RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 CARMIL1Q5VZK9 1371 aa27.18■■□□□ 1.94
SRGAP2C-201ENST00000304465 PRG4Q92954 1404 aaPredicted RBP27.17■■□□□ 1.94
SRGAP2C-201ENST00000304465 RUSC2Q8N2Y8 1516 aa27.14■■□□□ 1.94
SRGAP2C-201ENST00000304465 KIAA0586Q9BVV6 1533 aa27.11■■□□□ 1.93
SRGAP2C-201ENST00000304465 RAPGEF2Q9Y4G8 1499 aa26.97■■□□□ 1.91
SRGAP2C-201ENST00000304465 CHIC1Q5VXU3 224 aa26.93■■□□□ 1.9
SRGAP2C-201ENST00000304465 CARMIL2Q6F5E8 1435 aa26.89■■□□□ 1.9
SRGAP2C-201ENST00000304465 IQGAP2Q13576 1575 aa26.88■■□□□ 1.89
SRGAP2C-201ENST00000304465 NPM1P06748 294 aaKnown RBP eCLIP26.88■■□□□ 1.89
SRGAP2C-201ENST00000304465 TTBK1Q5TCY1 1321 aaPredicted RBP26.83■■□□□ 1.89
SRGAP2C-201ENST00000304465 PTPRGP23470 1445 aa26.82■■□□□ 1.88
SRGAP2C-201ENST00000304465 TNIKQ9UKE5 1360 aa26.8■■□□□ 1.88
SRGAP2C-201ENST00000304465 PRXQ9BXM0 1461 aa26.75■■□□□ 1.87
SRGAP2C-201ENST00000304465 CSRNP3Q8WYN3 585 aa26.73■■□□□ 1.87
SRGAP2C-201ENST00000304465 ADCY10Q96PN6 1610 aa26.72■■□□□ 1.87
SRGAP2C-201ENST00000304465 UGGT2Q9NYU1 1516 aa26.71■■□□□ 1.87
SRGAP2C-201ENST00000304465 DISP1Q96F81 1524 aa26.7■■□□□ 1.86
SRGAP2C-201ENST00000304465 EEA1Q15075 1411 aa26.68■■□□□ 1.86
SRGAP2C-201ENST00000304465 CTTNBP2Q8WZ74 1663 aa26.66■■□□□ 1.86
SRGAP2C-201ENST00000304465 MAPKBP1O60336 1514 aa26.65■■□□□ 1.86
SRGAP2C-201ENST00000304465 FAM69CQ0P6D2 419 aa26.62■■□□□ 1.85
SRGAP2C-201ENST00000304465 GOLGA3Q08378 1498 aa26.62■■□□□ 1.85
SRGAP2C-201ENST00000304465 KIAA0556O60303 1618 aa26.61■■□□□ 1.85
SRGAP2C-201ENST00000304465 UACAQ9BZF9 1416 aa26.61■■□□□ 1.85
SRGAP2C-201ENST00000304465 FAM9AQ8IZU1 332 aaPredicted RBP26.61■■□□□ 1.85
SRGAP2C-201ENST00000304465 ABCC10Q5T3U5 1492 aa26.59■■□□□ 1.85
SRGAP2C-201ENST00000304465 ABCC2Q92887 1545 aa26.58■■□□□ 1.85
SRGAP2C-201ENST00000304465 UHRF1BP1LA0JNW5 1464 aa26.56■■□□□ 1.84
SRGAP2C-201ENST00000304465 KIF13AQ9H1H9 1805 aa26.54■■□□□ 1.84
SRGAP2C-201ENST00000304465 DIP2BQ9P265 1576 aa26.5■■□□□ 1.83
SRGAP2C-201ENST00000304465 ASXL2Q76L83 1435 aa26.47■■□□□ 1.83
SRGAP2C-201ENST00000304465 PLB1Q6P1J6 1458 aa26.47■■□□□ 1.83
SRGAP2C-201ENST00000304465 P3H3Q8IVL6 736 aa26.43■■□□□ 1.82
SRGAP2C-201ENST00000304465 KDM5BQ9UGL1 1544 aa26.43■■□□□ 1.82
SRGAP2C-201ENST00000304465 RANGAP1P46060 587 aaPredicted RBP26.39■■□□□ 1.82
SRGAP2C-201ENST00000304465 KIF21BO75037 1637 aa26.36■■□□□ 1.81
SRGAP2C-201ENST00000304465 ZCCHC11Q5TAX3 1644 aaKnown RBP26.36■■□□□ 1.81
SRGAP2C-201ENST00000304465 ABCA8O94911 1581 aa26.34■■□□□ 1.81
SRGAP2C-201ENST00000304465 EHMT2Q96KQ7 1210 aa26.31■■□□□ 1.8
SRGAP2C-201ENST00000304465 SAMD9Q5K651 1589 aa26.3■■□□□ 1.8
SRGAP2C-201ENST00000304465 UBTFP17480 764 aaKnown RBP26.3■■□□□ 1.8
SRGAP2C-201ENST00000304465 TSPOAP1O95153 1857 aa26.29■■□□□ 1.8
SRGAP2C-201ENST00000304465 GLI2P10070 1586 aa26.29■■□□□ 1.8
SRGAP2C-201ENST00000304465 EPRSP07814 1512 aaKnown RBP26.28■■□□□ 1.8
SRGAP2C-201ENST00000304465 WDR7Q9Y4E6 1490 aa26.27■■□□□ 1.8
SRGAP2C-201ENST00000304465 ARID3CA6NKF2 412 aa26.23■■□□□ 1.79
SRGAP2C-201ENST00000304465 KCNH8Q96L42 1107 aa26.22■■□□□ 1.79
SRGAP2C-201ENST00000304465 KDM6BO15054 1643 aa26.21■■□□□ 1.79
SRGAP2C-201ENST00000304465 FHOD3Q2V2M9 1422 aa26.2■■□□□ 1.79
SRGAP2C-201ENST00000304465 EFCAB5A4FU69 1503 aa26.18■■□□□ 1.78
SRGAP2C-201ENST00000304465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.17■■□□□ 1.78
SRGAP2C-201ENST00000304465 HNRNPUL2Q1KMD3 747 aaKnown RBP26.17■■□□□ 1.78
SRGAP2C-201ENST00000304465 RAPGEF6Q8TEU7 1601 aa26.16■■□□□ 1.78
SRGAP2C-201ENST00000304465 ATP10BO94823 1461 aa26.15■■□□□ 1.78
SRGAP2C-201ENST00000304465 TEX14Q8IWB6 1497 aa26.15■■□□□ 1.78
SRGAP2C-201ENST00000304465 AEBP2Q6ZN18 517 aaPredicted RBP26.14■■□□□ 1.78
SRGAP2C-201ENST00000304465 MAP3K4Q9Y6R4 1608 aa26.14■■□□□ 1.77
SRGAP2C-201ENST00000304465 PPRC1Q5VV67 1664 aaKnown RBP26.1■■□□□ 1.77
SRGAP2C-201ENST00000304465 CD109Q6YHK3 1445 aa26.1■■□□□ 1.77
SRGAP2C-201ENST00000304465 NUP153P49790 1475 aaKnown RBP26.05■■□□□ 1.76
SRGAP2C-201ENST00000304465 CFAP43Q8NDM7 1665 aa26.04■■□□□ 1.76
SRGAP2C-201ENST00000304465 MAGI3Q5TCQ9 1506 aa26.01■■□□□ 1.75
SRGAP2C-201ENST00000304465 PLEKHD1A6NEE1 506 aa26■■□□□ 1.75
SRGAP2C-201ENST00000304465 FMN1Q68DA7 1419 aa25.99■■□□□ 1.75
SRGAP2C-201ENST00000304465 ATP1B4Q9UN42 357 aaPredicted RBP25.98■■□□□ 1.75
SRGAP2C-201ENST00000304465 ARHGAP35Q9NRY4 1499 aa25.97■■□□□ 1.75
SRGAP2C-201ENST00000304465 COL17A1Q9UMD9 1497 aaPredicted RBP25.95■■□□□ 1.74
SRGAP2C-201ENST00000304465 ABCA9Q8IUA7 1624 aa25.91■■□□□ 1.74
SRGAP2C-201ENST00000304465 HECW1Q76N89 1606 aa25.86■■□□□ 1.73
SRGAP2C-201ENST00000304465 LOC105371045A0A1W2PR82 267 aa25.85■■□□□ 1.73
SRGAP2C-201ENST00000304465 CDK13Q14004 1512 aaKnown RBP25.85■■□□□ 1.73
SRGAP2C-201ENST00000304465 PHLDB1Q86UU1 1377 aa25.85■■□□□ 1.73
SRGAP2C-201ENST00000304465 CDK11AQ9UQ88 783 aaPredicted RBP25.85■■□□□ 1.73
SRGAP2C-201ENST00000304465 ARAP3Q8WWN8 1544 aa25.79■■□□□ 1.72
SRGAP2C-201ENST00000304465 NEO1Q92859 1461 aa25.79■■□□□ 1.72
SRGAP2C-201ENST00000304465 CLIP1P30622 1438 aa25.77■■□□□ 1.72
SRGAP2C-201ENST00000304465 KDM4FA0A1W2PPD8 638 aa25.77■■□□□ 1.72
SRGAP2C-201ENST00000304465 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.74■■□□□ 1.71
SRGAP2C-201ENST00000304465 CASKIN1Q8WXD9 1431 aa25.71■■□□□ 1.71
SRGAP2C-201ENST00000304465 RAPGEF3O95398 923 aa25.7■■□□□ 1.7
SRGAP2C-201ENST00000304465 FANCAO15360 1455 aa25.7■■□□□ 1.7
SRGAP2C-201ENST00000304465 TTC37Q6PGP7 1564 aa25.69■■□□□ 1.7
SRGAP2C-201ENST00000304465 ADGRL1O94910 1474 aa25.67■■□□□ 1.7
SRGAP2C-201ENST00000304465 PCF11O94913 1555 aaKnown RBP25.67■■□□□ 1.7
SRGAP2C-201ENST00000304465 CCDC18Q5T9S5 1454 aa25.67■■□□□ 1.7
SRGAP2C-201ENST00000304465 TROQ12816 1431 aaPredicted RBP25.66■■□□□ 1.7
SRGAP2C-201ENST00000304465 AKNAQ7Z591 1439 aa25.66■■□□□ 1.7
SRGAP2C-201ENST00000304465 CFAP74Q9C0B2 1584 aa25.66■■□□□ 1.7
SRGAP2C-201ENST00000304465 DENND4BO75064 1496 aaPredicted RBP25.63■■□□□ 1.69
SRGAP2C-201ENST00000304465 FYCO1Q9BQS8 1478 aa25.63■■□□□ 1.69
SRGAP2C-201ENST00000304465 KIF14Q15058 1648 aa25.62■■□□□ 1.69
SRGAP2C-201ENST00000304465 PLCH2O75038 1416 aa25.62■■□□□ 1.69
SRGAP2C-201ENST00000304465 EFCAB2Q5VUJ9 269 aa25.6■■□□□ 1.69
SRGAP2C-201ENST00000304465 LRRIQ1Q96JM4 1722 aa25.58■■□□□ 1.68
SRGAP2C-201ENST00000304465 CEP162Q5TB80 1403 aa25.55■■□□□ 1.68
SRGAP2C-201ENST00000304465 FRMPD1Q5SYB0 1578 aa25.54■■□□□ 1.68
SRGAP2C-201ENST00000304465 MYO5CQ9NQX4 1742 aa25.54■■□□□ 1.68
SRGAP2C-201ENST00000304465 SCAPERQ9BY12 1400 aa25.53■■□□□ 1.68
SRGAP2C-201ENST00000304465 ARHGAP5Q13017 1502 aa25.51■■□□□ 1.67
SRGAP2C-201ENST00000304465 ARID4BQ4LE39 1312 aaPredicted RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms