RNA–Protein interactions for RNA: ENST00000310513.10

CELF1-201, Transcript of CUGBP Elav-like family member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF1, Length 4,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-201ENST00000310513 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
CELF1-201ENST00000310513 STAG3Q9UJ98 1225 aa19.23■□□□□ 0.67
CELF1-201ENST00000310513 FAM9BQ8IZU0 186 aa19.22■□□□□ 0.67
CELF1-201ENST00000310513 FKBP8Q14318 412 aa19.21■□□□□ 0.67
CELF1-201ENST00000310513 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
CELF1-201ENST00000310513 MIER1Q8N108 512 aa19.2■□□□□ 0.66
CELF1-201ENST00000310513 CFDP1Q9UEE9 299 aaPredicted RBP19.2■□□□□ 0.66
CELF1-201ENST00000310513 VPS8Q8N3P4 1428 aa19.2■□□□□ 0.66
CELF1-201ENST00000310513 ABCC8Q09428 1581 aa19.19■□□□□ 0.66
CELF1-201ENST00000310513 CCNB3Q8WWL7 1395 aa19.18■□□□□ 0.66
CELF1-201ENST00000310513 KDM2AQ9Y2K7 1162 aa19.18■□□□□ 0.66
CELF1-201ENST00000310513 MRS2Q9HD23 443 aa19.17■□□□□ 0.66
CELF1-201ENST00000310513 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
CELF1-201ENST00000310513 ERCC6Q03468 1493 aa19.15■□□□□ 0.66
CELF1-201ENST00000310513 ANP32AP39687 249 aaKnown RBP19.13■□□□□ 0.65
CELF1-201ENST00000310513 KCNH8Q96L42 1107 aa19.11■□□□□ 0.65
CELF1-201ENST00000310513 HIRIP3Q9BW71 556 aaPredicted RBP19.09■□□□□ 0.65
CELF1-201ENST00000310513 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.64
CELF1-201ENST00000310513 SMARCA4P51532 1647 aa19.06■□□□□ 0.64
CELF1-201ENST00000310513 SLC24A1O60721 1099 aa19.06■□□□□ 0.64
CELF1-201ENST00000310513 WDR43Q15061 677 aaKnown RBP eCLIP19.05■□□□□ 0.64
CELF1-201ENST00000310513 TIMELESSQ9UNS1 1208 aa19.04■□□□□ 0.64
CELF1-201ENST00000310513 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
CELF1-201ENST00000310513 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.02■□□□□ 0.63
CELF1-201ENST00000310513 CADPSQ9ULU8 1353 aa19■□□□□ 0.63
CELF1-201ENST00000310513 SALL2Q9Y467 1007 aaPredicted RBP19■□□□□ 0.63
CELF1-201ENST00000310513 EIF4G1Q04637 1599 aaKnown RBP18.99■□□□□ 0.63
CELF1-201ENST00000310513 CCDC136Q96JN2 1154 aa18.98■□□□□ 0.63
CELF1-201ENST00000310513 FMN1Q68DA7 1419 aa18.96■□□□□ 0.63
CELF1-201ENST00000310513 SIN3AQ96ST3 1273 aa18.96■□□□□ 0.63
CELF1-201ENST00000310513 RGL3Q3MIN7 710 aa18.96■□□□□ 0.63
CELF1-201ENST00000310513 ARHGAP35Q9NRY4 1499 aa18.96■□□□□ 0.63
CELF1-201ENST00000310513 CDCA8Q53HL2 280 aa18.95■□□□□ 0.62
CELF1-201ENST00000310513 SETD5Q9C0A6 1442 aa18.93■□□□□ 0.62
CELF1-201ENST00000310513 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
CELF1-201ENST00000310513 CARD11Q9BXL7 1154 aa18.92■□□□□ 0.62
CELF1-201ENST00000310513 BCL11AQ9H165 835 aa18.91■□□□□ 0.62
CELF1-201ENST00000310513 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
CELF1-201ENST00000310513 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
CELF1-201ENST00000310513 NPM2Q86SE8 214 aaKnown RBP18.9■□□□□ 0.62
CELF1-201ENST00000310513 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
CELF1-201ENST00000310513 UPF2Q9HAU5 1272 aaKnown RBP18.89■□□□□ 0.61
CELF1-201ENST00000310513 RAPGEF2Q9Y4G8 1499 aa18.88■□□□□ 0.61
CELF1-201ENST00000310513 PLPPR3Q6T4P5 718 aa18.83■□□□□ 0.61
CELF1-201ENST00000310513 PPP1R15AO75807 674 aaPredicted RBP18.82■□□□□ 0.6
CELF1-201ENST00000310513 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
CELF1-201ENST00000310513 RAB3GAP2Q9H2M9 1393 aa18.78■□□□□ 0.6
CELF1-201ENST00000310513 CFAP53Q96M91 514 aa18.77■□□□□ 0.6
CELF1-201ENST00000310513 IRX6P78412 446 aaPredicted RBP18.76■□□□□ 0.59
CELF1-201ENST00000310513 RUSC2Q8N2Y8 1516 aa18.73■□□□□ 0.59
CELF1-201ENST00000310513 KANK1Q14678 1352 aa18.73■□□□□ 0.59
CELF1-201ENST00000310513 FHOD3Q2V2M9 1422 aa18.73■□□□□ 0.59
CELF1-201ENST00000310513 HSP90AA1P07900 732 aaKnown RBP18.73■□□□□ 0.59
CELF1-201ENST00000310513 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
CELF1-201ENST00000310513 DCAF11Q8TEB1 546 aa18.7■□□□□ 0.58
CELF1-201ENST00000310513 CCER2I3L3R5 266 aa18.69■□□□□ 0.58
CELF1-201ENST00000310513 PKD2Q13563 968 aa18.67■□□□□ 0.58
CELF1-201ENST00000310513 ANKRD30AQ9BXX3 1397 aa18.67■□□□□ 0.58
CELF1-201ENST00000310513 TMF1P82094 1093 aa18.67■□□□□ 0.58
CELF1-201ENST00000310513 SUPT16HQ9Y5B9 1047 aaKnown RBP18.66■□□□□ 0.58
CELF1-201ENST00000310513 CCDC18Q5T9S5 1454 aa18.65■□□□□ 0.58
CELF1-201ENST00000310513 EFCAB2Q5VUJ9 269 aa18.64■□□□□ 0.58
CELF1-201ENST00000310513 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.58
CELF1-201ENST00000310513 MYH16Q9H6N6 1097 aa18.64■□□□□ 0.57
CELF1-201ENST00000310513 NCAPD3P42695 1498 aa18.63■□□□□ 0.57
CELF1-201ENST00000310513 HSPA5P11021 654 aaKnown RBP18.62■□□□□ 0.57
CELF1-201ENST00000310513 ARID4BQ4LE39 1312 aaPredicted RBP18.62■□□□□ 0.57
CELF1-201ENST00000310513 RSPH4AQ5TD94 716 aa18.6■□□□□ 0.57
CELF1-201ENST00000310513 POGKQ9P215 609 aa18.6■□□□□ 0.57
CELF1-201ENST00000310513 NUDCQ9Y266 331 aa18.6■□□□□ 0.57
CELF1-201ENST00000310513 NUP155O75694 1391 aa18.6■□□□□ 0.57
CELF1-201ENST00000310513 SENP3Q9H4L4 574 aaPredicted RBP18.59■□□□□ 0.57
CELF1-201ENST00000310513 PEG3Q9GZU2 1588 aa18.58■□□□□ 0.56
CELF1-201ENST00000310513 JPH4Q96JJ6 628 aa18.57■□□□□ 0.56
CELF1-201ENST00000310513 PPP4R2Q9NY27 417 aa18.57■□□□□ 0.56
CELF1-201ENST00000310513 ANP32BQ92688 251 aaKnown RBP18.57■□□□□ 0.56
CELF1-201ENST00000310513 IGF1RP08069 1367 aa18.55■□□□□ 0.56
CELF1-201ENST00000310513 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
CELF1-201ENST00000310513 MAPK8IP3Q9UPT6 1336 aa18.55■□□□□ 0.56
CELF1-201ENST00000310513 FOXD1Q16676 465 aa18.54■□□□□ 0.56
CELF1-201ENST00000310513 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
CELF1-201ENST00000310513 C14orf37Q86TY3 774 aa18.52■□□□□ 0.56
CELF1-201ENST00000310513 DDRGK1Q96HY6 314 aa18.51■□□□□ 0.55
CELF1-201ENST00000310513 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
CELF1-201ENST00000310513 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
CELF1-201ENST00000310513 PPM1GO15355 546 aaPredicted RBP18.5■□□□□ 0.55
CELF1-201ENST00000310513 SENP3-EIF4A1A0A087X0R7 540 aa18.49■□□□□ 0.55
CELF1-201ENST00000310513 HDGFP51858 240 aaKnown RBP18.49■□□□□ 0.55
CELF1-201ENST00000310513 GAPVD1Q14C86 1478 aa18.48■□□□□ 0.55
CELF1-201ENST00000310513 L3MBTL2Q969R5 705 aa18.48■□□□□ 0.55
CELF1-201ENST00000310513 NEUROD2Q15784 382 aa18.47■□□□□ 0.55
CELF1-201ENST00000310513 GGT6Q6P531 493 aa18.47■□□□□ 0.55
CELF1-201ENST00000310513 FTSJ3Q8IY81 847 aaKnown RBP18.47■□□□□ 0.55
CELF1-201ENST00000310513 KTN1Q86UP2 1357 aaKnown RBP18.46■□□□□ 0.55
CELF1-201ENST00000310513 BECN1Q14457 450 aa18.46■□□□□ 0.55
CELF1-201ENST00000310513 ROCK2O75116 1388 aaKnown RBP18.46■□□□□ 0.55
CELF1-201ENST00000310513 PNNQ9H307 717 aaKnown RBP18.46■□□□□ 0.55
CELF1-201ENST00000310513 NBR1Q14596 966 aa18.44■□□□□ 0.54
CELF1-201ENST00000310513 MS4A1P11836 297 aa18.44■□□□□ 0.54
CELF1-201ENST00000310513 HNRNPMP52272 730 aaKnown RBP eCLIP18.43■□□□□ 0.542e-8■■■■□ 24.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms