RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 CLSPNQ9HAW4 1339 aa15.65■□□□□ 0.1
PHTF2-203ENST00000307305 NBR1Q14596 966 aa15.64■□□□□ 0.09
PHTF2-203ENST00000307305 ANP32EQ9BTT0 268 aa15.64■□□□□ 0.09
PHTF2-203ENST00000307305 KIF27Q86VH2 1401 aa15.64■□□□□ 0.09
PHTF2-203ENST00000307305 RAB3GAP2Q9H2M9 1393 aa15.64■□□□□ 0.09
PHTF2-203ENST00000307305 FOXD1Q16676 465 aa15.6■□□□□ 0.09
PHTF2-203ENST00000307305 RTL5Q5HYW3 569 aaPredicted RBP15.59■□□□□ 0.09
PHTF2-203ENST00000307305 KDM2AQ9Y2K7 1162 aa15.58■□□□□ 0.09
PHTF2-203ENST00000307305 SMARCA2P51531 1590 aa15.58■□□□□ 0.08
PHTF2-203ENST00000307305 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
PHTF2-203ENST00000307305 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
PHTF2-203ENST00000307305 RBM19Q9Y4C8 960 aaKnown RBP15.56■□□□□ 0.08
PHTF2-203ENST00000307305 B4GALNT3Q6L9W6 998 aa15.55■□□□□ 0.08
PHTF2-203ENST00000307305 DAXXQ9UER7 740 aaPredicted RBP15.55■□□□□ 0.08
PHTF2-203ENST00000307305 CUX2O14529 1486 aa15.55■□□□□ 0.08
PHTF2-203ENST00000307305 EIF4G2P78344 907 aaKnown RBP eCLIP15.54■□□□□ 0.083e-7■■■□□ 17
PHTF2-203ENST00000307305 CARMIL1Q5VZK9 1371 aa15.51■□□□□ 0.07
PHTF2-203ENST00000307305 CCDC136Q96JN2 1154 aa15.5■□□□□ 0.07
PHTF2-203ENST00000307305 SETD5Q9C0A6 1442 aa15.5■□□□□ 0.07
PHTF2-203ENST00000307305 TMC1Q8TDI8 760 aa15.47■□□□□ 0.07
PHTF2-203ENST00000307305 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
PHTF2-203ENST00000307305 HSPA5P11021 654 aaKnown RBP15.44■□□□□ 0.06
PHTF2-203ENST00000307305 ANP32AP39687 249 aaKnown RBP15.43■□□□□ 0.06
PHTF2-203ENST00000307305 ATAD2BQ9ULI0 1458 aa15.43■□□□□ 0.06
PHTF2-203ENST00000307305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.43■□□□□ 0.063e-8■■■■□ 20.1
PHTF2-203ENST00000307305 KIF21BO75037 1637 aa15.41■□□□□ 0.06
PHTF2-203ENST00000307305 SYNJ1O43426 1573 aa15.4■□□□□ 0.06
PHTF2-203ENST00000307305 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
PHTF2-203ENST00000307305 FHOD3Q2V2M9 1422 aa15.4■□□□□ 0.06
PHTF2-203ENST00000307305 RGL3Q3MIN7 710 aa15.39■□□□□ 0.05
PHTF2-203ENST00000307305 ARAP1Q96P48 1450 aa15.35■□□□□ 0.05
PHTF2-203ENST00000307305 TDRD9Q8NDG6 1382 aaKnown RBP15.34■□□□□ 0.05
PHTF2-203ENST00000307305 SENP3Q9H4L4 574 aaPredicted RBP15.34■□□□□ 0.05
PHTF2-203ENST00000307305 CCER2I3L3R5 266 aa15.33■□□□□ 0.04
PHTF2-203ENST00000307305 ZBTB47Q9UFB7 747 aaPredicted RBP15.32■□□□□ 0.04
PHTF2-203ENST00000307305 PHLDB1Q86UU1 1377 aa15.31■□□□□ 0.04
PHTF2-203ENST00000307305 L3MBTL2Q969R5 705 aa15.31■□□□□ 0.04
PHTF2-203ENST00000307305 PPP4R2Q9NY27 417 aa15.31■□□□□ 0.04
PHTF2-203ENST00000307305 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
PHTF2-203ENST00000307305 ARHGAP35Q9NRY4 1499 aa15.29■□□□□ 0.04
PHTF2-203ENST00000307305 CFDP1Q9UEE9 299 aaPredicted RBP15.25■□□□□ 0.03
PHTF2-203ENST00000307305 LAS1LQ9Y4W2 734 aaKnown RBP15.25■□□□□ 0.03
PHTF2-203ENST00000307305 MPHOSPH9Q99550 1183 aa15.25■□□□□ 0.03
PHTF2-203ENST00000307305 RTN4Q9NQC3 1192 aaKnown RBP15.25■□□□□ 0.03
PHTF2-203ENST00000307305 CARD11Q9BXL7 1154 aa15.25■□□□□ 0.03
PHTF2-203ENST00000307305 IGF1RP08069 1367 aa15.24■□□□□ 0.03
PHTF2-203ENST00000307305 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
PHTF2-203ENST00000307305 TIMELESSQ9UNS1 1208 aa15.23■□□□□ 0.03
PHTF2-203ENST00000307305 TSPY4P0CV99 314 aa15.23■□□□□ 0.03
PHTF2-203ENST00000307305 TSPY10P0CW01 314 aa15.23■□□□□ 0.03
PHTF2-203ENST00000307305 ARXQ96QS3 562 aa15.22■□□□□ 0.03
PHTF2-203ENST00000307305 CANXP27824 592 aaKnown RBP15.22■□□□□ 0.03
PHTF2-203ENST00000307305 CCDC184Q52MB2 194 aa15.21■□□□□ 0.03
PHTF2-203ENST00000307305 CHMP7Q8WUX9 453 aaPredicted RBP15.21■□□□□ 0.02
PHTF2-203ENST00000307305 CC2D1BQ5T0F9 858 aaKnown RBP15.2■□□□□ 0.02
PHTF2-203ENST00000307305 CHGAP10645 457 aaKnown RBP15.18■□□□□ 0.02
PHTF2-203ENST00000307305 DCAF11Q8TEB1 546 aa15.18■□□□□ 0.02
PHTF2-203ENST00000307305 NOP58Q9Y2X3 529 aaKnown RBP15.16■□□□□ 0.02
PHTF2-203ENST00000307305 DEKP35659 375 aaKnown RBP15.16■□□□□ 0.02
PHTF2-203ENST00000307305 PKD2Q13563 968 aa15.16■□□□□ 0.02
PHTF2-203ENST00000307305 WDR97A6NE52 1622 aa15.15■□□□□ 0.02
PHTF2-203ENST00000307305 EIF5BO60841 1220 aaKnown RBP15.14■□□□□ 0.01
PHTF2-203ENST00000307305 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
PHTF2-203ENST00000307305 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
PHTF2-203ENST00000307305 PRKRIP1Q9H875 184 aaPredicted RBP15.13■□□□□ 0.01
PHTF2-203ENST00000307305 RRBP1Q9P2E9 1410 aaKnown RBP15.13■□□□□ 0.01
PHTF2-203ENST00000307305 WASHC2AQ641Q2 1341 aa15.12■□□□□ 0.01
PHTF2-203ENST00000307305 ZNF644Q9H582 1327 aaPredicted RBP15.12■□□□□ 0.01
PHTF2-203ENST00000307305 PRXQ9BXM0 1461 aa15.12■□□□□ 0.01
PHTF2-203ENST00000307305 CCDC18Q5T9S5 1454 aa15.1■□□□□ 0.01
PHTF2-203ENST00000307305 PLEKHD1A6NEE1 506 aa15.1■□□□□ 0.01
PHTF2-203ENST00000307305 LRRC9Q6ZRR7 1453 aa15.1■□□□□ 0.01
PHTF2-203ENST00000307305 RGS3P49796 1198 aa15.09■□□□□ 0.01
PHTF2-203ENST00000307305 WDR43Q15061 677 aaKnown RBP eCLIP15.09■□□□□ 0.01
PHTF2-203ENST00000307305 NEUROD2Q15784 382 aa15.08■□□□□ 0.01
PHTF2-203ENST00000307305 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0.01
PHTF2-203ENST00000307305 FMN1Q68DA7 1419 aa15.08■□□□□ 0
PHTF2-203ENST00000307305 NEFMP07197 916 aa15.06■□□□□ 0
PHTF2-203ENST00000307305 CUX1P39880 1505 aa15.05■□□□□ -0
PHTF2-203ENST00000307305 TNNT2P45379 298 aaPredicted RBP15.05■□□□□ -0
PHTF2-203ENST00000307305 PLIN1O60240 522 aa15.04■□□□□ -0
PHTF2-203ENST00000307305 FGD6Q6ZV73 1430 aa15.02□□□□□ -0.01
PHTF2-203ENST00000307305 MSH5O43196 834 aa15.02□□□□□ -0.01
PHTF2-203ENST00000307305 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
PHTF2-203ENST00000307305 C11orf95C9JLR9 678 aaPredicted RBP15.01□□□□□ -0.01
PHTF2-203ENST00000307305 NBPF8Q3BBV2 869 aa15□□□□□ -0.01
PHTF2-203ENST00000307305 TOP2BQ02880 1626 aa15□□□□□ -0.01
PHTF2-203ENST00000307305 NUDCQ9Y266 331 aa14.99□□□□□ -0.01
PHTF2-203ENST00000307305 KIF7Q2M1P5 1343 aa14.98□□□□□ -0.01
PHTF2-203ENST00000307305 FANCD2Q9BXW9 1451 aa14.98□□□□□ -0.01
PHTF2-203ENST00000307305 NUP155O75694 1391 aa14.98□□□□□ -0.01
PHTF2-203ENST00000307305 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.017e-7■■■■□ 22.3
PHTF2-203ENST00000307305 EXOC6Q8TAG9 804 aa14.98□□□□□ -0.01
PHTF2-203ENST00000307305 SLC4A3P48751 1232 aa14.97□□□□□ -0.01
PHTF2-203ENST00000307305 RCAN3Q9UKA8 241 aa14.97□□□□□ -0.01
PHTF2-203ENST00000307305 ERICH3Q5RHP9 1530 aa14.96□□□□□ -0.01
PHTF2-203ENST00000307305 KNSTRNQ9Y448 316 aa14.96□□□□□ -0.02
PHTF2-203ENST00000307305 BICRAQ9NZM4 1560 aa14.95□□□□□ -0.02
PHTF2-203ENST00000307305 PAK3O75914 559 aaPredicted RBP14.95□□□□□ -0.02
PHTF2-203ENST00000307305 FRAT1Q92837 279 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms