RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 CTTNBP2Q8WZ74 1663 aa14.24□□□□□ -0.13
RBFOX1-201ENST00000311745 CUL7Q14999 1698 aa14.23□□□□□ -0.13
RBFOX1-201ENST00000311745 TARBP1Q13395 1621 aaKnown RBP14.23□□□□□ -0.13
RBFOX1-201ENST00000311745 EIF5BO60841 1220 aaKnown RBP14.22□□□□□ -0.13
RBFOX1-201ENST00000311745 CARMIL1Q5VZK9 1371 aa14.2□□□□□ -0.14
RBFOX1-201ENST00000311745 CFAP43Q8NDM7 1665 aa14.19□□□□□ -0.14
RBFOX1-201ENST00000311745 LRRIQ1Q96JM4 1722 aa14.18□□□□□ -0.14
RBFOX1-201ENST00000311745 KANK4Q5T7N3 995 aaPredicted RBP14.17□□□□□ -0.14
RBFOX1-201ENST00000311745 TIAM1Q13009 1591 aa14.16□□□□□ -0.14
RBFOX1-201ENST00000311745 YTHDC1Q96MU7 727 aaKnown RBP14.16□□□□□ -0.14
RBFOX1-201ENST00000311745 MAP3K1Q13233 1512 aa14.15□□□□□ -0.14
RBFOX1-201ENST00000311745 PCF11O94913 1555 aaKnown RBP14.15□□□□□ -0.14
RBFOX1-201ENST00000311745 RRBP1Q9P2E9 1410 aaKnown RBP14.14□□□□□ -0.15
RBFOX1-201ENST00000311745 RANGAP1P46060 587 aaPredicted RBP14.14□□□□□ -0.15
RBFOX1-201ENST00000311745 PBRM1Q86U86 1689 aa14.13□□□□□ -0.15
RBFOX1-201ENST00000311745 SAMD9Q5K651 1589 aa14.12□□□□□ -0.15
RBFOX1-201ENST00000311745 PLEKHG5O94827 1062 aa14.1□□□□□ -0.15
RBFOX1-201ENST00000311745 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.16
RBFOX1-201ENST00000311745 EFCAB5A4FU69 1503 aa14.07□□□□□ -0.16
RBFOX1-201ENST00000311745 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
RBFOX1-201ENST00000311745 CCDC136Q96JN2 1154 aa14.06□□□□□ -0.16
RBFOX1-201ENST00000311745 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
RBFOX1-201ENST00000311745 GAPVD1Q14C86 1478 aa14.04□□□□□ -0.16
RBFOX1-201ENST00000311745 LRRC9Q6ZRR7 1453 aa14.04□□□□□ -0.16
RBFOX1-201ENST00000311745 AQRO60306 1485 aaKnown RBP eCLIP14.02□□□□□ -0.17
RBFOX1-201ENST00000311745 TDRD9Q8NDG6 1382 aaKnown RBP14.02□□□□□ -0.17
RBFOX1-201ENST00000311745 ADAMTS12P58397 1594 aa14.02□□□□□ -0.17
RBFOX1-201ENST00000311745 WDR62O43379 1518 aa14.01□□□□□ -0.17
RBFOX1-201ENST00000311745 FHOD3Q2V2M9 1422 aa14.01□□□□□ -0.17
RBFOX1-201ENST00000311745 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
RBFOX1-201ENST00000311745 FYCO1Q9BQS8 1478 aa14□□□□□ -0.17
RBFOX1-201ENST00000311745 MRC2Q9UBG0 1479 aa13.99□□□□□ -0.17
RBFOX1-201ENST00000311745 CASKIN1Q8WXD9 1431 aa13.98□□□□□ -0.17
RBFOX1-201ENST00000311745 DAXXQ9UER7 740 aaPredicted RBP13.97□□□□□ -0.17
RBFOX1-201ENST00000311745 THOC2Q8NI27 1593 aaKnown RBP13.97□□□□□ -0.17
RBFOX1-201ENST00000311745 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
RBFOX1-201ENST00000311745 DHX57Q6P158 1386 aaKnown RBP13.96□□□□□ -0.17
RBFOX1-201ENST00000311745 GRIN2BQ13224 1484 aa13.95□□□□□ -0.18
RBFOX1-201ENST00000311745 DIEXFQ68CQ4 756 aaKnown RBP13.95□□□□□ -0.18
RBFOX1-201ENST00000311745 FHAD1B1AJZ9 1412 aa13.94□□□□□ -0.18
RBFOX1-201ENST00000311745 CCNB3Q8WWL7 1395 aa13.94□□□□□ -0.18
RBFOX1-201ENST00000311745 SALL2Q9Y467 1007 aaPredicted RBP13.93□□□□□ -0.18
RBFOX1-201ENST00000311745 ZNF608Q9ULD9 1512 aaPredicted RBP13.93□□□□□ -0.18
RBFOX1-201ENST00000311745 MAGI3Q5TCQ9 1506 aa13.92□□□□□ -0.18
RBFOX1-201ENST00000311745 MAPKBP1O60336 1514 aa13.91□□□□□ -0.18
RBFOX1-201ENST00000311745 EIF4G3O43432 1585 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-201ENST00000311745 UBE2Q2Q8WVN8 375 aa13.89□□□□□ -0.19
RBFOX1-201ENST00000311745 ARHGEF11O15085 1522 aa13.89□□□□□ -0.19
RBFOX1-201ENST00000311745 TSHZ2Q9NRE2 1034 aa13.88□□□□□ -0.19
RBFOX1-201ENST00000311745 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
RBFOX1-201ENST00000311745 IQGAP2Q13576 1575 aa13.87□□□□□ -0.19
RBFOX1-201ENST00000311745 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
RBFOX1-201ENST00000311745 FMN1Q68DA7 1419 aa13.84□□□□□ -0.19
RBFOX1-201ENST00000311745 UGGT2Q9NYU1 1516 aa13.84□□□□□ -0.19
RBFOX1-201ENST00000311745 PODXL2Q9NZ53 605 aa13.82□□□□□ -0.2
RBFOX1-201ENST00000311745 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.82□□□□□ -0.2
RBFOX1-201ENST00000311745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.81□□□□□ -0.2
RBFOX1-201ENST00000311745 DISP1Q96F81 1524 aa13.8□□□□□ -0.2
RBFOX1-201ENST00000311745 RAB3GAP2Q9H2M9 1393 aa13.8□□□□□ -0.2
RBFOX1-201ENST00000311745 CLSPNQ9HAW4 1339 aa13.8□□□□□ -0.2
RBFOX1-201ENST00000311745 PTPRKQ15262 1439 aa13.79□□□□□ -0.2
RBFOX1-201ENST00000311745 SUPT6HQ7KZ85 1726 aaKnown RBP13.79□□□□□ -0.2
RBFOX1-201ENST00000311745 KIAA0556O60303 1618 aa13.79□□□□□ -0.2
RBFOX1-201ENST00000311745 CEP170Q5SW79 1584 aa13.78□□□□□ -0.2
RBFOX1-201ENST00000311745 EHBP1L1Q8N3D4 1523 aa13.77□□□□□ -0.2
RBFOX1-201ENST00000311745 PKNOX2Q96KN3 472 aa13.77□□□□□ -0.2
RBFOX1-201ENST00000311745 HECW1Q76N89 1606 aa13.77□□□□□ -0.21
RBFOX1-201ENST00000311745 FGD6Q6ZV73 1430 aa13.77□□□□□ -0.21
RBFOX1-201ENST00000311745 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
RBFOX1-201ENST00000311745 GRIN2AQ12879 1464 aa13.75□□□□□ -0.21
RBFOX1-201ENST00000311745 ZNF316A6NFI3 1004 aaPredicted RBP13.75□□□□□ -0.21
RBFOX1-201ENST00000311745 SETD5Q9C0A6 1442 aa13.74□□□□□ -0.21
RBFOX1-201ENST00000311745 PTPN23Q9H3S7 1636 aa13.74□□□□□ -0.21
RBFOX1-201ENST00000311745 EPRSP07814 1512 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-201ENST00000311745 CDK13Q14004 1512 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-201ENST00000311745 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
RBFOX1-201ENST00000311745 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
RBFOX1-201ENST00000311745 KIAA0586Q9BVV6 1533 aa13.72□□□□□ -0.21
RBFOX1-201ENST00000311745 GCC2Q8IWJ2 1684 aa13.7□□□□□ -0.22
RBFOX1-201ENST00000311745 MYOM3Q5VTT5 1437 aa13.7□□□□□ -0.22
RBFOX1-201ENST00000311745 MAGI1Q96QZ7 1491 aaPredicted RBP13.69□□□□□ -0.22
RBFOX1-201ENST00000311745 KDM6BO15054 1643 aa13.69□□□□□ -0.22
RBFOX1-201ENST00000311745 RAPGEF6Q8TEU7 1601 aa13.68□□□□□ -0.22
RBFOX1-201ENST00000311745 DENND4BO75064 1496 aaPredicted RBP13.68□□□□□ -0.22
RBFOX1-201ENST00000311745 NUP153P49790 1475 aaKnown RBP13.68□□□□□ -0.22
RBFOX1-201ENST00000311745 SYNJ2O15056 1496 aa13.66□□□□□ -0.22
RBFOX1-201ENST00000311745 KDM5BQ9UGL1 1544 aa13.65□□□□□ -0.22
RBFOX1-201ENST00000311745 ITGAEP38570 1179 aa13.65□□□□□ -0.22
RBFOX1-201ENST00000311745 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
RBFOX1-201ENST00000311745 HFM1A2PYH4 1435 aa13.65□□□□□ -0.22
RBFOX1-201ENST00000311745 NUP160Q12769 1436 aa13.65□□□□□ -0.22
RBFOX1-201ENST00000311745 RTN4Q9NQC3 1192 aaKnown RBP13.65□□□□□ -0.23
RBFOX1-201ENST00000311745 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
RBFOX1-201ENST00000311745 NAIPQ13075 1403 aa13.64□□□□□ -0.23
RBFOX1-201ENST00000311745 ADCY10Q96PN6 1610 aa13.63□□□□□ -0.23
RBFOX1-201ENST00000311745 DEKP35659 375 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-201ENST00000311745 MTUS2Q5JR59 1369 aa13.63□□□□□ -0.23
RBFOX1-201ENST00000311745 FAM50AQ14320 339 aaKnown RBP13.6□□□□□ -0.23
RBFOX1-201ENST00000311745 ATP1B4Q9UN42 357 aaPredicted RBP13.6□□□□□ -0.23
RBFOX1-201ENST00000311745 KIF14Q15058 1648 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms