RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 TTLL5Q6EMB2 1281 aa2.14□□□□□ -2.07
CEP290-201ENST00000309041 GPR37L1O60883 481 aa2.14□□□□□ -2.07
CEP290-201ENST00000309041 BCANQ96GW7 911 aa2.14□□□□□ -2.07
CEP290-201ENST00000309041 CNKSR2Q8WXI2 1034 aa2.14□□□□□ -2.07
CEP290-201ENST00000309041 KDM4FA0A1W2PPD8 638 aa2.14□□□□□ -2.07
CEP290-201ENST00000309041 KRTAP17-1Q9BYP8 105 aa2.14□□□□□ -2.07
CEP290-201ENST00000309041 BICRAQ9NZM4 1560 aa2.14□□□□□ -2.07
CEP290-201ENST00000309041 ZBTB7CA1YPR0 619 aa2.14□□□□□ -2.07
CEP290-201ENST00000309041 GPR37O15354 613 aa2.14□□□□□ -2.07
CEP290-201ENST00000309041 VSIG10Q8N0Z9 540 aa2.13□□□□□ -2.07
CEP290-201ENST00000309041 PIAS4Q8N2W9 510 aaPredicted RBP2.13□□□□□ -2.07
CEP290-201ENST00000309041 SPRYD3Q8NCJ5 442 aa2.13□□□□□ -2.07
CEP290-201ENST00000309041 ERCC3P19447 782 aa2.12□□□□□ -2.07
CEP290-201ENST00000309041 FOXD4L5Q5VV16 416 aaPredicted RBP2.12□□□□□ -2.07
CEP290-201ENST00000309041 FOXD4L4Q8WXT5 416 aaPredicted RBP2.12□□□□□ -2.07
CEP290-201ENST00000309041 CCDC9Q9Y3X0 531 aaKnown RBP2.12□□□□□ -2.07
CEP290-201ENST00000309041 HRCP23327 699 aa2.12□□□□□ -2.07
CEP290-201ENST00000309041 NECTIN2Q92692 538 aa2.12□□□□□ -2.07
CEP290-201ENST00000309041 TMUB1Q9BVT8 246 aa2.12□□□□□ -2.07
CEP290-201ENST00000309041 TULP1O00294 542 aaPredicted RBP2.11□□□□□ -2.07
CEP290-201ENST00000309041 CNGB1Q14028 1251 aaPredicted RBP2.11□□□□□ -2.07
CEP290-201ENST00000309041 TPRNQ4KMQ1 711 aa2.11□□□□□ -2.07
CEP290-201ENST00000309041 SALL2Q9Y467 1007 aaPredicted RBP2.11□□□□□ -2.07
CEP290-201ENST00000309041 SERPINA10Q9UK55 444 aa2.1□□□□□ -2.07
CEP290-201ENST00000309041 GTF3C3Q9Y5Q9 886 aa2.1□□□□□ -2.07
CEP290-201ENST00000309041 NPM1P06748 294 aaKnown RBP eCLIP2.1□□□□□ -2.07
CEP290-201ENST00000309041 PSDA5PKW4 1024 aaPredicted RBP2.1□□□□□ -2.07
CEP290-201ENST00000309041 PLEKHG5O94827 1062 aa2.1□□□□□ -2.07
CEP290-201ENST00000309041 IBSPP21815 317 aaPredicted RBP2.1□□□□□ -2.07
CEP290-201ENST00000309041 SLC39A13Q96H72 371 aa2.1□□□□□ -2.07
CEP290-201ENST00000309041 APBB1O00213 710 aa2.09□□□□□ -2.07
CEP290-201ENST00000309041 WDR97A6NE52 1622 aa2.09□□□□□ -2.07
CEP290-201ENST00000309041 MCCD1P59942 119 aaPredicted RBP2.09□□□□□ -2.07
CEP290-201ENST00000309041 FOXD4L1Q9NU39 408 aa2.09□□□□□ -2.07
CEP290-201ENST00000309041 NISCHQ9Y2I1 1504 aa2.09□□□□□ -2.08
CEP290-201ENST00000309041 SYNPOQ8N3V7 929 aa2.08□□□□□ -2.08
CEP290-201ENST00000309041 DNTTIP2Q5QJE6 756 aaKnown RBP2.08□□□□□ -2.08
CEP290-201ENST00000309041 SCRIBQ14160 1630 aa2.08□□□□□ -2.08
CEP290-201ENST00000309041 PPP1R15AO75807 674 aaPredicted RBP2.07□□□□□ -2.08
CEP290-201ENST00000309041 VASPP50552 380 aaPredicted RBP2.07□□□□□ -2.08
CEP290-201ENST00000309041 RNF216Q9NWF9 866 aaPredicted RBP2.07□□□□□ -2.08
CEP290-201ENST00000309041 ZMYND15Q9H091 742 aa2.07□□□□□ -2.08
CEP290-201ENST00000309041 PPM1GO15355 546 aaPredicted RBP2.07□□□□□ -2.08
CEP290-201ENST00000309041 CHRM1P11229 460 aaPredicted RBP2.07□□□□□ -2.08
CEP290-201ENST00000309041 HNRNPUQ00839 825 aaKnown RBP eCLIP2.07□□□□□ -2.08
CEP290-201ENST00000309041 MAPK8IP2Q13387 824 aaPredicted RBP2.07□□□□□ -2.08
CEP290-201ENST00000309041 NOM1Q5C9Z4 860 aaKnown RBP2.07□□□□□ -2.08
CEP290-201ENST00000309041 VGLL3A8MV65 326 aa2.07□□□□□ -2.08
CEP290-201ENST00000309041 SP100P23497 879 aaPredicted RBP2.06□□□□□ -2.08
CEP290-201ENST00000309041 ZNF526Q8TF50 670 aaPredicted RBP2.06□□□□□ -2.08
CEP290-201ENST00000309041 DIXDC1Q155Q3 683 aa2.06□□□□□ -2.08
CEP290-201ENST00000309041 ATF5Q9Y2D1 282 aaPredicted RBP2.06□□□□□ -2.08
CEP290-201ENST00000309041 HLTFQ14527 1009 aaKnown RBP eCLIP2.06□□□□□ -2.08
CEP290-201ENST00000309041 CCDC6Q16204 474 aa2.06□□□□□ -2.08
CEP290-201ENST00000309041 SKIDA1Q1XH10 827 aa2.06□□□□□ -2.08
CEP290-201ENST00000309041 NKX1-1Q15270 411 aaPredicted RBP2.05□□□□□ -2.08
CEP290-201ENST00000309041 FBXO41Q8TF61 875 aa2.05□□□□□ -2.08
CEP290-201ENST00000309041 MYCNP04198 464 aaPredicted RBP2.05□□□□□ -2.08
CEP290-201ENST00000309041 GTPBP6O43824 516 aaPredicted RBP2.05□□□□□ -2.08
CEP290-201ENST00000309041 UNC13AQ9UPW8 1703 aa2.05□□□□□ -2.08
CEP290-201ENST00000309041 STK11IPQ8N1F8 1099 aa2.05□□□□□ -2.08
CEP290-201ENST00000309041 HMGB3O15347 200 aaKnown RBP2.05□□□□□ -2.08
CEP290-201ENST00000309041 FAM161AQ3B820 660 aa2.05□□□□□ -2.08
CEP290-201ENST00000309041 P3H3Q8IVL6 736 aa2.04□□□□□ -2.08
CEP290-201ENST00000309041 OXER1Q8TDS5 423 aa2.04□□□□□ -2.08
CEP290-201ENST00000309041 SMYD5Q6GMV2 418 aa2.03□□□□□ -2.08
CEP290-201ENST00000309041 AMOTL2Q9Y2J4 779 aa2.03□□□□□ -2.08
CEP290-201ENST00000309041 RNF25Q96BH1 459 aaPredicted RBP2.03□□□□□ -2.08
CEP290-201ENST00000309041 C11orf16Q9NQ32 467 aa2.03□□□□□ -2.08
CEP290-201ENST00000309041 ATP1B4Q9UN42 357 aaPredicted RBP2.03□□□□□ -2.08
CEP290-201ENST00000309041 LOC105371045A0A1W2PR82 267 aa2.03□□□□□ -2.08
CEP290-201ENST00000309041 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.03□□□□□ -2.08
CEP290-201ENST00000309041 COL19A1Q14993 1142 aa2.03□□□□□ -2.09
CEP290-201ENST00000309041 AXDND1Q5T1B0 1012 aaPredicted RBP2.03□□□□□ -2.09
CEP290-201ENST00000309041 SRCIN1Q9C0H9 1055 aa2.03□□□□□ -2.09
CEP290-201ENST00000309041 DMRT2Q9Y5R5 561 aa2.02□□□□□ -2.09
CEP290-201ENST00000309041 LDLRAD1Q5T700 205 aa2.02□□□□□ -2.09
CEP290-201ENST00000309041 MEX3CQ5U5Q3 659 aaKnown RBP2.02□□□□□ -2.09
CEP290-201ENST00000309041 BRPF3Q9ULD4 1205 aa2.02□□□□□ -2.09
CEP290-201ENST00000309041 FAM43AQ8N2R8 423 aa2.02□□□□□ -2.09
CEP290-201ENST00000309041 GOPCQ9HD26 462 aa2.02□□□□□ -2.09
CEP290-201ENST00000309041 C1orf115Q9H7X2 142 aa2.02□□□□□ -2.09
CEP290-201ENST00000309041 IRX6P78412 446 aaPredicted RBP2.01□□□□□ -2.09
CEP290-201ENST00000309041 FNBP4Q8N3X1 1017 aaPredicted RBP2.01□□□□□ -2.09
CEP290-201ENST00000309041 ZNF76P36508 570 aa2.01□□□□□ -2.09
CEP290-201ENST00000309041 GLIPR1L2Q4G1C9 344 aa2.01□□□□□ -2.09
CEP290-201ENST00000309041 SSUH2Q9Y2M2 353 aa2□□□□□ -2.09
CEP290-201ENST00000309041 CAMK2BQ13554 666 aa2□□□□□ -2.09
CEP290-201ENST00000309041 RBM42Q9BTD8 480 aaKnown RBP2□□□□□ -2.09
CEP290-201ENST00000309041 GJA5P36382 358 aa2□□□□□ -2.09
CEP290-201ENST00000309041 CDCA7LQ96GN5 454 aa2□□□□□ -2.09
CEP290-201ENST00000309041 ZCCHC6Q5VYS8 1495 aaKnown RBP1.99□□□□□ -2.09
CEP290-201ENST00000309041 LZTS3O60299 673 aaPredicted RBP1.99□□□□□ -2.09
CEP290-201ENST00000309041 SOGA3Q5TF21 947 aa1.99□□□□□ -2.09
CEP290-201ENST00000309041 NFATC2IPQ8NCF5 419 aa1.99□□□□□ -2.09
CEP290-201ENST00000309041 PRM3Q9NNZ6 103 aa1.99□□□□□ -2.09
CEP290-201ENST00000309041 GIPC1O14908 333 aa1.99□□□□□ -2.09
CEP290-201ENST00000309041 PMLP29590 882 aa1.99□□□□□ -2.09
CEP290-201ENST00000309041 PNMA1Q8ND90 353 aa1.99□□□□□ -2.09
CEP290-201ENST00000309041 GSE1Q14687 1217 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms