RNA–Protein interactions for RNA: ENST00000311785.11

SEC31A-202, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC31A, Length 3,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-202ENST00000311785 SMARCA4P51532 1647 aa17.55■□□□□ 0.4
SEC31A-202ENST00000311785 NPM2Q86SE8 214 aaKnown RBP17.54■□□□□ 0.4
SEC31A-202ENST00000311785 ZNF326Q5BKZ1 582 aaKnown RBP17.54■□□□□ 0.4
SEC31A-202ENST00000311785 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
SEC31A-202ENST00000311785 MRS2Q9HD23 443 aa17.51■□□□□ 0.39
SEC31A-202ENST00000311785 SYNJ1O43426 1573 aa17.5■□□□□ 0.39
SEC31A-202ENST00000311785 RTL5Q5HYW3 569 aaPredicted RBP17.5■□□□□ 0.39
SEC31A-202ENST00000311785 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
SEC31A-202ENST00000311785 SALL2Q9Y467 1007 aaPredicted RBP17.49■□□□□ 0.39
SEC31A-202ENST00000311785 DEKP35659 375 aaKnown RBP17.48■□□□□ 0.39
SEC31A-202ENST00000311785 RRP7BPQ9NSQ0 103 aa17.48■□□□□ 0.39
SEC31A-202ENST00000311785 EIF4G1Q04637 1599 aaKnown RBP17.48■□□□□ 0.39
SEC31A-202ENST00000311785 SETD5Q9C0A6 1442 aa17.48■□□□□ 0.39
SEC31A-202ENST00000311785 CCER2I3L3R5 266 aa17.46■□□□□ 0.39
SEC31A-202ENST00000311785 RTN4Q9NQC3 1192 aaKnown RBP17.45■□□□□ 0.38
SEC31A-202ENST00000311785 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
SEC31A-202ENST00000311785 FOXD1Q16676 465 aa17.4■□□□□ 0.38
SEC31A-202ENST00000311785 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
SEC31A-202ENST00000311785 PPP4R2Q9NY27 417 aa17.39■□□□□ 0.37
SEC31A-202ENST00000311785 WDR97A6NE52 1622 aa17.39■□□□□ 0.37
SEC31A-202ENST00000311785 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
SEC31A-202ENST00000311785 CCDC184Q52MB2 194 aa17.37■□□□□ 0.37
SEC31A-202ENST00000311785 ANP32AP39687 249 aaKnown RBP17.37■□□□□ 0.37
SEC31A-202ENST00000311785 HSPA5P11021 654 aaKnown RBP17.36■□□□□ 0.37
SEC31A-202ENST00000311785 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.37
SEC31A-202ENST00000311785 PHLDB1Q86UU1 1377 aa17.33■□□□□ 0.37
SEC31A-202ENST00000311785 NOP58Q9Y2X3 529 aaKnown RBP17.33■□□□□ 0.36
SEC31A-202ENST00000311785 ZBTB47Q9UFB7 747 aaPredicted RBP17.32■□□□□ 0.36
SEC31A-202ENST00000311785 RRBP1Q9P2E9 1410 aaKnown RBP17.31■□□□□ 0.36
SEC31A-202ENST00000311785 LAS1LQ9Y4W2 734 aaKnown RBP17.29■□□□□ 0.36
SEC31A-202ENST00000311785 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
SEC31A-202ENST00000311785 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
SEC31A-202ENST00000311785 FANCIQ9NVI1 1328 aa17.27■□□□□ 0.35
SEC31A-202ENST00000311785 CUX2O14529 1486 aa17.24■□□□□ 0.35
SEC31A-202ENST00000311785 ARHGAP35Q9NRY4 1499 aa17.23■□□□□ 0.35
SEC31A-202ENST00000311785 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
SEC31A-202ENST00000311785 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
SEC31A-202ENST00000311785 TIMELESSQ9UNS1 1208 aa17.22■□□□□ 0.35
SEC31A-202ENST00000311785 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
SEC31A-202ENST00000311785 FHOD3Q2V2M9 1422 aa17.19■□□□□ 0.34
SEC31A-202ENST00000311785 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
SEC31A-202ENST00000311785 TMC1Q8TDI8 760 aa17.18■□□□□ 0.34
SEC31A-202ENST00000311785 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.17■□□□□ 0.34
SEC31A-202ENST00000311785 DAXXQ9UER7 740 aaPredicted RBP17.17■□□□□ 0.34
SEC31A-202ENST00000311785 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
SEC31A-202ENST00000311785 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
SEC31A-202ENST00000311785 EIF5BO60841 1220 aaKnown RBP17.16■□□□□ 0.34
SEC31A-202ENST00000311785 ANO8Q9HCE9 1232 aaPredicted RBP17.16■□□□□ 0.34
SEC31A-202ENST00000311785 PRKRIP1Q9H875 184 aaPredicted RBP17.15■□□□□ 0.34
SEC31A-202ENST00000311785 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
SEC31A-202ENST00000311785 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
SEC31A-202ENST00000311785 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
SEC31A-202ENST00000311785 C11orf95C9JLR9 678 aaPredicted RBP17.12■□□□□ 0.33
SEC31A-202ENST00000311785 NEFMP07197 916 aa17.11■□□□□ 0.33
SEC31A-202ENST00000311785 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
SEC31A-202ENST00000311785 IGF1RP08069 1367 aa17.1■□□□□ 0.33
SEC31A-202ENST00000311785 LRRC9Q6ZRR7 1453 aa17.09■□□□□ 0.33
SEC31A-202ENST00000311785 IL27Q8NEV9 243 aa17.07■□□□□ 0.32
SEC31A-202ENST00000311785 IPO9Q96P70 1041 aaKnown RBP17.06■□□□□ 0.32
SEC31A-202ENST00000311785 FHAD1B1AJZ9 1412 aa17.06■□□□□ 0.32
SEC31A-202ENST00000311785 MPHOSPH9Q99550 1183 aa17.05■□□□□ 0.32
SEC31A-202ENST00000311785 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
SEC31A-202ENST00000311785 CCDC18Q5T9S5 1454 aa17.04■□□□□ 0.32
SEC31A-202ENST00000311785 ARXQ96QS3 562 aa17.02■□□□□ 0.31
SEC31A-202ENST00000311785 TOP2BQ02880 1626 aa17.01■□□□□ 0.31
SEC31A-202ENST00000311785 ERICH3Q5RHP9 1530 aa17■□□□□ 0.31
SEC31A-202ENST00000311785 SLC4A3P48751 1232 aa17■□□□□ 0.31
SEC31A-202ENST00000311785 ZBED9Q6R2W3 1325 aa17■□□□□ 0.31
SEC31A-202ENST00000311785 ERICH6BQ5W0A0 696 aa17■□□□□ 0.31
SEC31A-202ENST00000311785 SKAP1Q86WV1 359 aa16.99■□□□□ 0.31
SEC31A-202ENST00000311785 CUX1P39880 1505 aa16.98■□□□□ 0.31
SEC31A-202ENST00000311785 NUDCQ9Y266 331 aa16.98■□□□□ 0.31
SEC31A-202ENST00000311785 PRKCSHP14314 528 aaPredicted RBP16.97■□□□□ 0.31
SEC31A-202ENST00000311785 EXOC6Q8TAG9 804 aa16.97■□□□□ 0.31
SEC31A-202ENST00000311785 NBPF8Q3BBV2 869 aa16.96■□□□□ 0.31
SEC31A-202ENST00000311785 PLIN1O60240 522 aa16.96■□□□□ 0.31
SEC31A-202ENST00000311785 TIAM1Q13009 1591 aa16.96■□□□□ 0.3
SEC31A-202ENST00000311785 KIF7Q2M1P5 1343 aa16.95■□□□□ 0.3
SEC31A-202ENST00000311785 FGD6Q6ZV73 1430 aa16.92■□□□□ 0.3
SEC31A-202ENST00000311785 CCDC7Q96M83 1385 aa16.92■□□□□ 0.3
SEC31A-202ENST00000311785 FMN1Q68DA7 1419 aa16.92■□□□□ 0.3
SEC31A-202ENST00000311785 UACAQ9BZF9 1416 aa16.9■□□□□ 0.3
SEC31A-202ENST00000311785 CARD11Q9BXL7 1154 aa16.9■□□□□ 0.3
SEC31A-202ENST00000311785 RGL3Q3MIN7 710 aa16.89■□□□□ 0.29
SEC31A-202ENST00000311785 CNTLNQ9NXG0 1405 aa16.88■□□□□ 0.29
SEC31A-202ENST00000311785 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
SEC31A-202ENST00000311785 PTPRKQ15262 1439 aa16.88■□□□□ 0.29
SEC31A-202ENST00000311785 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
SEC31A-202ENST00000311785 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.297e-7■■■■□ 21.1
SEC31A-202ENST00000311785 PDE4AP27815 886 aa16.88■□□□□ 0.29
SEC31A-202ENST00000311785 RGS3P49796 1198 aa16.88■□□□□ 0.29
SEC31A-202ENST00000311785 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
SEC31A-202ENST00000311785 RCAN3Q9UKA8 241 aa16.86■□□□□ 0.29
SEC31A-202ENST00000311785 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
SEC31A-202ENST00000311785 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
SEC31A-202ENST00000311785 FBLN2P98095 1184 aa16.84■□□□□ 0.29
SEC31A-202ENST00000311785 RAD54L2Q9Y4B4 1467 aa16.84■□□□□ 0.29
SEC31A-202ENST00000311785 BRPF3Q9ULD4 1205 aa16.82■□□□□ 0.28
SEC31A-202ENST00000311785 FGD5Q6ZNL6 1462 aa16.82■□□□□ 0.28
SEC31A-202ENST00000311785 CDCA7LQ96GN5 454 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms