RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 CEP170Q5SW79 1584 aa13.13□□□□□ -0.31
TM4SF1-201ENST00000305366 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
TM4SF1-201ENST00000305366 PRG4Q92954 1404 aaPredicted RBP13.12□□□□□ -0.31
TM4SF1-201ENST00000305366 TTBK1Q5TCY1 1321 aaPredicted RBP13.12□□□□□ -0.31
TM4SF1-201ENST00000305366 BIVM-ERCC5R4GMW8 1640 aa13.1□□□□□ -0.31
TM4SF1-201ENST00000305366 ERICH3Q5RHP9 1530 aa13.09□□□□□ -0.31
TM4SF1-201ENST00000305366 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
TM4SF1-201ENST00000305366 IGF1RP08069 1367 aa13.06□□□□□ -0.32
TM4SF1-201ENST00000305366 FAM69CQ0P6D2 419 aa13.04□□□□□ -0.32
TM4SF1-201ENST00000305366 KIF27Q86VH2 1401 aa13.01□□□□□ -0.33
TM4SF1-201ENST00000305366 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
TM4SF1-201ENST00000305366 CARMIL1Q5VZK9 1371 aa12.98□□□□□ -0.33
TM4SF1-201ENST00000305366 KIAA0586Q9BVV6 1533 aa12.95□□□□□ -0.34
TM4SF1-201ENST00000305366 PTPRGP23470 1445 aa12.93□□□□□ -0.34
TM4SF1-201ENST00000305366 RUSC2Q8N2Y8 1516 aa12.92□□□□□ -0.34
TM4SF1-201ENST00000305366 ABCC10Q5T3U5 1492 aa12.89□□□□□ -0.35
TM4SF1-201ENST00000305366 TNIKQ9UKE5 1360 aa12.87□□□□□ -0.35
TM4SF1-201ENST00000305366 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
TM4SF1-201ENST00000305366 ADCY10Q96PN6 1610 aa12.85□□□□□ -0.35
TM4SF1-201ENST00000305366 CUL7Q14999 1698 aa12.83□□□□□ -0.36
TM4SF1-201ENST00000305366 MAPKBP1O60336 1514 aa12.81□□□□□ -0.36
TM4SF1-201ENST00000305366 KIF13AQ9H1H9 1805 aa12.79□□□□□ -0.36
TM4SF1-201ENST00000305366 RAPGEF2Q9Y4G8 1499 aa12.79□□□□□ -0.36
TM4SF1-201ENST00000305366 ASXL2Q76L83 1435 aa12.78□□□□□ -0.36
TM4SF1-201ENST00000305366 UACAQ9BZF9 1416 aa12.78□□□□□ -0.36
TM4SF1-201ENST00000305366 DIP2BQ9P265 1576 aa12.78□□□□□ -0.36
TM4SF1-201ENST00000305366 ARID3CA6NKF2 412 aa12.77□□□□□ -0.36
TM4SF1-201ENST00000305366 ABCC2Q92887 1545 aa12.77□□□□□ -0.37
TM4SF1-201ENST00000305366 KDM4FA0A1W2PPD8 638 aa12.76□□□□□ -0.37
TM4SF1-201ENST00000305366 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
TM4SF1-201ENST00000305366 KCNH8Q96L42 1107 aa12.76□□□□□ -0.37
TM4SF1-201ENST00000305366 IQGAP2Q13576 1575 aa12.76□□□□□ -0.37
TM4SF1-201ENST00000305366 DISP1Q96F81 1524 aa12.76□□□□□ -0.37
TM4SF1-201ENST00000305366 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
TM4SF1-201ENST00000305366 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
TM4SF1-201ENST00000305366 KDM6BO15054 1643 aa12.72□□□□□ -0.37
TM4SF1-201ENST00000305366 TSPOAP1O95153 1857 aa12.71□□□□□ -0.37
TM4SF1-201ENST00000305366 UHRF1BP1LA0JNW5 1464 aa12.7□□□□□ -0.38
TM4SF1-201ENST00000305366 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
TM4SF1-201ENST00000305366 UGGT2Q9NYU1 1516 aa12.68□□□□□ -0.38
TM4SF1-201ENST00000305366 EPRSP07814 1512 aaKnown RBP12.67□□□□□ -0.38
TM4SF1-201ENST00000305366 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
TM4SF1-201ENST00000305366 KDM5BQ9UGL1 1544 aa12.66□□□□□ -0.38
TM4SF1-201ENST00000305366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
TM4SF1-201ENST00000305366 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
TM4SF1-201ENST00000305366 EHMT2Q96KQ7 1210 aa12.65□□□□□ -0.38
TM4SF1-201ENST00000305366 COL17A1Q9UMD9 1497 aaPredicted RBP12.65□□□□□ -0.38
TM4SF1-201ENST00000305366 KIAA0556O60303 1618 aa12.64□□□□□ -0.39
TM4SF1-201ENST00000305366 GOLGA3Q08378 1498 aa12.62□□□□□ -0.39
TM4SF1-201ENST00000305366 PRXQ9BXM0 1461 aa12.62□□□□□ -0.39
TM4SF1-201ENST00000305366 GLI2P10070 1586 aa12.62□□□□□ -0.39
TM4SF1-201ENST00000305366 WDR7Q9Y4E6 1490 aa12.6□□□□□ -0.39
TM4SF1-201ENST00000305366 CD109Q6YHK3 1445 aa12.6□□□□□ -0.39
TM4SF1-201ENST00000305366 ZCCHC11Q5TAX3 1644 aaKnown RBP12.6□□□□□ -0.39
TM4SF1-201ENST00000305366 TEX14Q8IWB6 1497 aa12.59□□□□□ -0.39
TM4SF1-201ENST00000305366 ADGRL1O94910 1474 aa12.56□□□□□ -0.4
TM4SF1-201ENST00000305366 PPRC1Q5VV67 1664 aaKnown RBP12.55□□□□□ -0.4
TM4SF1-201ENST00000305366 ABCA8O94911 1581 aa12.54□□□□□ -0.4
TM4SF1-201ENST00000305366 ATP10BO94823 1461 aa12.53□□□□□ -0.4
TM4SF1-201ENST00000305366 MAP3K4Q9Y6R4 1608 aa12.53□□□□□ -0.4
TM4SF1-201ENST00000305366 RAPGEF3O95398 923 aa12.52□□□□□ -0.41
TM4SF1-201ENST00000305366 ATP1B4Q9UN42 357 aaPredicted RBP12.52□□□□□ -0.41
TM4SF1-201ENST00000305366 CTTNBP2Q8WZ74 1663 aa12.5□□□□□ -0.41
TM4SF1-201ENST00000305366 MAGI3Q5TCQ9 1506 aa12.5□□□□□ -0.41
TM4SF1-201ENST00000305366 UBTFP17480 764 aaKnown RBP12.49□□□□□ -0.41
TM4SF1-201ENST00000305366 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
TM4SF1-201ENST00000305366 PLEKHD1A6NEE1 506 aa12.48□□□□□ -0.41
TM4SF1-201ENST00000305366 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
TM4SF1-201ENST00000305366 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
TM4SF1-201ENST00000305366 PLPPR3Q6T4P5 718 aa12.45□□□□□ -0.42
TM4SF1-201ENST00000305366 HRCP23327 699 aa12.44□□□□□ -0.42
TM4SF1-201ENST00000305366 EEA1Q15075 1411 aa12.44□□□□□ -0.42
TM4SF1-201ENST00000305366 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
TM4SF1-201ENST00000305366 PIAS4Q8N2W9 510 aaPredicted RBP12.43□□□□□ -0.42
TM4SF1-201ENST00000305366 CFAP43Q8NDM7 1665 aa12.41□□□□□ -0.42
TM4SF1-201ENST00000305366 NUP153P49790 1475 aaKnown RBP12.41□□□□□ -0.42
TM4SF1-201ENST00000305366 CACNB1Q02641 598 aaPredicted RBP12.41□□□□□ -0.42
TM4SF1-201ENST00000305366 ARAP3Q8WWN8 1544 aa12.39□□□□□ -0.43
TM4SF1-201ENST00000305366 PHLDB1Q86UU1 1377 aa12.39□□□□□ -0.43
TM4SF1-201ENST00000305366 RAPGEF6Q8TEU7 1601 aa12.39□□□□□ -0.43
TM4SF1-201ENST00000305366 SAMD9Q5K651 1589 aa12.39□□□□□ -0.43
TM4SF1-201ENST00000305366 MLECQ14165 292 aa12.37□□□□□ -0.43
TM4SF1-201ENST00000305366 HECW2Q9P2P5 1572 aa12.36□□□□□ -0.43
TM4SF1-201ENST00000305366 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
TM4SF1-201ENST00000305366 AKNAQ7Z591 1439 aa12.35□□□□□ -0.43
TM4SF1-201ENST00000305366 NEO1Q92859 1461 aa12.34□□□□□ -0.43
TM4SF1-201ENST00000305366 KIF21BO75037 1637 aa12.34□□□□□ -0.43
TM4SF1-201ENST00000305366 ABCA9Q8IUA7 1624 aa12.34□□□□□ -0.43
TM4SF1-201ENST00000305366 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
TM4SF1-201ENST00000305366 DENND4BO75064 1496 aaPredicted RBP12.33□□□□□ -0.44
TM4SF1-201ENST00000305366 FANCAO15360 1455 aa12.32□□□□□ -0.44
TM4SF1-201ENST00000305366 CDK13Q14004 1512 aaKnown RBP12.32□□□□□ -0.44
TM4SF1-201ENST00000305366 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
TM4SF1-201ENST00000305366 PTPRMP28827 1452 aa12.31□□□□□ -0.44
TM4SF1-201ENST00000305366 EFCAB2Q5VUJ9 269 aa12.3□□□□□ -0.44
TM4SF1-201ENST00000305366 HSPA2P54652 639 aa12.28□□□□□ -0.44
TM4SF1-201ENST00000305366 SCAPERQ9BY12 1400 aa12.28□□□□□ -0.44
TM4SF1-201ENST00000305366 EFCAB5A4FU69 1503 aa12.28□□□□□ -0.44
TM4SF1-201ENST00000305366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.28□□□□□ -0.44
TM4SF1-201ENST00000305366 YEATS2Q9ULM3 1422 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms