RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ERICH6Q7L0X2 663 aa20.63■□□□□ 0.89
COL6A2-202ENST00000310645 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
COL6A2-202ENST00000310645 SETD5Q9C0A6 1442 aa20.62■□□□□ 0.89
COL6A2-202ENST00000310645 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
COL6A2-202ENST00000310645 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
COL6A2-202ENST00000310645 CCER2I3L3R5 266 aa20.58■□□□□ 0.89
COL6A2-202ENST00000310645 ARHGAP35Q9NRY4 1499 aa20.58■□□□□ 0.89
COL6A2-202ENST00000310645 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
COL6A2-202ENST00000310645 HNRNPUQ00839 825 aaKnown RBP eCLIP20.56■□□□□ 0.88
COL6A2-202ENST00000310645 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
COL6A2-202ENST00000310645 KIF27Q86VH2 1401 aa20.55■□□□□ 0.88
COL6A2-202ENST00000310645 CDK11AQ9UQ88 783 aaPredicted RBP20.54■□□□□ 0.88
COL6A2-202ENST00000310645 PHLDB1Q86UU1 1377 aa20.5■□□□□ 0.87
COL6A2-202ENST00000310645 TONSLQ96HA7 1378 aa20.44■□□□□ 0.86
COL6A2-202ENST00000310645 BIVM-ERCC5R4GMW8 1640 aa20.44■□□□□ 0.86
COL6A2-202ENST00000310645 TIMELESSQ9UNS1 1208 aa20.42■□□□□ 0.86
COL6A2-202ENST00000310645 CUX1P39880 1505 aa20.42■□□□□ 0.86
COL6A2-202ENST00000310645 FANCIQ9NVI1 1328 aa20.4■□□□□ 0.86
COL6A2-202ENST00000310645 TIAM1Q13009 1591 aa20.38■□□□□ 0.85
COL6A2-202ENST00000310645 LRRC9Q6ZRR7 1453 aa20.38■□□□□ 0.85
COL6A2-202ENST00000310645 B4GALNT3Q6L9W6 998 aa20.31■□□□□ 0.84
COL6A2-202ENST00000310645 IGF1RP08069 1367 aa20.31■□□□□ 0.84
COL6A2-202ENST00000310645 FAM9BQ8IZU0 186 aa20.29■□□□□ 0.84
COL6A2-202ENST00000310645 CARMIL1Q5VZK9 1371 aa20.28■□□□□ 0.84
COL6A2-202ENST00000310645 PPP4R2Q9NY27 417 aa20.28■□□□□ 0.84
COL6A2-202ENST00000310645 CCDC184Q52MB2 194 aa20.26■□□□□ 0.83
COL6A2-202ENST00000310645 DEKP35659 375 aaKnown RBP20.25■□□□□ 0.83
COL6A2-202ENST00000310645 NBR1Q14596 966 aa20.25■□□□□ 0.83
COL6A2-202ENST00000310645 CNGB1Q14028 1251 aaPredicted RBP20.23■□□□□ 0.83
COL6A2-202ENST00000310645 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
COL6A2-202ENST00000310645 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
COL6A2-202ENST00000310645 MAP3K1Q13233 1512 aa20.21■□□□□ 0.83
COL6A2-202ENST00000310645 FHOD3Q2V2M9 1422 aa20.2■□□□□ 0.82
COL6A2-202ENST00000310645 WASHC2AQ641Q2 1341 aa20.2■□□□□ 0.82
COL6A2-202ENST00000310645 MRS2Q9HD23 443 aa20.17■□□□□ 0.82
COL6A2-202ENST00000310645 CCDC18Q5T9S5 1454 aa20.16■□□□□ 0.82
COL6A2-202ENST00000310645 PCF11O94913 1555 aaKnown RBP20.15■□□□□ 0.82
COL6A2-202ENST00000310645 CHIC2Q9UKJ5 165 aa20.14■□□□□ 0.81
COL6A2-202ENST00000310645 SENP3-EIF4A1A0A087X0R7 540 aa20.13■□□□□ 0.81
COL6A2-202ENST00000310645 RRP7BPQ9NSQ0 103 aa20.13■□□□□ 0.81
COL6A2-202ENST00000310645 ERICH6BQ5W0A0 696 aa20.12■□□□□ 0.81
COL6A2-202ENST00000310645 EIF4G2P78344 907 aaKnown RBP eCLIP20.12■□□□□ 0.81
COL6A2-202ENST00000310645 PAK3O75914 559 aaPredicted RBP20.11■□□□□ 0.81
COL6A2-202ENST00000310645 NOP58Q9Y2X3 529 aaKnown RBP20.11■□□□□ 0.81
COL6A2-202ENST00000310645 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
COL6A2-202ENST00000310645 MYT1LQ9UL68 1186 aa20.09■□□□□ 0.81
COL6A2-202ENST00000310645 CFTRP13569 1480 aa20.09■□□□□ 0.81
COL6A2-202ENST00000310645 PTPRKQ15262 1439 aa20.09■□□□□ 0.81
COL6A2-202ENST00000310645 UACAQ9BZF9 1416 aa20.09■□□□□ 0.81
COL6A2-202ENST00000310645 FGD6Q6ZV73 1430 aa20.09■□□□□ 0.81
COL6A2-202ENST00000310645 C11orf95C9JLR9 678 aaPredicted RBP20.06■□□□□ 0.8
COL6A2-202ENST00000310645 PRKRIP1Q9H875 184 aaPredicted RBP20.06■□□□□ 0.8
COL6A2-202ENST00000310645 AQRO60306 1485 aaKnown RBP eCLIP20.06■□□□□ 0.8
COL6A2-202ENST00000310645 FOXD1Q16676 465 aa20.04■□□□□ 0.8
COL6A2-202ENST00000310645 CFAP43Q8NDM7 1665 aa20.03■□□□□ 0.8
COL6A2-202ENST00000310645 POLR3GLQ9BT43 218 aa20.03■□□□□ 0.8
COL6A2-202ENST00000310645 NCAPD3P42695 1498 aa20.03■□□□□ 0.8
COL6A2-202ENST00000310645 FGD5Q6ZNL6 1462 aa20.02■□□□□ 0.8
COL6A2-202ENST00000310645 HFM1A2PYH4 1435 aa20.02■□□□□ 0.8
COL6A2-202ENST00000310645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.01■□□□□ 0.79
COL6A2-202ENST00000310645 NAIPQ13075 1403 aa20■□□□□ 0.79
COL6A2-202ENST00000310645 ZBED9Q6R2W3 1325 aa20■□□□□ 0.79
COL6A2-202ENST00000310645 L3MBTL2Q969R5 705 aa19.99■□□□□ 0.79
COL6A2-202ENST00000310645 CCDC136Q96JN2 1154 aa19.99■□□□□ 0.79
COL6A2-202ENST00000310645 CASKIN1Q8WXD9 1431 aa19.98■□□□□ 0.79
COL6A2-202ENST00000310645 CNTLNQ9NXG0 1405 aa19.98■□□□□ 0.79
COL6A2-202ENST00000310645 FYCO1Q9BQS8 1478 aa19.98■□□□□ 0.79
COL6A2-202ENST00000310645 ANP32AP39687 249 aaKnown RBP19.97■□□□□ 0.79
COL6A2-202ENST00000310645 RTL5Q5HYW3 569 aaPredicted RBP19.96■□□□□ 0.79
COL6A2-202ENST00000310645 PTPN23Q9H3S7 1636 aa19.96■□□□□ 0.79
COL6A2-202ENST00000310645 FMN1Q68DA7 1419 aa19.96■□□□□ 0.79
COL6A2-202ENST00000310645 HMGXB3Q12766 1538 aa19.95■□□□□ 0.78
COL6A2-202ENST00000310645 AKNAQ7Z591 1439 aa19.93■□□□□ 0.78
COL6A2-202ENST00000310645 CCDC7Q96M83 1385 aa19.93■□□□□ 0.78
COL6A2-202ENST00000310645 ZBTB47Q9UFB7 747 aaPredicted RBP19.93■□□□□ 0.78
COL6A2-202ENST00000310645 KDM5BQ9UGL1 1544 aa19.93■□□□□ 0.78
COL6A2-202ENST00000310645 NPM2Q86SE8 214 aaKnown RBP19.91■□□□□ 0.78
COL6A2-202ENST00000310645 ARID3CA6NKF2 412 aa19.9■□□□□ 0.78
COL6A2-202ENST00000310645 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
COL6A2-202ENST00000310645 IPO9Q96P70 1041 aaKnown RBP19.89■□□□□ 0.78
COL6A2-202ENST00000310645 NBPF8Q3BBV2 869 aa19.88■□□□□ 0.77
COL6A2-202ENST00000310645 NCOA2Q15596 1464 aa19.88■□□□□ 0.77
COL6A2-202ENST00000310645 RAD54L2Q9Y4B4 1467 aa19.88■□□□□ 0.77
COL6A2-202ENST00000310645 MYOM3Q5VTT5 1437 aa19.87■□□□□ 0.77
COL6A2-202ENST00000310645 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
COL6A2-202ENST00000310645 KIF7Q2M1P5 1343 aa19.86■□□□□ 0.77
COL6A2-202ENST00000310645 ANO8Q9HCE9 1232 aaPredicted RBP19.85■□□□□ 0.77
COL6A2-202ENST00000310645 ZNF326Q5BKZ1 582 aaKnown RBP19.85■□□□□ 0.77
COL6A2-202ENST00000310645 RTN4Q9NQC3 1192 aaKnown RBP19.84■□□□□ 0.77
COL6A2-202ENST00000310645 PRKCSHP14314 528 aaPredicted RBP19.83■□□□□ 0.77
COL6A2-202ENST00000310645 NUDCQ9Y266 331 aa19.83■□□□□ 0.77
COL6A2-202ENST00000310645 NCOA1Q15788 1441 aa19.83■□□□□ 0.76
COL6A2-202ENST00000310645 EFCAB5A4FU69 1503 aa19.8■□□□□ 0.76
COL6A2-202ENST00000310645 LAS1LQ9Y4W2 734 aaKnown RBP19.79■□□□□ 0.76
COL6A2-202ENST00000310645 IL27Q8NEV9 243 aa19.78■□□□□ 0.76
COL6A2-202ENST00000310645 SALL2Q9Y467 1007 aaPredicted RBP19.77■□□□□ 0.76
COL6A2-202ENST00000310645 SNAPC4Q5SXM2 1469 aa19.77■□□□□ 0.76
COL6A2-202ENST00000310645 DENND4BO75064 1496 aaPredicted RBP19.77■□□□□ 0.75
COL6A2-202ENST00000310645 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
COL6A2-202ENST00000310645 SLC4A1APQ9BWU0 796 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms