions for RNA: ENST00000312216.12

MCTP1-201, Transcript of multiple C2 and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCTP1, Length 2,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCTP1-201ENST00000312216 KANK4Q5T7N3 995 aaPredicted RBP13.84□□□□□ -0.19
MCTP1-201ENST00000312216 GAPVD1Q14C86 1478 aa13.83□□□□□ -0.2
MCTP1-201ENST00000312216 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.2
MCTP1-201ENST00000312216 FYCO1Q9BQS8 1478 aa13.83□□□□□ -0.2
MCTP1-201ENST00000312216 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
MCTP1-201ENST00000312216 CCNB3Q8WWL7 1395 aa13.81□□□□□ -0.2
MCTP1-201ENST00000312216 LRRC9Q6ZRR7 1453 aa13.8□□□□□ -0.2
MCTP1-201ENST00000312216 MRC2Q9UBG0 1479 aa13.79□□□□□ -0.2
MCTP1-201ENST00000312216 CLSPNQ9HAW4 1339 aa13.79□□□□□ -0.2
MCTP1-201ENST00000312216 SAMD9Q5K651 1589 aa13.78□□□□□ -0.2
MCTP1-201ENST00000312216 CASKIN1Q8WXD9 1431 aa13.77□□□□□ -0.2
MCTP1-201ENST00000312216 FHOD3Q2V2M9 1422 aa13.77□□□□□ -0.21
MCTP1-201ENST00000312216 FMN1Q68DA7 1419 aa13.77□□□□□ -0.21
MCTP1-201ENST00000312216 PBRM1Q86U86 1689 aa13.76□□□□□ -0.21
MCTP1-201ENST00000312216 TDRD9Q8NDG6 1382 aaKnown RBP13.76□□□□□ -0.21
MCTP1-201ENST00000312216 THOC2Q8NI27 1593 aaKnown RBP13.74□□□□□ -0.21
MCTP1-201ENST00000312216 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
MCTP1-201ENST00000312216 ADAMTS12P58397 1594 aa13.72□□□□□ -0.21
MCTP1-201ENST00000312216 SNAPC4Q5SXM2 1469 aa13.72□□□□□ -0.21
MCTP1-201ENST00000312216 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
MCTP1-201ENST00000312216 WDR62O43379 1518 aa13.71□□□□□ -0.21
MCTP1-201ENST00000312216 IFT140Q96RY7 1462 aa13.69□□□□□ -0.22
MCTP1-201ENST00000312216 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
MCTP1-201ENST00000312216 PHLDB1Q86UU1 1377 aa13.67□□□□□ -0.22
MCTP1-201ENST00000312216 ZNF316A6NFI3 1004 aaPredicted RBP13.67□□□□□ -0.22
MCTP1-201ENST00000312216 P3H3Q8IVL6 736 aa13.66□□□□□ -0.22
MCTP1-201ENST00000312216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.66□□□□□ -0.22
MCTP1-201ENST00000312216 DIEXFQ68CQ4 756 aaKnown RBP13.65□□□□□ -0.22
MCTP1-201ENST00000312216 IQGAP2Q13576 1575 aa13.65□□□□□ -0.22
MCTP1-201ENST00000312216 EHBP1L1Q8N3D4 1523 aa13.63□□□□□ -0.23
MCTP1-201ENST00000312216 CCDC18Q5T9S5 1454 aa13.62□□□□□ -0.23
MCTP1-201ENST00000312216 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
MCTP1-201ENST00000312216 SETD5Q9C0A6 1442 aa13.6□□□□□ -0.23
MCTP1-201ENST00000312216 LRRIQ1Q96JM4 1722 aa13.6□□□□□ -0.23
MCTP1-201ENST00000312216 RAB3GAP2Q9H2M9 1393 aa13.6□□□□□ -0.23
MCTP1-201ENST00000312216 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
MCTP1-201ENST00000312216 ATP1B4Q9UN42 357 aaPredicted RBP13.59□□□□□ -0.23
MCTP1-201ENST00000312216 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
MCTP1-201ENST00000312216 UGGT2Q9NYU1 1516 aa13.59□□□□□ -0.23
MCTP1-201ENST00000312216 FGD6Q6ZV73 1430 aa13.58□□□□□ -0.24
MCTP1-201ENST00000312216 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.24
MCTP1-201ENST00000312216 ZNF608Q9ULD9 1512 aaPredicted RBP13.55□□□□□ -0.24
MCTP1-201ENST00000312216 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
MCTP1-201ENST00000312216 ITGAEP38570 1179 aa13.55□□□□□ -0.24
MCTP1-201ENST00000312216 AEBP2Q6ZN18 517 aaPredicted RBP13.55□□□□□ -0.24
MCTP1-201ENST00000312216 FAM50AQ14320 339 aaKnown RBP13.55□□□□□ -0.24
MCTP1-201ENST00000312216 MAPKBP1O60336 1514 aa13.54□□□□□ -0.24
MCTP1-201ENST00000312216 NCOA2Q15596 1464 aa13.54□□□□□ -0.24
MCTP1-201ENST00000312216 MYOM3Q5VTT5 1437 aa13.54□□□□□ -0.24
MCTP1-201ENST00000312216 ARHGEF11O15085 1522 aa13.53□□□□□ -0.24
MCTP1-201ENST00000312216 KIAA0586Q9BVV6 1533 aa13.53□□□□□ -0.24
MCTP1-201ENST00000312216 MAGI1Q96QZ7 1491 aaPredicted RBP13.52□□□□□ -0.24
MCTP1-201ENST00000312216 KIAA0556O60303 1618 aa13.51□□□□□ -0.25
MCTP1-201ENST00000312216 GRIN2AQ12879 1464 aa13.51□□□□□ -0.25
MCTP1-201ENST00000312216 EPRSP07814 1512 aaKnown RBP13.49□□□□□ -0.25
MCTP1-201ENST00000312216 PTPN23Q9H3S7 1636 aa13.48□□□□□ -0.25
MCTP1-201ENST00000312216 MAGI3Q5TCQ9 1506 aa13.48□□□□□ -0.25
MCTP1-201ENST00000312216 TCOF1Q13428 1488 aaKnown RBP13.47□□□□□ -0.25
MCTP1-201ENST00000312216 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
MCTP1-201ENST00000312216 SYNJ2O15056 1496 aa13.46□□□□□ -0.26
MCTP1-201ENST00000312216 DISP1Q96F81 1524 aa13.46□□□□□ -0.26
MCTP1-201ENST00000312216 CENPBP07199 599 aaPredicted RBP13.45□□□□□ -0.26
MCTP1-201ENST00000312216 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
MCTP1-201ENST00000312216 MIA2Q96PC5 1412 aa13.43□□□□□ -0.26
MCTP1-201ENST00000312216 RAPGEF6Q8TEU7 1601 aa13.43□□□□□ -0.26
MCTP1-201ENST00000312216 AKNAQ7Z591 1439 aa13.42□□□□□ -0.26
MCTP1-201ENST00000312216 GCC2Q8IWJ2 1684 aa13.42□□□□□ -0.26
MCTP1-201ENST00000312216 CEP170Q5SW79 1584 aa13.42□□□□□ -0.26
MCTP1-201ENST00000312216 TIMELESSQ9UNS1 1208 aa13.41□□□□□ -0.26
MCTP1-201ENST00000312216 UACAQ9BZF9 1416 aa13.4□□□□□ -0.26
MCTP1-201ENST00000312216 ACIN1Q9UKV3 1341 aaKnown RBP13.4□□□□□ -0.26
MCTP1-201ENST00000312216 PTPRKQ15262 1439 aa13.4□□□□□ -0.27
MCTP1-201ENST00000312216 NUP160Q12769 1436 aa13.39□□□□□ -0.27
MCTP1-201ENST00000312216 NAIPQ13075 1403 aa13.39□□□□□ -0.27
MCTP1-201ENST00000312216 NUP153P49790 1475 aaKnown RBP13.38□□□□□ -0.27
MCTP1-201ENST00000312216 CARMIL2Q6F5E8 1435 aa13.35□□□□□ -0.27
MCTP1-201ENST00000312216 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
MCTP1-201ENST00000312216 CHMP7Q8WUX9 453 aaPredicted RBP13.34□□□□□ -0.27
MCTP1-201ENST00000312216 MIER1Q8N108 512 aa13.33□□□□□ -0.28
MCTP1-201ENST00000312216 ADCY10Q96PN6 1610 aa13.33□□□□□ -0.28
MCTP1-201ENST00000312216 ITSN2Q9NZM3 1697 aa13.32□□□□□ -0.28
MCTP1-201ENST00000312216 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
MCTP1-201ENST00000312216 CDK11AQ9UQ88 783 aaPredicted RBP13.32□□□□□ -0.28
MCTP1-201ENST00000312216 DNMT1P26358 1616 aaKnown RBP13.32□□□□□ -0.28
MCTP1-201ENST00000312216 TROQ12816 1431 aaPredicted RBP13.31□□□□□ -0.28
MCTP1-201ENST00000312216 ROCK1Q13464 1354 aa13.29□□□□□ -0.28
MCTP1-201ENST00000312216 DAPK1P53355 1430 aa13.28□□□□□ -0.28
MCTP1-201ENST00000312216 SIN3AQ96ST3 1273 aa13.28□□□□□ -0.28
MCTP1-201ENST00000312216 TONSLQ96HA7 1378 aa13.27□□□□□ -0.28
MCTP1-201ENST00000312216 ABCA8O94911 1581 aa13.27□□□□□ -0.29
MCTP1-201ENST00000312216 PLB1Q6P1J6 1458 aa13.26□□□□□ -0.29
MCTP1-201ENST00000312216 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
MCTP1-201ENST00000312216 FBLN2P98095 1184 aa13.23□□□□□ -0.29
MCTP1-201ENST00000312216 ADGBQ8N7X0 1667 aa13.23□□□□□ -0.29
MCTP1-201ENST00000312216 CAMSAP2Q08AD1 1489 aa13.23□□□□□ -0.29
MCTP1-201ENST00000312216 ABCC5O15440 1437 aa13.23□□□□□ -0.29
MCTP1-201ENST00000312216 ARID3CA6NKF2 412 aa13.23□□□□□ -0.29
MCTP1-201ENST00000312216 PPP1R15AO75807 674 aaPredicted RBP13.23□□□□□ -0.29
MCTP1-201ENST00000312216 KIF14Q15058 1648 aa13.23□□□□□ -0.29
MCTP1-201ENST00000312216 KDM6BO15054 1643 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms