RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 EFCAB5A4FU69 1503 aa36.57■■■■□ 3.44
RFWD2-201ENST00000308769 HNRNPUL2Q1KMD3 747 aaKnown RBP36.56■■■■□ 3.44
RFWD2-201ENST00000308769 P3H3Q8IVL6 736 aa36.55■■■■□ 3.44
RFWD2-201ENST00000308769 AQRO60306 1485 aaKnown RBP eCLIP36.53■■■■□ 3.441e-7■■■■□ 21.1
RFWD2-201ENST00000308769 FHOD3Q2V2M9 1422 aa36.52■■■■□ 3.44
RFWD2-201ENST00000308769 TIAM1Q13009 1591 aa36.52■■■■□ 3.44
RFWD2-201ENST00000308769 PCF11O94913 1555 aaKnown RBP36.51■■■■□ 3.44
RFWD2-201ENST00000308769 FHAD1B1AJZ9 1412 aa36.51■■■■□ 3.43
RFWD2-201ENST00000308769 ERCC6Q03468 1493 aa36.47■■■■□ 3.43
RFWD2-201ENST00000308769 MAP3K1Q13233 1512 aa36.46■■■■□ 3.43
RFWD2-201ENST00000308769 IFT140Q96RY7 1462 aa36.45■■■■□ 3.42
RFWD2-201ENST00000308769 ADAMTS12P58397 1594 aa36.42■■■■□ 3.42
RFWD2-201ENST00000308769 ZNF608Q9ULD9 1512 aaPredicted RBP36.41■■■■□ 3.42
RFWD2-201ENST00000308769 CFAP43Q8NDM7 1665 aa36.4■■■■□ 3.42
RFWD2-201ENST00000308769 SAMD9Q5K651 1589 aa36.38■■■■□ 3.42
RFWD2-201ENST00000308769 THOC2Q8NI27 1593 aaKnown RBP36.38■■■■□ 3.42
RFWD2-201ENST00000308769 GRIN2BQ13224 1484 aa36.37■■■■□ 3.41
RFWD2-201ENST00000308769 RRBP1Q9P2E9 1410 aaKnown RBP36.36■■■■□ 3.41
RFWD2-201ENST00000308769 FYCO1Q9BQS8 1478 aa36.33■■■■□ 3.41
RFWD2-201ENST00000308769 LRRC9Q6ZRR7 1453 aa36.32■■■■□ 3.4
RFWD2-201ENST00000308769 CASKIN1Q8WXD9 1431 aa36.29■■■■□ 3.4
RFWD2-201ENST00000308769 EIF4G3O43432 1585 aaKnown RBP36.26■■■■□ 3.4
RFWD2-201ENST00000308769 FMN1Q68DA7 1419 aa36.26■■■■□ 3.39
RFWD2-201ENST00000308769 ATP1B4Q9UN42 357 aaPredicted RBP36.26■■■■□ 3.39
RFWD2-201ENST00000308769 SNAPC4Q5SXM2 1469 aa36.22■■■■□ 3.39
RFWD2-201ENST00000308769 CCNB3Q8WWL7 1395 aa36.21■■■■□ 3.39
RFWD2-201ENST00000308769 IQGAP2Q13576 1575 aa36.19■■■■□ 3.38
RFWD2-201ENST00000308769 LRRIQ1Q96JM4 1722 aa36.13■■■■□ 3.38
RFWD2-201ENST00000308769 PHLDB1Q86UU1 1377 aa36.1■■■■□ 3.37
RFWD2-201ENST00000308769 GRIN2AQ12879 1464 aa35.99■■■■□ 3.35
RFWD2-201ENST00000308769 ITGAEP38570 1179 aa35.96■■■■□ 3.35
RFWD2-201ENST00000308769 UGGT2Q9NYU1 1516 aa35.95■■■■□ 3.35
RFWD2-201ENST00000308769 MAGI1Q96QZ7 1491 aaPredicted RBP35.95■■■■□ 3.35
RFWD2-201ENST00000308769 KIAA0586Q9BVV6 1533 aa35.92■■■■□ 3.34
RFWD2-201ENST00000308769 MTUS2Q5JR59 1369 aa35.88■■■■□ 3.33
RFWD2-201ENST00000308769 DHX57Q6P158 1386 aaKnown RBP35.86■■■■□ 3.33
RFWD2-201ENST00000308769 HECW1Q76N89 1606 aa35.85■■■■□ 3.33
RFWD2-201ENST00000308769 SYNJ2O15056 1496 aa35.85■■■■□ 3.33
RFWD2-201ENST00000308769 FAM50AQ14320 339 aaKnown RBP35.83■■■■□ 3.33
RFWD2-201ENST00000308769 KIAA0556O60303 1618 aa35.83■■■■□ 3.33
RFWD2-201ENST00000308769 CEP170Q5SW79 1584 aa35.81■■■■□ 3.32
RFWD2-201ENST00000308769 DISP1Q96F81 1524 aa35.8■■■■□ 3.32
RFWD2-201ENST00000308769 CCDC18Q5T9S5 1454 aa35.79■■■■□ 3.32
RFWD2-201ENST00000308769 CHMP7Q8WUX9 453 aaPredicted RBP35.78■■■■□ 3.32
RFWD2-201ENST00000308769 EHBP1L1Q8N3D4 1523 aa35.78■■■■□ 3.32
RFWD2-201ENST00000308769 SUPT6HQ7KZ85 1726 aaKnown RBP35.77■■■■□ 3.32
RFWD2-201ENST00000308769 MAGI3Q5TCQ9 1506 aa35.76■■■■□ 3.32
RFWD2-201ENST00000308769 FGD6Q6ZV73 1430 aa35.73■■■■□ 3.31
RFWD2-201ENST00000308769 NCOA2Q15596 1464 aa35.73■■■■□ 3.31
RFWD2-201ENST00000308769 FBLN2P98095 1184 aa35.72■■■■□ 3.31
RFWD2-201ENST00000308769 EPRSP07814 1512 aaKnown RBP35.72■■■■□ 3.31
RFWD2-201ENST00000308769 RAB3GAP2Q9H2M9 1393 aa35.7■■■■□ 3.31
RFWD2-201ENST00000308769 CLSPNQ9HAW4 1339 aa35.69■■■■□ 3.3
RFWD2-201ENST00000308769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.69■■■■□ 3.3
RFWD2-201ENST00000308769 CDK13Q14004 1512 aaKnown RBP35.68■■■■□ 3.3
RFWD2-201ENST00000308769 NUP160Q12769 1436 aa35.64■■■■□ 3.3
RFWD2-201ENST00000308769 SETD5Q9C0A6 1442 aa35.64■■■■□ 3.3
RFWD2-201ENST00000308769 MYOM3Q5VTT5 1437 aa35.62■■■■□ 3.29
RFWD2-201ENST00000308769 ARHGEF11O15085 1522 aa35.62■■■■□ 3.29
RFWD2-201ENST00000308769 RAPGEF6Q8TEU7 1601 aa35.58■■■■□ 3.29
RFWD2-201ENST00000308769 ARID3CA6NKF2 412 aa35.57■■■■□ 3.29
RFWD2-201ENST00000308769 NUP153P49790 1475 aaKnown RBP35.52■■■■□ 3.28
RFWD2-201ENST00000308769 PTPN23Q9H3S7 1636 aa35.51■■■■□ 3.28
RFWD2-201ENST00000308769 MAPKBP1O60336 1514 aa35.46■■■■□ 3.27
RFWD2-201ENST00000308769 JPH4Q96JJ6 628 aa35.45■■■■□ 3.27
RFWD2-201ENST00000308769 ZNF316A6NFI3 1004 aaPredicted RBP35.44■■■■□ 3.26
RFWD2-201ENST00000308769 PTPRKQ15262 1439 aa35.44■■■■□ 3.26
RFWD2-201ENST00000308769 CARMIL2Q6F5E8 1435 aa35.42■■■■□ 3.26
RFWD2-201ENST00000308769 PLB1Q6P1J6 1458 aa35.4■■■■□ 3.26
RFWD2-201ENST00000308769 CHD1O14646 1710 aa35.39■■■■□ 3.26
RFWD2-201ENST00000308769 DIEXFQ68CQ4 756 aaKnown RBP35.38■■■■□ 3.25
RFWD2-201ENST00000308769 TCOF1Q13428 1488 aaKnown RBP35.36■■■■□ 3.25
RFWD2-201ENST00000308769 HFM1A2PYH4 1435 aa35.31■■■■□ 3.24
RFWD2-201ENST00000308769 MIA2Q96PC5 1412 aa35.28■■■■□ 3.24
RFWD2-201ENST00000308769 NAIPQ13075 1403 aa35.23■■■■□ 3.23
RFWD2-201ENST00000308769 CDK11AQ9UQ88 783 aaPredicted RBP35.22■■■■□ 3.23
RFWD2-201ENST00000308769 ABCA8O94911 1581 aa35.21■■■■□ 3.23
RFWD2-201ENST00000308769 PRG4Q92954 1404 aaPredicted RBP35.2■■■■□ 3.22
RFWD2-201ENST00000308769 TROQ12816 1431 aaPredicted RBP35.18■■■■□ 3.22
RFWD2-201ENST00000308769 GCC2Q8IWJ2 1684 aa35.15■■■■□ 3.22
RFWD2-201ENST00000308769 ADCY10Q96PN6 1610 aa35.13■■■■□ 3.21
RFWD2-201ENST00000308769 KIF14Q15058 1648 aa35.13■■■■□ 3.21
RFWD2-201ENST00000308769 CHIC2Q9UKJ5 165 aa35.11■■■■□ 3.21
RFWD2-201ENST00000308769 UACAQ9BZF9 1416 aa35.09■■■■□ 3.21
RFWD2-201ENST00000308769 SIN3AQ96ST3 1273 aa35.08■■■■□ 3.21
RFWD2-201ENST00000308769 SHROOM2Q13796 1616 aa35.08■■■■□ 3.21
RFWD2-201ENST00000308769 RRP7BPQ9NSQ0 103 aa35.07■■■■□ 3.2
RFWD2-201ENST00000308769 ITSN2Q9NZM3 1697 aa35.07■■■■□ 3.2
RFWD2-201ENST00000308769 DNMT1P26358 1616 aaKnown RBP35.05■■■■□ 3.2
RFWD2-201ENST00000308769 AKNAQ7Z591 1439 aa35.05■■■■□ 3.2
RFWD2-201ENST00000308769 ATP10BO94823 1461 aa35.03■■■■□ 3.2
RFWD2-201ENST00000308769 ZNF644Q9H582 1327 aaPredicted RBP35.02■■■■□ 3.2
RFWD2-201ENST00000308769 NEUROD1Q13562 356 aa35.02■■■■□ 3.2
RFWD2-201ENST00000308769 PTPRGP23470 1445 aa35.01■■■■□ 3.2
RFWD2-201ENST00000308769 DAPK1P53355 1430 aa35.01■■■■□ 3.2
RFWD2-201ENST00000308769 KDM6BO15054 1643 aa35.01■■■■□ 3.19
RFWD2-201ENST00000308769 GPATCH8Q9UKJ3 1502 aaKnown RBP34.97■■■■□ 3.19
RFWD2-201ENST00000308769 ABCC5O15440 1437 aa34.95■■■■□ 3.19
RFWD2-201ENST00000308769 CAMSAP2Q08AD1 1489 aa34.95■■■■□ 3.18
RFWD2-201ENST00000308769 ERCC6L2Q5T890 1561 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms